RNA–Protein interactions for RNA: ENST00000514663.5

PACRGL-232, Transcript of parkin coregulated like, humanhuman

TSL 4

Gene PACRGL, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-232ENST00000514663 SLC26A8Q96RN1 970 aa34.14■■■■□ 3.06
PACRGL-232ENST00000514663 NUP155O75694 1391 aa34.13■■■■□ 3.05
PACRGL-232ENST00000514663 RIMS2Q9UQ26 1411 aa34.11■■■■□ 3.05
PACRGL-232ENST00000514663 NWD1Q149M9 1564 aa34.11■■■■□ 3.05
PACRGL-232ENST00000514663 KCNA6P17658 529 aa34.09■■■■□ 3.05
PACRGL-232ENST00000514663 PLEKHG1Q9ULL1 1385 aa34.07■■■■□ 3.04
PACRGL-232ENST00000514663 TMEM94Q12767 1356 aa34.05■■■■□ 3.04
PACRGL-232ENST00000514663 MED1Q15648 1581 aaPredicted RBP34.04■■■■□ 3.04
PACRGL-232ENST00000514663 CHD2O14647 1828 aaKnown RBP34.04■■■■□ 3.04
PACRGL-232ENST00000514663 NKTRP30414 1462 aaKnown RBP34.02■■■■□ 3.04
PACRGL-232ENST00000514663 SENP3Q9H4L4 574 aaPredicted RBP34.02■■■■□ 3.04
PACRGL-232ENST00000514663 SPHKAPQ2M3C7 1700 aa34.01■■■■□ 3.04
PACRGL-232ENST00000514663 CHGAP10645 457 aaKnown RBP33.99■■■■□ 3.03
PACRGL-232ENST00000514663 NAIPQ13075 1403 aa33.97■■■■□ 3.03
PACRGL-232ENST00000514663 BCANQ96GW7 911 aa33.97■■■■□ 3.03
PACRGL-232ENST00000514663 PPP1R15AO75807 674 aaPredicted RBP33.96■■■■□ 3.03
PACRGL-232ENST00000514663 HDGFP51858 240 aaKnown RBP33.96■■■■□ 3.03
PACRGL-232ENST00000514663 PROSER2Q86WR7 435 aaPredicted RBP33.96■■■■□ 3.03
PACRGL-232ENST00000514663 RBM33Q96EV2 1170 aaKnown RBP33.96■■■■□ 3.03
PACRGL-232ENST00000514663 ADAMTS13Q76LX8 1427 aa33.95■■■■□ 3.02
PACRGL-232ENST00000514663 NUTM2DQ5VT03 806 aaPredicted RBP33.93■■■■□ 3.02
PACRGL-232ENST00000514663 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.93■■■■□ 3.02
PACRGL-232ENST00000514663 SOCS7O14512 581 aa33.91■■■■□ 3.02
PACRGL-232ENST00000514663 TBX22Q9Y458 520 aa33.91■■■■□ 3.02
PACRGL-232ENST00000514663 DIP2AQ14689 1571 aa33.9■■■■□ 3.02
PACRGL-232ENST00000514663 FAM135BQ49AJ0 1406 aa33.89■■■■□ 3.02
PACRGL-232ENST00000514663 ROBO1Q9Y6N7 1651 aa33.86■■■■□ 3.01
PACRGL-232ENST00000514663 CLTCL1P53675 1640 aa33.86■■■■□ 3.01
PACRGL-232ENST00000514663 NRXN3Q9Y4C0 1643 aa33.84■■■■□ 3.01
PACRGL-232ENST00000514663 HFM1A2PYH4 1435 aa33.84■■■■□ 3.01
PACRGL-232ENST00000514663 TRPM2O94759 1503 aa33.83■■■■□ 3.01
PACRGL-232ENST00000514663 MSH6P52701 1360 aa33.8■■■■□ 3
PACRGL-232ENST00000514663 PIK3R4Q99570 1358 aa33.8■■■■□ 3
PACRGL-232ENST00000514663 SETBP1Q9Y6X0 1596 aa33.77■■■■□ 3
PACRGL-232ENST00000514663 PTPRUQ92729 1446 aa33.77■■■■□ 3
PACRGL-232ENST00000514663 KIF1BO60333 1816 aa33.75■■■□□ 2.99
PACRGL-232ENST00000514663 NCOA3Q9Y6Q9 1424 aa33.75■■■□□ 2.99
PACRGL-232ENST00000514663 NEXMIFQ5QGS0 1516 aa33.74■■■□□ 2.99
PACRGL-232ENST00000514663 XRN1Q8IZH2 1706 aaKnown RBP33.71■■■□□ 2.99
PACRGL-232ENST00000514663 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.71■■■□□ 2.99
PACRGL-232ENST00000514663 SLAIN2Q9P270 581 aa33.7■■■□□ 2.99
PACRGL-232ENST00000514663 ZNF326Q5BKZ1 582 aaKnown RBP33.69■■■□□ 2.98
PACRGL-232ENST00000514663 TRIM52Q96A61 297 aa33.67■■■□□ 2.98
PACRGL-232ENST00000514663 AMOTL2Q9Y2J4 779 aa33.67■■■□□ 2.98
PACRGL-232ENST00000514663 PHF23Q9BUL5 403 aaPredicted RBP33.65■■■□□ 2.98
PACRGL-232ENST00000514663 PHLPP1O60346 1717 aa33.65■■■□□ 2.98
PACRGL-232ENST00000514663 METP08581 1390 aa33.62■■■□□ 2.97
PACRGL-232ENST00000514663 SLC4A1APQ9BWU0 796 aaKnown RBP33.6■■■□□ 2.97
PACRGL-232ENST00000514663 C14orf37Q86TY3 774 aa33.59■■■□□ 2.97
PACRGL-232ENST00000514663 C19orf44Q9H6X5 657 aa33.59■■■□□ 2.97
PACRGL-232ENST00000514663 COL16A1Q07092 1604 aaPredicted RBP33.57■■■□□ 2.97
PACRGL-232ENST00000514663 SETD1AO15047 1707 aaKnown RBP33.57■■■□□ 2.96
PACRGL-232ENST00000514663 RGS17Q9UGC6 210 aaPredicted RBP33.56■■■□□ 2.96
PACRGL-232ENST00000514663 CADPS2Q86UW7 1296 aa33.55■■■□□ 2.96
PACRGL-232ENST00000514663 PPLO60437 1756 aa33.54■■■□□ 2.96
PACRGL-232ENST00000514663 ATF3P18847 181 aa33.51■■■□□ 2.95
PACRGL-232ENST00000514663 DCCP43146 1447 aa33.51■■■□□ 2.95
PACRGL-232ENST00000514663 AHDC1Q5TGY3 1603 aaPredicted RBP33.5■■■□□ 2.95
PACRGL-232ENST00000514663 FOXD1Q16676 465 aa33.5■■■□□ 2.95
PACRGL-232ENST00000514663 NALCNQ8IZF0 1738 aa33.47■■■□□ 2.95
PACRGL-232ENST00000514663 JCADQ9P266 1359 aa33.47■■■□□ 2.95
PACRGL-232ENST00000514663 RPGRIP1LQ68CZ1 1315 aa33.45■■■□□ 2.95
PACRGL-232ENST00000514663 VGFO15240 615 aaPredicted RBP33.44■■■□□ 2.94
PACRGL-232ENST00000514663 MST1RQ04912 1400 aa33.43■■■□□ 2.94
PACRGL-232ENST00000514663 ADGRL3Q9HAR2 1447 aa33.43■■■□□ 2.94
PACRGL-232ENST00000514663 BRINP3Q76B58 766 aa33.42■■■□□ 2.94
PACRGL-232ENST00000514663 MPHOSPH9Q99550 1183 aa33.4■■■□□ 2.94
PACRGL-232ENST00000514663 ASXL1Q8IXJ9 1541 aa33.39■■■□□ 2.94
PACRGL-232ENST00000514663 PTCH1Q13635 1447 aa33.38■■■□□ 2.93
PACRGL-232ENST00000514663 PRAG1Q86YV5 1406 aa33.38■■■□□ 2.93
PACRGL-232ENST00000514663 IFT172Q9UG01 1749 aa33.38■■■□□ 2.93
PACRGL-232ENST00000514663 SHPRHQ149N8 1683 aa33.38■■■□□ 2.93
PACRGL-232ENST00000514663 SPATA31E1Q6ZUB1 1445 aa33.37■■■□□ 2.93
PACRGL-232ENST00000514663 CCDC144AA2RUR9 1427 aa33.36■■■□□ 2.93
PACRGL-232ENST00000514663 NHSL1Q5SYE7 1610 aa33.36■■■□□ 2.93
PACRGL-232ENST00000514663 ROBO2Q9HCK4 1378 aa33.35■■■□□ 2.93
PACRGL-232ENST00000514663 LRP6O75581 1613 aa33.35■■■□□ 2.93
PACRGL-232ENST00000514663 POTEAQ6S8J7 498 aa33.34■■■□□ 2.93
PACRGL-232ENST00000514663 SETD5Q9C0A6 1442 aa33.3■■■□□ 2.92
PACRGL-232ENST00000514663 ADGRF5Q8IZF2 1346 aa33.29■■■□□ 2.92
PACRGL-232ENST00000514663 SPATA31A6Q5VVP1 1343 aa33.28■■■□□ 2.92
PACRGL-232ENST00000514663 RGL3Q3MIN7 710 aa33.25■■■□□ 2.91
PACRGL-232ENST00000514663 C1orf167Q5SNV9 1468 aa33.24■■■□□ 2.91
PACRGL-232ENST00000514663 ANKRD30BQ9BXX2 1392 aa33.22■■■□□ 2.91
PACRGL-232ENST00000514663 LAMC1P11047 1609 aa33.2■■■□□ 2.91
PACRGL-232ENST00000514663 DDX17Q92841 729 aaKnown RBP33.2■■■□□ 2.91
PACRGL-232ENST00000514663 ACIN1Q9UKV3 1341 aaKnown RBP33.19■■■□□ 2.9
PACRGL-232ENST00000514663 RAB3GAP2Q9H2M9 1393 aa33.19■■■□□ 2.9
PACRGL-232ENST00000514663 PIK3C2GO75747 1445 aa33.18■■■□□ 2.9
PACRGL-232ENST00000514663 KNDC1Q76NI1 1749 aa33.16■■■□□ 2.9
PACRGL-232ENST00000514663 TECPR2O15040 1411 aa33.15■■■□□ 2.9
PACRGL-232ENST00000514663 CDC42BPGQ6DT37 1551 aa33.13■■■□□ 2.89
PACRGL-232ENST00000514663 LRPPRCP42704 1394 aaKnown RBP33.12■■■□□ 2.89
PACRGL-232ENST00000514663 MEX3CQ5U5Q3 659 aaKnown RBP33.11■■■□□ 2.89
PACRGL-232ENST00000514663 LRRC59Q96AG4 307 aaKnown RBP33.11■■■□□ 2.89
PACRGL-232ENST00000514663 ORAI2Q96SN7 254 aa33.11■■■□□ 2.89
PACRGL-232ENST00000514663 PNPLA6Q8IY17 1366 aa33.1■■■□□ 2.89
PACRGL-232ENST00000514663 NRXN1Q9ULB1 1477 aa33.1■■■□□ 2.89
PACRGL-232ENST00000514663 NUTM2BA6NNL0 878 aaPredicted RBP33.08■■■□□ 2.89
PACRGL-232ENST00000514663 NUTM2EB1AL46 878 aaPredicted RBP33.08■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms