RNA–Protein interactions for RNA: ENST00000515198.5

PTCD2-210, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 5

Gene PTCD2, Length 881 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-210ENST00000515198 LTBP4Q8N2S1 1624 aa18.56■□□□□ 0.56
PTCD2-210ENST00000515198 ZNF335Q9H4Z2 1342 aaPredicted RBP18.55■□□□□ 0.56
PTCD2-210ENST00000515198 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
PTCD2-210ENST00000515198 CLTCL1P53675 1640 aa18.53■□□□□ 0.56
PTCD2-210ENST00000515198 RIMS2Q9UQ26 1411 aa18.53■□□□□ 0.56
PTCD2-210ENST00000515198 KIF1BO60333 1816 aa18.53■□□□□ 0.56
PTCD2-210ENST00000515198 ZFYVE9O95405 1425 aa18.52■□□□□ 0.56
PTCD2-210ENST00000515198 PPP1R15AO75807 674 aaPredicted RBP18.51■□□□□ 0.55
PTCD2-210ENST00000515198 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.51■□□□□ 0.55
PTCD2-210ENST00000515198 HRCP23327 699 aa18.49■□□□□ 0.55
PTCD2-210ENST00000515198 CPS1P31327 1500 aa18.49■□□□□ 0.55
PTCD2-210ENST00000515198 FBXO41Q8TF61 875 aa18.48■□□□□ 0.55
PTCD2-210ENST00000515198 BCANQ96GW7 911 aa18.48■□□□□ 0.55
PTCD2-210ENST00000515198 IQSEC2Q5JU85 1478 aa18.47■□□□□ 0.55
PTCD2-210ENST00000515198 PLEKHG1Q9ULL1 1385 aa18.47■□□□□ 0.55
PTCD2-210ENST00000515198 ZNF326Q5BKZ1 582 aaKnown RBP18.47■□□□□ 0.55
PTCD2-210ENST00000515198 CCDC144AA2RUR9 1427 aa18.45■□□□□ 0.54
PTCD2-210ENST00000515198 ILDR1Q86SU0 546 aaPredicted RBP18.44■□□□□ 0.54
PTCD2-210ENST00000515198 NUTM2DQ5VT03 806 aaPredicted RBP18.43■□□□□ 0.54
PTCD2-210ENST00000515198 SLC26A8Q96RN1 970 aa18.43■□□□□ 0.54
PTCD2-210ENST00000515198 STRCP1A6NGW2 1772 aa18.42■□□□□ 0.54
PTCD2-210ENST00000515198 NEXMIFQ5QGS0 1516 aa18.41■□□□□ 0.54
PTCD2-210ENST00000515198 DIP2AQ14689 1571 aa18.4■□□□□ 0.54
PTCD2-210ENST00000515198 POTEDQ86YR6 584 aa18.38■□□□□ 0.53
PTCD2-210ENST00000515198 TBX22Q9Y458 520 aa18.38■□□□□ 0.53
PTCD2-210ENST00000515198 RPGRIP1LQ68CZ1 1315 aa18.38■□□□□ 0.53
PTCD2-210ENST00000515198 VGFO15240 615 aaPredicted RBP18.36■□□□□ 0.53
PTCD2-210ENST00000515198 PPLO60437 1756 aa18.36■□□□□ 0.53
PTCD2-210ENST00000515198 KCNA6P17658 529 aa18.36■□□□□ 0.53
PTCD2-210ENST00000515198 ADAMTS13Q76LX8 1427 aa18.36■□□□□ 0.53
PTCD2-210ENST00000515198 LRRC7Q96NW7 1537 aa18.36■□□□□ 0.53
PTCD2-210ENST00000515198 CHD2O14647 1828 aaKnown RBP18.35■□□□□ 0.53
PTCD2-210ENST00000515198 NWD1Q149M9 1564 aa18.35■□□□□ 0.53
PTCD2-210ENST00000515198 SETBP1Q9Y6X0 1596 aa18.35■□□□□ 0.53
PTCD2-210ENST00000515198 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
PTCD2-210ENST00000515198 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
PTCD2-210ENST00000515198 NKTRP30414 1462 aaKnown RBP18.33■□□□□ 0.53
PTCD2-210ENST00000515198 SPATA31E1Q6ZUB1 1445 aa18.33■□□□□ 0.53
PTCD2-210ENST00000515198 PIK3R4Q99570 1358 aa18.32■□□□□ 0.52
PTCD2-210ENST00000515198 ANKRD30BQ9BXX2 1392 aa18.32■□□□□ 0.52
PTCD2-210ENST00000515198 UBAP1LF5GYI3 381 aa18.32■□□□□ 0.52
PTCD2-210ENST00000515198 RGL3Q3MIN7 710 aa18.32■□□□□ 0.52
PTCD2-210ENST00000515198 IFT172Q9UG01 1749 aa18.31■□□□□ 0.52
PTCD2-210ENST00000515198 PROSER2Q86WR7 435 aaPredicted RBP18.3■□□□□ 0.52
PTCD2-210ENST00000515198 XIRP1Q702N8 1843 aaKnown RBP18.3■□□□□ 0.52
PTCD2-210ENST00000515198 TOM1O60784 492 aa18.29■□□□□ 0.52
PTCD2-210ENST00000515198 TMEM94Q12767 1356 aa18.27■□□□□ 0.51
PTCD2-210ENST00000515198 ALKQ9UM73 1620 aa18.24■□□□□ 0.51
PTCD2-210ENST00000515198 XRN1Q8IZH2 1706 aaKnown RBP18.24■□□□□ 0.51
PTCD2-210ENST00000515198 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
PTCD2-210ENST00000515198 METP08581 1390 aa18.24■□□□□ 0.51
PTCD2-210ENST00000515198 PTPRUQ92729 1446 aa18.23■□□□□ 0.51
PTCD2-210ENST00000515198 SETD1AO15047 1707 aaKnown RBP18.23■□□□□ 0.51
PTCD2-210ENST00000515198 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
PTCD2-210ENST00000515198 SCAF1Q9H7N4 1312 aaKnown RBP18.22■□□□□ 0.51
PTCD2-210ENST00000515198 RBM33Q96EV2 1170 aaKnown RBP18.21■□□□□ 0.51
PTCD2-210ENST00000515198 NCOA3Q9Y6Q9 1424 aa18.21■□□□□ 0.51
PTCD2-210ENST00000515198 MYOM2P54296 1465 aa18.2■□□□□ 0.5
PTCD2-210ENST00000515198 MSH6P52701 1360 aa18.2■□□□□ 0.5
PTCD2-210ENST00000515198 PIP4K2BP78356 416 aa18.2■□□□□ 0.5
PTCD2-210ENST00000515198 PIK3C2GO75747 1445 aa18.19■□□□□ 0.5
PTCD2-210ENST00000515198 C14orf37Q86TY3 774 aa18.19■□□□□ 0.5
PTCD2-210ENST00000515198 LAMC1P11047 1609 aa18.17■□□□□ 0.5
PTCD2-210ENST00000515198 NRXN1Q9ULB1 1477 aa18.17■□□□□ 0.5
PTCD2-210ENST00000515198 STAC3Q96MF2 364 aa18.16■□□□□ 0.5
PTCD2-210ENST00000515198 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
PTCD2-210ENST00000515198 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
PTCD2-210ENST00000515198 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.14■□□□□ 0.49
PTCD2-210ENST00000515198 PTCH1Q13635 1447 aa18.14■□□□□ 0.49
PTCD2-210ENST00000515198 C19orf44Q9H6X5 657 aa18.13■□□□□ 0.49
PTCD2-210ENST00000515198 DHX57Q6P158 1386 aaKnown RBP18.13■□□□□ 0.49
PTCD2-210ENST00000515198 PRAG1Q86YV5 1406 aa18.13■□□□□ 0.49
PTCD2-210ENST00000515198 C14orf93Q9H972 538 aaKnown RBP18.12■□□□□ 0.49
PTCD2-210ENST00000515198 ATF3P18847 181 aa18.11■□□□□ 0.49
PTCD2-210ENST00000515198 KNDC1Q76NI1 1749 aa18.1■□□□□ 0.49
PTCD2-210ENST00000515198 ASXL1Q8IXJ9 1541 aa18.1■□□□□ 0.49
PTCD2-210ENST00000515198 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
PTCD2-210ENST00000515198 CFAP70Q5T0N1 1121 aa18.1■□□□□ 0.49
PTCD2-210ENST00000515198 CADPS2Q86UW7 1296 aa18.1■□□□□ 0.49
PTCD2-210ENST00000515198 DCCP43146 1447 aa18.09■□□□□ 0.49
PTCD2-210ENST00000515198 ADGRL3Q9HAR2 1447 aa18.09■□□□□ 0.49
PTCD2-210ENST00000515198 ROBO2Q9HCK4 1378 aa18.09■□□□□ 0.49
PTCD2-210ENST00000515198 TMEM132EQ6IEE7 984 aa18.09■□□□□ 0.49
PTCD2-210ENST00000515198 SLAIN2Q9P270 581 aa18.09■□□□□ 0.49
PTCD2-210ENST00000515198 NALCNQ8IZF0 1738 aa18.09■□□□□ 0.49
PTCD2-210ENST00000515198 FAM135BQ49AJ0 1406 aa18.08■□□□□ 0.49
PTCD2-210ENST00000515198 STK26Q9P289 416 aa18.08■□□□□ 0.48
PTCD2-210ENST00000515198 TECPR2O15040 1411 aa18.07■□□□□ 0.48
PTCD2-210ENST00000515198 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
PTCD2-210ENST00000515198 ABCC11Q96J66 1382 aa18.07■□□□□ 0.48
PTCD2-210ENST00000515198 ROBO1Q9Y6N7 1651 aa18.07■□□□□ 0.48
PTCD2-210ENST00000515198 HSPA1LP34931 641 aa18.07■□□□□ 0.48
PTCD2-210ENST00000515198 SIN3AQ96ST3 1273 aa18.05■□□□□ 0.48
PTCD2-210ENST00000515198 NEUROD1Q13562 356 aa18.04■□□□□ 0.48
PTCD2-210ENST00000515198 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
PTCD2-210ENST00000515198 ADGRB1O14514 1584 aa18.02■□□□□ 0.48
PTCD2-210ENST00000515198 KIAA1210Q9ULL0 1709 aa18.01■□□□□ 0.47
PTCD2-210ENST00000515198 SIRT1Q96EB6 747 aa18.01■□□□□ 0.47
PTCD2-210ENST00000515198 MST1RQ04912 1400 aa18■□□□□ 0.47
PTCD2-210ENST00000515198 DLC1Q96QB1 1528 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms