RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 PRAG1Q86YV5 1406 aa24.12■■□□□ 1.45
AP3S1-208ENST00000515066 KDM2AQ9Y2K7 1162 aa24.11■■□□□ 1.45
AP3S1-208ENST00000515066 NRXN1Q9ULB1 1477 aa24.1■■□□□ 1.45
AP3S1-208ENST00000515066 ZNF326Q5BKZ1 582 aaKnown RBP24.1■■□□□ 1.45
AP3S1-208ENST00000515066 TRPM1Q7Z4N2 1603 aa24.1■■□□□ 1.45
AP3S1-208ENST00000515066 RPGRIP1LQ68CZ1 1315 aa24.08■■□□□ 1.45
AP3S1-208ENST00000515066 ZFYVE9O95405 1425 aa24.08■■□□□ 1.44
AP3S1-208ENST00000515066 STAG3Q9UJ98 1225 aa24.07■■□□□ 1.44
AP3S1-208ENST00000515066 STAC3Q96MF2 364 aa24.06■■□□□ 1.44
AP3S1-208ENST00000515066 ADGRF5Q8IZF2 1346 aa24.05■■□□□ 1.44
AP3S1-208ENST00000515066 RALGAPBQ86X10 1494 aa24.04■■□□□ 1.44
AP3S1-208ENST00000515066 KIAA1210Q9ULL0 1709 aa24.04■■□□□ 1.44
AP3S1-208ENST00000515066 SLIT1O75093 1534 aa24.03■■□□□ 1.44
AP3S1-208ENST00000515066 PIK3C2GO75747 1445 aa24.03■■□□□ 1.44
AP3S1-208ENST00000515066 RIMS2Q9UQ26 1411 aa24.03■■□□□ 1.44
AP3S1-208ENST00000515066 TMEM2Q9UHN6 1383 aa24.03■■□□□ 1.44
AP3S1-208ENST00000515066 ARHGAP23Q9P227 1491 aa24.02■■□□□ 1.44
AP3S1-208ENST00000515066 NUTM2DQ5VT03 806 aaPredicted RBP24■■□□□ 1.43
AP3S1-208ENST00000515066 VGFO15240 615 aaPredicted RBP23.97■■□□□ 1.43
AP3S1-208ENST00000515066 NRXN3Q9Y4C0 1643 aa23.97■■□□□ 1.43
AP3S1-208ENST00000515066 LAMC1P11047 1609 aa23.96■■□□□ 1.43
AP3S1-208ENST00000515066 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
AP3S1-208ENST00000515066 THEMISQ8N1K5 641 aaPredicted RBP23.95■■□□□ 1.42
AP3S1-208ENST00000515066 GPRASP1Q5JY77 1395 aa23.94■■□□□ 1.42
AP3S1-208ENST00000515066 IQGAP1P46940 1657 aa23.94■■□□□ 1.42
AP3S1-208ENST00000515066 NBPF1Q3BBV0 1214 aa23.92■■□□□ 1.42
AP3S1-208ENST00000515066 SETBP1Q9Y6X0 1596 aa23.92■■□□□ 1.42
AP3S1-208ENST00000515066 LTKP29376 864 aa23.92■■□□□ 1.42
AP3S1-208ENST00000515066 ROCK2O75116 1388 aaKnown RBP23.91■■□□□ 1.42
AP3S1-208ENST00000515066 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.91■■□□□ 1.42
AP3S1-208ENST00000515066 ADGRB1O14514 1584 aa23.9■■□□□ 1.42
AP3S1-208ENST00000515066 ALKQ9UM73 1620 aa23.9■■□□□ 1.42
AP3S1-208ENST00000515066 POLR1AO95602 1720 aaPredicted RBP23.89■■□□□ 1.42
AP3S1-208ENST00000515066 CFAP70Q5T0N1 1121 aa23.89■■□□□ 1.42
AP3S1-208ENST00000515066 SCAF11Q99590 1463 aaKnown RBP23.89■■□□□ 1.42
AP3S1-208ENST00000515066 ASXL1Q8IXJ9 1541 aa23.89■■□□□ 1.42
AP3S1-208ENST00000515066 C14orf93Q9H972 538 aaKnown RBP23.89■■□□□ 1.41
AP3S1-208ENST00000515066 LMTK3Q96Q04 1460 aa23.88■■□□□ 1.41
AP3S1-208ENST00000515066 HDGFP51858 240 aaKnown RBP23.86■■□□□ 1.41
AP3S1-208ENST00000515066 PLEKHG1Q9ULL1 1385 aa23.86■■□□□ 1.41
AP3S1-208ENST00000515066 TXNDC2Q86VQ3 553 aa23.86■■□□□ 1.41
AP3S1-208ENST00000515066 CARD11Q9BXL7 1154 aa23.85■■□□□ 1.41
AP3S1-208ENST00000515066 SENP3Q9H4L4 574 aaPredicted RBP23.84■■□□□ 1.41
AP3S1-208ENST00000515066 EID1Q9Y6B2 187 aa23.83■■□□□ 1.41
AP3S1-208ENST00000515066 ADAMTS13Q76LX8 1427 aa23.83■■□□□ 1.41
AP3S1-208ENST00000515066 USP47Q96K76 1375 aa23.82■■□□□ 1.4
AP3S1-208ENST00000515066 MED14O60244 1454 aa23.81■■□□□ 1.4
AP3S1-208ENST00000515066 EIF4G2P78344 907 aaKnown RBP eCLIP23.78■■□□□ 1.4
AP3S1-208ENST00000515066 ARHGEF28Q8N1W1 1705 aaKnown RBP23.78■■□□□ 1.4
AP3S1-208ENST00000515066 DIP2AQ14689 1571 aa23.77■■□□□ 1.4
AP3S1-208ENST00000515066 HSPA5P11021 654 aaKnown RBP23.77■■□□□ 1.4
AP3S1-208ENST00000515066 TMEM132EQ6IEE7 984 aa23.77■■□□□ 1.4
AP3S1-208ENST00000515066 ANKLE2Q86XL3 938 aa23.77■■□□□ 1.4
AP3S1-208ENST00000515066 HIRIP3Q9BW71 556 aaPredicted RBP23.76■■□□□ 1.39
AP3S1-208ENST00000515066 STRCQ7RTU9 1775 aa23.75■■□□□ 1.39
AP3S1-208ENST00000515066 METP08581 1390 aa23.74■■□□□ 1.39
AP3S1-208ENST00000515066 HSPA2P54652 639 aa23.74■■□□□ 1.39
AP3S1-208ENST00000515066 KNDC1Q76NI1 1749 aa23.73■■□□□ 1.39
AP3S1-208ENST00000515066 YTHDC2Q9H6S0 1430 aaKnown RBP23.72■■□□□ 1.39
AP3S1-208ENST00000515066 NPHP4O75161 1426 aaPredicted RBP23.71■■□□□ 1.39
AP3S1-208ENST00000515066 ZNF316A6NFI3 1004 aaPredicted RBP23.7■■□□□ 1.39
AP3S1-208ENST00000515066 SLC26A8Q96RN1 970 aa23.7■■□□□ 1.39
AP3S1-208ENST00000515066 BCANQ96GW7 911 aa23.7■■□□□ 1.38
AP3S1-208ENST00000515066 NCKAP5LQ9HCH0 1330 aa23.7■■□□□ 1.38
AP3S1-208ENST00000515066 ST20-MTHFSA0A0A6YYL1 179 aa23.69■■□□□ 1.38
AP3S1-208ENST00000515066 TBX22Q9Y458 520 aa23.68■■□□□ 1.38
AP3S1-208ENST00000515066 CHD2O14647 1828 aaKnown RBP23.68■■□□□ 1.38
AP3S1-208ENST00000515066 QRICH2Q9H0J4 1663 aa23.68■■□□□ 1.38
AP3S1-208ENST00000515066 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
AP3S1-208ENST00000515066 XRN1Q8IZH2 1706 aaKnown RBP23.66■■□□□ 1.38
AP3S1-208ENST00000515066 DLC1Q96QB1 1528 aa23.66■■□□□ 1.38
AP3S1-208ENST00000515066 PTPRUQ92729 1446 aa23.66■■□□□ 1.38
AP3S1-208ENST00000515066 EIF3AQ14152 1382 aaKnown RBP23.66■■□□□ 1.38
AP3S1-208ENST00000515066 TRAK1Q9UPV9 953 aa23.66■■□□□ 1.38
AP3S1-208ENST00000515066 CPS1P31327 1500 aa23.66■■□□□ 1.38
AP3S1-208ENST00000515066 TECPR2O15040 1411 aa23.65■■□□□ 1.38
AP3S1-208ENST00000515066 ABCC11Q96J66 1382 aa23.64■■□□□ 1.37
AP3S1-208ENST00000515066 TESK2Q96S53 571 aa23.64■■□□□ 1.37
AP3S1-208ENST00000515066 STK26Q9P289 416 aa23.63■■□□□ 1.37
AP3S1-208ENST00000515066 PIK3R4Q99570 1358 aa23.62■■□□□ 1.37
AP3S1-208ENST00000515066 C11orf95C9JLR9 678 aaPredicted RBP23.59■■□□□ 1.37
AP3S1-208ENST00000515066 SBNO2Q9Y2G9 1366 aa23.59■■□□□ 1.37
AP3S1-208ENST00000515066 CENPJQ9HC77 1338 aaPredicted RBP23.59■■□□□ 1.37
AP3S1-208ENST00000515066 NWD1Q149M9 1564 aa23.57■■□□□ 1.36
AP3S1-208ENST00000515066 ROBO2Q9HCK4 1378 aa23.56■■□□□ 1.36
AP3S1-208ENST00000515066 PTCH1Q13635 1447 aa23.56■■□□□ 1.36
AP3S1-208ENST00000515066 FAM135BQ49AJ0 1406 aa23.56■■□□□ 1.36
AP3S1-208ENST00000515066 STRCP1A6NGW2 1772 aa23.55■■□□□ 1.36
AP3S1-208ENST00000515066 WASHC2AQ641Q2 1341 aa23.55■■□□□ 1.36
AP3S1-208ENST00000515066 DISP3Q9P2K9 1392 aa23.55■■□□□ 1.36
AP3S1-208ENST00000515066 PLEKHH1Q9ULM0 1364 aa23.55■■□□□ 1.36
AP3S1-208ENST00000515066 PRAM1Q96QH2 718 aa23.54■■□□□ 1.36
AP3S1-208ENST00000515066 AMOTL2Q9Y2J4 779 aa23.54■■□□□ 1.36
AP3S1-208ENST00000515066 SIRT1Q96EB6 747 aa23.52■■□□□ 1.36
AP3S1-208ENST00000515066 CCDC7Q96M83 1385 aa23.52■■□□□ 1.36
AP3S1-208ENST00000515066 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.52■■□□□ 1.36
AP3S1-208ENST00000515066 TULP4Q9NRJ4 1543 aa23.52■■□□□ 1.35
AP3S1-208ENST00000515066 WAPLQ7Z5K2 1190 aa23.51■■□□□ 1.35
AP3S1-208ENST00000515066 KIF7Q2M1P5 1343 aa23.51■■□□□ 1.35
AP3S1-208ENST00000515066 KCNA6P17658 529 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms