RNA–Protein interactions for RNA: ENST00000514773.1

PCDH1-207, Transcript of protocadherin 1, humanhuman

TSL 4

Gene PCDH1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-207ENST00000514773 KIF1BO60333 1816 aa26.37■■□□□ 1.81
PCDH1-207ENST00000514773 RIMS2Q9UQ26 1411 aa26.37■■□□□ 1.81
PCDH1-207ENST00000514773 MYO5BQ9ULV0 1848 aa26.36■■□□□ 1.81
PCDH1-207ENST00000514773 IQGAP1P46940 1657 aa26.35■■□□□ 1.81
PCDH1-207ENST00000514773 ZFYVE9O95405 1425 aa26.35■■□□□ 1.81
PCDH1-207ENST00000514773 BCANQ96GW7 911 aa26.31■■□□□ 1.8
PCDH1-207ENST00000514773 RPGRIP1LQ68CZ1 1315 aa26.3■■□□□ 1.8
PCDH1-207ENST00000514773 PLEKHG1Q9ULL1 1385 aa26.29■■□□□ 1.8
PCDH1-207ENST00000514773 ANKRD30BQ9BXX2 1392 aa26.28■■□□□ 1.8
PCDH1-207ENST00000514773 VGFO15240 615 aaPredicted RBP26.24■■□□□ 1.79
PCDH1-207ENST00000514773 ZNF335Q9H4Z2 1342 aaPredicted RBP26.23■■□□□ 1.79
PCDH1-207ENST00000514773 NUTM2DQ5VT03 806 aaPredicted RBP26.23■■□□□ 1.79
PCDH1-207ENST00000514773 SPATA31E1Q6ZUB1 1445 aa26.21■■□□□ 1.79
PCDH1-207ENST00000514773 NEXMIFQ5QGS0 1516 aa26.2■■□□□ 1.79
PCDH1-207ENST00000514773 RGL3Q3MIN7 710 aa26.2■■□□□ 1.78
PCDH1-207ENST00000514773 SLC26A8Q96RN1 970 aa26.2■■□□□ 1.78
PCDH1-207ENST00000514773 CERKQ8TCT0 537 aa26.18■■□□□ 1.78
PCDH1-207ENST00000514773 PCGF6Q9BYE7 350 aa26.18■■□□□ 1.78
PCDH1-207ENST00000514773 TBX22Q9Y458 520 aa26.18■■□□□ 1.78
PCDH1-207ENST00000514773 LTBP4Q8N2S1 1624 aa26.17■■□□□ 1.78
PCDH1-207ENST00000514773 CPS1P31327 1500 aa26.16■■□□□ 1.78
PCDH1-207ENST00000514773 DIP2AQ14689 1571 aa26.16■■□□□ 1.78
PCDH1-207ENST00000514773 SENP3Q9H4L4 574 aaPredicted RBP26.13■■□□□ 1.77
PCDH1-207ENST00000514773 PPLO60437 1756 aa26.12■■□□□ 1.77
PCDH1-207ENST00000514773 SETBP1Q9Y6X0 1596 aa26.12■■□□□ 1.77
PCDH1-207ENST00000514773 PIK3R4Q99570 1358 aa26.11■■□□□ 1.77
PCDH1-207ENST00000514773 KCNA6P17658 529 aa26.11■■□□□ 1.77
PCDH1-207ENST00000514773 DHX57Q6P158 1386 aaKnown RBP26.1■■□□□ 1.77
PCDH1-207ENST00000514773 ADAMTS13Q76LX8 1427 aa26.1■■□□□ 1.77
PCDH1-207ENST00000514773 IQSEC2Q5JU85 1478 aa26.1■■□□□ 1.77
PCDH1-207ENST00000514773 STAC3Q96MF2 364 aa26.09■■□□□ 1.77
PCDH1-207ENST00000514773 IFT172Q9UG01 1749 aa26.05■■□□□ 1.76
PCDH1-207ENST00000514773 NRXN3Q9Y4C0 1643 aa26.03■■□□□ 1.76
PCDH1-207ENST00000514773 ADGRF5Q8IZF2 1346 aa26.02■■□□□ 1.76
PCDH1-207ENST00000514773 NKTRP30414 1462 aaKnown RBP26.02■■□□□ 1.76
PCDH1-207ENST00000514773 MYOM2P54296 1465 aa26.02■■□□□ 1.76
PCDH1-207ENST00000514773 NWD1Q149M9 1564 aa26.01■■□□□ 1.75
PCDH1-207ENST00000514773 DCAF11Q8TEB1 546 aa26.01■■□□□ 1.75
PCDH1-207ENST00000514773 CHD2O14647 1828 aaKnown RBP26■■□□□ 1.75
PCDH1-207ENST00000514773 STRCP1A6NGW2 1772 aa26■■□□□ 1.75
PCDH1-207ENST00000514773 PROSER2Q86WR7 435 aaPredicted RBP25.99■■□□□ 1.75
PCDH1-207ENST00000514773 LRRC7Q96NW7 1537 aa25.98■■□□□ 1.75
PCDH1-207ENST00000514773 AMOTL2Q9Y2J4 779 aa25.98■■□□□ 1.75
PCDH1-207ENST00000514773 ALKQ9UM73 1620 aa25.98■■□□□ 1.75
PCDH1-207ENST00000514773 PIK3C2GO75747 1445 aa25.97■■□□□ 1.75
PCDH1-207ENST00000514773 FBXO41Q8TF61 875 aa25.97■■□□□ 1.75
PCDH1-207ENST00000514773 METP08581 1390 aa25.96■■□□□ 1.75
PCDH1-207ENST00000514773 KDM2AQ9Y2K7 1162 aa25.96■■□□□ 1.75
PCDH1-207ENST00000514773 NRXN1Q9ULB1 1477 aa25.96■■□□□ 1.75
PCDH1-207ENST00000514773 NEUROD1Q13562 356 aa25.94■■□□□ 1.74
PCDH1-207ENST00000514773 SIN3AQ96ST3 1273 aa25.93■■□□□ 1.74
PCDH1-207ENST00000514773 TMEM94Q12767 1356 aa25.92■■□□□ 1.74
PCDH1-207ENST00000514773 NCOA3Q9Y6Q9 1424 aa25.91■■□□□ 1.74
PCDH1-207ENST00000514773 C14orf93Q9H972 538 aaKnown RBP25.91■■□□□ 1.74
PCDH1-207ENST00000514773 PTPRUQ92729 1446 aa25.9■■□□□ 1.74
PCDH1-207ENST00000514773 LAMC1P11047 1609 aa25.9■■□□□ 1.74
PCDH1-207ENST00000514773 TOM1O60784 492 aa25.9■■□□□ 1.74
PCDH1-207ENST00000514773 SETD1AO15047 1707 aaKnown RBP25.89■■□□□ 1.74
PCDH1-207ENST00000514773 UBAP1LF5GYI3 381 aa25.89■■□□□ 1.74
PCDH1-207ENST00000514773 XRN1Q8IZH2 1706 aaKnown RBP25.88■■□□□ 1.73
PCDH1-207ENST00000514773 CLSPNQ9HAW4 1339 aa25.87■■□□□ 1.73
PCDH1-207ENST00000514773 C14orf37Q86TY3 774 aa25.86■■□□□ 1.73
PCDH1-207ENST00000514773 CFAP70Q5T0N1 1121 aa25.85■■□□□ 1.73
PCDH1-207ENST00000514773 L3MBTL2Q969R5 705 aa25.85■■□□□ 1.73
PCDH1-207ENST00000514773 MSH6P52701 1360 aa25.84■■□□□ 1.73
PCDH1-207ENST00000514773 PTCH1Q13635 1447 aa25.84■■□□□ 1.73
PCDH1-207ENST00000514773 PRAG1Q86YV5 1406 aa25.83■■□□□ 1.73
PCDH1-207ENST00000514773 TMEM132EQ6IEE7 984 aa25.82■■□□□ 1.72
PCDH1-207ENST00000514773 RBM33Q96EV2 1170 aaKnown RBP25.82■■□□□ 1.72
PCDH1-207ENST00000514773 LRPPRCP42704 1394 aaKnown RBP25.82■■□□□ 1.72
PCDH1-207ENST00000514773 TONSLQ96HA7 1378 aa25.82■■□□□ 1.72
PCDH1-207ENST00000514773 XIRP1Q702N8 1843 aaKnown RBP25.81■■□□□ 1.72
PCDH1-207ENST00000514773 C19orf44Q9H6X5 657 aa25.8■■□□□ 1.72
PCDH1-207ENST00000514773 ABCC11Q96J66 1382 aa25.8■■□□□ 1.72
PCDH1-207ENST00000514773 YTHDC2Q9H6S0 1430 aaKnown RBP25.8■■□□□ 1.72
PCDH1-207ENST00000514773 ILDR1Q86SU0 546 aaPredicted RBP25.79■■□□□ 1.72
PCDH1-207ENST00000514773 STK26Q9P289 416 aa25.79■■□□□ 1.72
PCDH1-207ENST00000514773 TECPR2O15040 1411 aa25.78■■□□□ 1.72
PCDH1-207ENST00000514773 CCER1Q8TC90 406 aaPredicted RBP25.77■■□□□ 1.72
PCDH1-207ENST00000514773 ATF3P18847 181 aa25.76■■□□□ 1.71
PCDH1-207ENST00000514773 SIRT1Q96EB6 747 aa25.76■■□□□ 1.71
PCDH1-207ENST00000514773 ROBO2Q9HCK4 1378 aa25.76■■□□□ 1.71
PCDH1-207ENST00000514773 ASXL1Q8IXJ9 1541 aa25.75■■□□□ 1.71
PCDH1-207ENST00000514773 CADPS2Q86UW7 1296 aa25.75■■□□□ 1.71
PCDH1-207ENST00000514773 SCAF1Q9H7N4 1312 aaKnown RBP25.74■■□□□ 1.71
PCDH1-207ENST00000514773 PIP4K2BP78356 416 aa25.73■■□□□ 1.71
PCDH1-207ENST00000514773 KNDC1Q76NI1 1749 aa25.73■■□□□ 1.71
PCDH1-207ENST00000514773 KIAA1210Q9ULL0 1709 aa25.73■■□□□ 1.71
PCDH1-207ENST00000514773 DCCP43146 1447 aa25.72■■□□□ 1.71
PCDH1-207ENST00000514773 ADGRB1O14514 1584 aa25.72■■□□□ 1.71
PCDH1-207ENST00000514773 FAM135BQ49AJ0 1406 aa25.71■■□□□ 1.71
PCDH1-207ENST00000514773 ADGRL3Q9HAR2 1447 aa25.71■■□□□ 1.71
PCDH1-207ENST00000514773 TIMELESSQ9UNS1 1208 aa25.7■■□□□ 1.7
PCDH1-207ENST00000514773 SLAIN2Q9P270 581 aa25.68■■□□□ 1.7
PCDH1-207ENST00000514773 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.68■■□□□ 1.7
PCDH1-207ENST00000514773 DLC1Q96QB1 1528 aa25.68■■□□□ 1.7
PCDH1-207ENST00000514773 POGKQ9P215 609 aa25.67■■□□□ 1.7
PCDH1-207ENST00000514773 WAPLQ7Z5K2 1190 aa25.66■■□□□ 1.7
PCDH1-207ENST00000514773 TRAK1Q9UPV9 953 aa25.66■■□□□ 1.7
PCDH1-207ENST00000514773 PRAM1Q96QH2 718 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms