RNA–Protein interactions for RNA: ENST00000514834.1

ITGA3-214, Transcript of integrin subunit alpha 3, humanhuman

TSL 1 (best)

Gene ITGA3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-214ENST00000514834 RIMS2Q9UQ26 1411 aa20.94■□□□□ 0.94
ITGA3-214ENST00000514834 LRRC7Q96NW7 1537 aa20.94■□□□□ 0.94
ITGA3-214ENST00000514834 SPHKAPQ2M3C7 1700 aa20.93■□□□□ 0.94
ITGA3-214ENST00000514834 NUTM2DQ5VT03 806 aaPredicted RBP20.93■□□□□ 0.94
ITGA3-214ENST00000514834 TRIM52Q96A61 297 aa20.93■□□□□ 0.94
ITGA3-214ENST00000514834 ALKQ9UM73 1620 aa20.89■□□□□ 0.94
ITGA3-214ENST00000514834 BCANQ96GW7 911 aa20.88■□□□□ 0.93
ITGA3-214ENST00000514834 XIRP1Q702N8 1843 aaKnown RBP20.88■□□□□ 0.93
ITGA3-214ENST00000514834 PLEKHG1Q9ULL1 1385 aa20.86■□□□□ 0.93
ITGA3-214ENST00000514834 CLTCL1P53675 1640 aa20.86■□□□□ 0.93
ITGA3-214ENST00000514834 PPP1R15AO75807 674 aaPredicted RBP20.86■□□□□ 0.93
ITGA3-214ENST00000514834 PIP4K2BP78356 416 aa20.86■□□□□ 0.93
ITGA3-214ENST00000514834 RBM33Q96EV2 1170 aaKnown RBP20.85■□□□□ 0.93
ITGA3-214ENST00000514834 KCNA6P17658 529 aa20.84■□□□□ 0.93
ITGA3-214ENST00000514834 FOXD1Q16676 465 aa20.84■□□□□ 0.93
ITGA3-214ENST00000514834 SLC4A1APQ9BWU0 796 aaKnown RBP20.84■□□□□ 0.93
ITGA3-214ENST00000514834 TRPM2O94759 1503 aa20.83■□□□□ 0.93
ITGA3-214ENST00000514834 SCAF1Q9H7N4 1312 aaKnown RBP20.82■□□□□ 0.92
ITGA3-214ENST00000514834 TOM1O60784 492 aa20.82■□□□□ 0.92
ITGA3-214ENST00000514834 HDGFP51858 240 aaKnown RBP20.82■□□□□ 0.92
ITGA3-214ENST00000514834 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.82■□□□□ 0.92
ITGA3-214ENST00000514834 ADAMTS13Q76LX8 1427 aa20.81■□□□□ 0.92
ITGA3-214ENST00000514834 CHD2O14647 1828 aaKnown RBP20.79■□□□□ 0.92
ITGA3-214ENST00000514834 NWD1Q149M9 1564 aa20.78■□□□□ 0.92
ITGA3-214ENST00000514834 TMEM94Q12767 1356 aa20.78■□□□□ 0.92
ITGA3-214ENST00000514834 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
ITGA3-214ENST00000514834 PROSER2Q86WR7 435 aaPredicted RBP20.78■□□□□ 0.92
ITGA3-214ENST00000514834 TBX22Q9Y458 520 aa20.78■□□□□ 0.92
ITGA3-214ENST00000514834 HSPA1LP34931 641 aa20.77■□□□□ 0.92
ITGA3-214ENST00000514834 KIF1BO60333 1816 aa20.76■□□□□ 0.91
ITGA3-214ENST00000514834 MPHOSPH9Q99550 1183 aa20.76■□□□□ 0.91
ITGA3-214ENST00000514834 SETD5Q9C0A6 1442 aa20.76■□□□□ 0.91
ITGA3-214ENST00000514834 NRXN3Q9Y4C0 1643 aa20.75■□□□□ 0.91
ITGA3-214ENST00000514834 NEXMIFQ5QGS0 1516 aa20.74■□□□□ 0.91
ITGA3-214ENST00000514834 NKTRP30414 1462 aaKnown RBP20.73■□□□□ 0.91
ITGA3-214ENST00000514834 PTPRUQ92729 1446 aa20.71■□□□□ 0.91
ITGA3-214ENST00000514834 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
ITGA3-214ENST00000514834 DIP2AQ14689 1571 aa20.7■□□□□ 0.9
ITGA3-214ENST00000514834 SETBP1Q9Y6X0 1596 aa20.69■□□□□ 0.9
ITGA3-214ENST00000514834 METP08581 1390 aa20.68■□□□□ 0.9
ITGA3-214ENST00000514834 AMOTL2Q9Y2J4 779 aa20.67■□□□□ 0.9
ITGA3-214ENST00000514834 PIK3R4Q99570 1358 aa20.65■□□□□ 0.9
ITGA3-214ENST00000514834 PPLO60437 1756 aa20.64■□□□□ 0.89
ITGA3-214ENST00000514834 RGL3Q3MIN7 710 aa20.63■□□□□ 0.89
ITGA3-214ENST00000514834 CCDC144AA2RUR9 1427 aa20.62■□□□□ 0.89
ITGA3-214ENST00000514834 XRN1Q8IZH2 1706 aaKnown RBP20.62■□□□□ 0.89
ITGA3-214ENST00000514834 SPATA31E1Q6ZUB1 1445 aa20.61■□□□□ 0.89
ITGA3-214ENST00000514834 MSH6P52701 1360 aa20.61■□□□□ 0.89
ITGA3-214ENST00000514834 RPGRIP1LQ68CZ1 1315 aa20.6■□□□□ 0.89
ITGA3-214ENST00000514834 VGFO15240 615 aaPredicted RBP20.6■□□□□ 0.89
ITGA3-214ENST00000514834 SETD1AO15047 1707 aaKnown RBP20.6■□□□□ 0.89
ITGA3-214ENST00000514834 FAM135BQ49AJ0 1406 aa20.59■□□□□ 0.89
ITGA3-214ENST00000514834 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.58■□□□□ 0.89
ITGA3-214ENST00000514834 ROBO1Q9Y6N7 1651 aa20.58■□□□□ 0.89
ITGA3-214ENST00000514834 C14orf37Q86TY3 774 aa20.58■□□□□ 0.89
ITGA3-214ENST00000514834 SLAIN2Q9P270 581 aa20.58■□□□□ 0.89
ITGA3-214ENST00000514834 ADGRF5Q8IZF2 1346 aa20.57■□□□□ 0.88
ITGA3-214ENST00000514834 NCOA3Q9Y6Q9 1424 aa20.56■□□□□ 0.88
ITGA3-214ENST00000514834 IFT172Q9UG01 1749 aa20.56■□□□□ 0.88
ITGA3-214ENST00000514834 C19orf44Q9H6X5 657 aa20.55■□□□□ 0.88
ITGA3-214ENST00000514834 ACIN1Q9UKV3 1341 aaKnown RBP20.54■□□□□ 0.88
ITGA3-214ENST00000514834 MED1Q15648 1581 aaPredicted RBP20.52■□□□□ 0.88
ITGA3-214ENST00000514834 ANKRD30BQ9BXX2 1392 aa20.51■□□□□ 0.87
ITGA3-214ENST00000514834 ROBO2Q9HCK4 1378 aa20.5■□□□□ 0.87
ITGA3-214ENST00000514834 HRCP23327 699 aa20.5■□□□□ 0.87
ITGA3-214ENST00000514834 ATF3P18847 181 aa20.49■□□□□ 0.87
ITGA3-214ENST00000514834 NALCNQ8IZF0 1738 aa20.48■□□□□ 0.87
ITGA3-214ENST00000514834 CADPS2Q86UW7 1296 aa20.48■□□□□ 0.87
ITGA3-214ENST00000514834 TMEM132EQ6IEE7 984 aa20.46■□□□□ 0.87
ITGA3-214ENST00000514834 PHLPP1O60346 1717 aa20.45■□□□□ 0.86
ITGA3-214ENST00000514834 ASXL1Q8IXJ9 1541 aa20.45■□□□□ 0.86
ITGA3-214ENST00000514834 PIK3C2GO75747 1445 aa20.44■□□□□ 0.86
ITGA3-214ENST00000514834 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
ITGA3-214ENST00000514834 PTCH1Q13635 1447 aa20.44■□□□□ 0.86
ITGA3-214ENST00000514834 BRINP3Q76B58 766 aa20.43■□□□□ 0.86
ITGA3-214ENST00000514834 STK26Q9P289 416 aa20.43■□□□□ 0.86
ITGA3-214ENST00000514834 DCCP43146 1447 aa20.43■□□□□ 0.86
ITGA3-214ENST00000514834 MST1RQ04912 1400 aa20.43■□□□□ 0.86
ITGA3-214ENST00000514834 PRAG1Q86YV5 1406 aa20.42■□□□□ 0.86
ITGA3-214ENST00000514834 COL16A1Q07092 1604 aaPredicted RBP20.41■□□□□ 0.86
ITGA3-214ENST00000514834 CFAP70Q5T0N1 1121 aa20.4■□□□□ 0.86
ITGA3-214ENST00000514834 NRXN1Q9ULB1 1477 aa20.4■□□□□ 0.86
ITGA3-214ENST00000514834 WAPLQ7Z5K2 1190 aa20.39■□□□□ 0.85
ITGA3-214ENST00000514834 C14orf93Q9H972 538 aaKnown RBP20.39■□□□□ 0.85
ITGA3-214ENST00000514834 MYOM2P54296 1465 aa20.38■□□□□ 0.85
ITGA3-214ENST00000514834 LRPPRCP42704 1394 aaKnown RBP20.37■□□□□ 0.85
ITGA3-214ENST00000514834 DDX17Q92841 729 aaKnown RBP20.37■□□□□ 0.85
ITGA3-214ENST00000514834 KDM2AQ9Y2K7 1162 aa20.37■□□□□ 0.85
ITGA3-214ENST00000514834 AHDC1Q5TGY3 1603 aaPredicted RBP20.37■□□□□ 0.85
ITGA3-214ENST00000514834 PLEKHH1Q9ULM0 1364 aa20.36■□□□□ 0.85
ITGA3-214ENST00000514834 TECPR2O15040 1411 aa20.36■□□□□ 0.85
ITGA3-214ENST00000514834 ABCC11Q96J66 1382 aa20.35■□□□□ 0.85
ITGA3-214ENST00000514834 YTHDC2Q9H6S0 1430 aaKnown RBP20.35■□□□□ 0.85
ITGA3-214ENST00000514834 DHX57Q6P158 1386 aaKnown RBP20.34■□□□□ 0.85
ITGA3-214ENST00000514834 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
ITGA3-214ENST00000514834 RGS17Q9UGC6 210 aaPredicted RBP20.34■□□□□ 0.85
ITGA3-214ENST00000514834 C1orf167Q5SNV9 1468 aa20.34■□□□□ 0.85
ITGA3-214ENST00000514834 ORAI2Q96SN7 254 aa20.33■□□□□ 0.85
ITGA3-214ENST00000514834 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
ITGA3-214ENST00000514834 KNDC1Q76NI1 1749 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms