RNA–Protein interactions for RNA: ENST00000514682.5

RPS3A-212, Transcript of ribosomal protein S3A, humanhuman

TSL 5 BASIC

Gene RPS3A, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-212ENST00000514682 PPP1R15AO75807 674 aaPredicted RBP24.44■■□□□ 1.5
RPS3A-212ENST00000514682 CPS1P31327 1500 aa24.44■■□□□ 1.5
RPS3A-212ENST00000514682 PLEKHG1Q9ULL1 1385 aa24.43■■□□□ 1.5
RPS3A-212ENST00000514682 IQSEC2Q5JU85 1478 aa24.43■■□□□ 1.5
RPS3A-212ENST00000514682 HDGFP51858 240 aaKnown RBP24.42■■□□□ 1.5
RPS3A-212ENST00000514682 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.42■■□□□ 1.5
RPS3A-212ENST00000514682 KIF1BO60333 1816 aa24.42■■□□□ 1.5
RPS3A-212ENST00000514682 FBXO41Q8TF61 875 aa24.4■■□□□ 1.5
RPS3A-212ENST00000514682 CCDC144AA2RUR9 1427 aa24.4■■□□□ 1.5
RPS3A-212ENST00000514682 HRCP23327 699 aa24.38■■□□□ 1.49
RPS3A-212ENST00000514682 ZNF326Q5BKZ1 582 aaKnown RBP24.38■■□□□ 1.49
RPS3A-212ENST00000514682 NEXMIFQ5QGS0 1516 aa24.37■■□□□ 1.49
RPS3A-212ENST00000514682 ILDR1Q86SU0 546 aaPredicted RBP24.37■■□□□ 1.49
RPS3A-212ENST00000514682 BCANQ96GW7 911 aa24.37■■□□□ 1.49
RPS3A-212ENST00000514682 NUTM2DQ5VT03 806 aaPredicted RBP24.36■■□□□ 1.49
RPS3A-212ENST00000514682 STRCP1A6NGW2 1772 aa24.36■■□□□ 1.49
RPS3A-212ENST00000514682 SLC26A8Q96RN1 970 aa24.35■■□□□ 1.49
RPS3A-212ENST00000514682 DIP2AQ14689 1571 aa24.34■■□□□ 1.49
RPS3A-212ENST00000514682 SENP3Q9H4L4 574 aaPredicted RBP24.34■■□□□ 1.49
RPS3A-212ENST00000514682 NWD1Q149M9 1564 aa24.31■■□□□ 1.48
RPS3A-212ENST00000514682 ADAMTS13Q76LX8 1427 aa24.31■■□□□ 1.48
RPS3A-212ENST00000514682 SETBP1Q9Y6X0 1596 aa24.31■■□□□ 1.48
RPS3A-212ENST00000514682 LRRC7Q96NW7 1537 aa24.3■■□□□ 1.48
RPS3A-212ENST00000514682 SPATA31E1Q6ZUB1 1445 aa24.29■■□□□ 1.48
RPS3A-212ENST00000514682 NRXN3Q9Y4C0 1643 aa24.28■■□□□ 1.48
RPS3A-212ENST00000514682 NKTRP30414 1462 aaKnown RBP24.27■■□□□ 1.48
RPS3A-212ENST00000514682 RPGRIP1LQ68CZ1 1315 aa24.26■■□□□ 1.47
RPS3A-212ENST00000514682 PPLO60437 1756 aa24.25■■□□□ 1.47
RPS3A-212ENST00000514682 KCNA6P17658 529 aa24.25■■□□□ 1.47
RPS3A-212ENST00000514682 TBX22Q9Y458 520 aa24.25■■□□□ 1.47
RPS3A-212ENST00000514682 ANKRD30BQ9BXX2 1392 aa24.24■■□□□ 1.47
RPS3A-212ENST00000514682 PIK3R4Q99570 1358 aa24.23■■□□□ 1.47
RPS3A-212ENST00000514682 CHD2O14647 1828 aaKnown RBP24.21■■□□□ 1.47
RPS3A-212ENST00000514682 VGFO15240 615 aaPredicted RBP24.2■■□□□ 1.46
RPS3A-212ENST00000514682 TRIM26Q12899 539 aaPredicted RBP24.2■■□□□ 1.46
RPS3A-212ENST00000514682 IFT172Q9UG01 1749 aa24.2■■□□□ 1.46
RPS3A-212ENST00000514682 UBAP1LF5GYI3 381 aa24.19■■□□□ 1.46
RPS3A-212ENST00000514682 RGL3Q3MIN7 710 aa24.18■■□□□ 1.46
RPS3A-212ENST00000514682 TMEM94Q12767 1356 aa24.17■■□□□ 1.46
RPS3A-212ENST00000514682 XIRP1Q702N8 1843 aaKnown RBP24.16■■□□□ 1.46
RPS3A-212ENST00000514682 PTPRUQ92729 1446 aa24.15■■□□□ 1.46
RPS3A-212ENST00000514682 XRN1Q8IZH2 1706 aaKnown RBP24.15■■□□□ 1.46
RPS3A-212ENST00000514682 SETD1AO15047 1707 aaKnown RBP24.14■■□□□ 1.45
RPS3A-212ENST00000514682 PROSER2Q86WR7 435 aaPredicted RBP24.14■■□□□ 1.45
RPS3A-212ENST00000514682 METP08581 1390 aa24.14■■□□□ 1.45
RPS3A-212ENST00000514682 ALKQ9UM73 1620 aa24.13■■□□□ 1.45
RPS3A-212ENST00000514682 MYOM2P54296 1465 aa24.12■■□□□ 1.45
RPS3A-212ENST00000514682 ADGRF5Q8IZF2 1346 aa24.1■■□□□ 1.45
RPS3A-212ENST00000514682 TOM1O60784 492 aa24.1■■□□□ 1.45
RPS3A-212ENST00000514682 PIK3C2GO75747 1445 aa24.1■■□□□ 1.45
RPS3A-212ENST00000514682 AMOTL2Q9Y2J4 779 aa24.09■■□□□ 1.45
RPS3A-212ENST00000514682 RBM33Q96EV2 1170 aaKnown RBP24.08■■□□□ 1.45
RPS3A-212ENST00000514682 NRXN1Q9ULB1 1477 aa24.07■■□□□ 1.44
RPS3A-212ENST00000514682 MSH6P52701 1360 aa24.05■■□□□ 1.44
RPS3A-212ENST00000514682 NCOA3Q9Y6Q9 1424 aa24.05■■□□□ 1.44
RPS3A-212ENST00000514682 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
RPS3A-212ENST00000514682 PIP4K2BP78356 416 aa24.04■■□□□ 1.44
RPS3A-212ENST00000514682 PTCH1Q13635 1447 aa24.02■■□□□ 1.44
RPS3A-212ENST00000514682 PRAG1Q86YV5 1406 aa24.02■■□□□ 1.44
RPS3A-212ENST00000514682 ASXL1Q8IXJ9 1541 aa24.02■■□□□ 1.44
RPS3A-212ENST00000514682 LAMC1P11047 1609 aa24.02■■□□□ 1.44
RPS3A-212ENST00000514682 DHX57Q6P158 1386 aaKnown RBP24.01■■□□□ 1.43
RPS3A-212ENST00000514682 C14orf37Q86TY3 774 aa24■■□□□ 1.43
RPS3A-212ENST00000514682 ROBO2Q9HCK4 1378 aa23.96■■□□□ 1.43
RPS3A-212ENST00000514682 DCAF11Q8TEB1 546 aa23.95■■□□□ 1.42
RPS3A-212ENST00000514682 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.95■■□□□ 1.42
RPS3A-212ENST00000514682 DCCP43146 1447 aa23.94■■□□□ 1.42
RPS3A-212ENST00000514682 ADGRL3Q9HAR2 1447 aa23.94■■□□□ 1.42
RPS3A-212ENST00000514682 LRPPRCP42704 1394 aaKnown RBP23.94■■□□□ 1.42
RPS3A-212ENST00000514682 TECPR2O15040 1411 aa23.93■■□□□ 1.42
RPS3A-212ENST00000514682 KNDC1Q76NI1 1749 aa23.93■■□□□ 1.42
RPS3A-212ENST00000514682 NALCNQ8IZF0 1738 aa23.93■■□□□ 1.42
RPS3A-212ENST00000514682 C14orf93Q9H972 538 aaKnown RBP23.93■■□□□ 1.42
RPS3A-212ENST00000514682 STAC3Q96MF2 364 aa23.92■■□□□ 1.42
RPS3A-212ENST00000514682 C19orf44Q9H6X5 657 aa23.92■■□□□ 1.42
RPS3A-212ENST00000514682 KDM2AQ9Y2K7 1162 aa23.92■■□□□ 1.42
RPS3A-212ENST00000514682 YTHDC2Q9H6S0 1430 aaKnown RBP23.92■■□□□ 1.42
RPS3A-212ENST00000514682 CFAP70Q5T0N1 1121 aa23.91■■□□□ 1.42
RPS3A-212ENST00000514682 TMEM132EQ6IEE7 984 aa23.9■■□□□ 1.42
RPS3A-212ENST00000514682 FAM135BQ49AJ0 1406 aa23.9■■□□□ 1.42
RPS3A-212ENST00000514682 ROBO1Q9Y6N7 1651 aa23.89■■□□□ 1.42
RPS3A-212ENST00000514682 ATF3P18847 181 aa23.89■■□□□ 1.41
RPS3A-212ENST00000514682 HSPA1LP34931 641 aa23.89■■□□□ 1.41
RPS3A-212ENST00000514682 CADPS2Q86UW7 1296 aa23.89■■□□□ 1.41
RPS3A-212ENST00000514682 STK26Q9P289 416 aa23.89■■□□□ 1.41
RPS3A-212ENST00000514682 ABCC11Q96J66 1382 aa23.89■■□□□ 1.41
RPS3A-212ENST00000514682 ADGRB1O14514 1584 aa23.88■■□□□ 1.41
RPS3A-212ENST00000514682 SIN3AQ96ST3 1273 aa23.86■■□□□ 1.41
RPS3A-212ENST00000514682 SLAIN2Q9P270 581 aa23.86■■□□□ 1.41
RPS3A-212ENST00000514682 MST1RQ04912 1400 aa23.83■■□□□ 1.4
RPS3A-212ENST00000514682 CDC42BPGQ6DT37 1551 aa23.82■■□□□ 1.4
RPS3A-212ENST00000514682 NEUROD1Q13562 356 aa23.82■■□□□ 1.4
RPS3A-212ENST00000514682 DLC1Q96QB1 1528 aa23.81■■□□□ 1.4
RPS3A-212ENST00000514682 PCGF6Q9BYE7 350 aa23.81■■□□□ 1.4
RPS3A-212ENST00000514682 PLEKHH1Q9ULM0 1364 aa23.8■■□□□ 1.4
RPS3A-212ENST00000514682 KIAA1210Q9ULL0 1709 aa23.79■■□□□ 1.4
RPS3A-212ENST00000514682 WAPLQ7Z5K2 1190 aa23.78■■□□□ 1.4
RPS3A-212ENST00000514682 L3MBTL2Q969R5 705 aa23.78■■□□□ 1.4
RPS3A-212ENST00000514682 SIRT1Q96EB6 747 aa23.76■■□□□ 1.39
RPS3A-212ENST00000514682 AHDC1Q5TGY3 1603 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms