RNA–Protein interactions for RNA: ENST00000514603.1

GYPA-210, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 5

Gene GYPA, Length 613 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-210ENST00000514603 TMEM134Q9H6X4 195 aa9.89□□□□□ -0.83
GYPA-210ENST00000514603 GPCPD1Q9NPB8 672 aa9.89□□□□□ -0.83
GYPA-210ENST00000514603 GIGYF2Q6Y7W6 1299 aaKnown RBP9.88□□□□□ -0.83
GYPA-210ENST00000514603 TMUB1Q9BVT8 246 aa9.88□□□□□ -0.83
GYPA-210ENST00000514603 KDM4CQ9H3R0 1056 aa9.88□□□□□ -0.83
GYPA-210ENST00000514603 ZFRQ96KR1 1074 aaKnown RBP9.87□□□□□ -0.83
GYPA-210ENST00000514603 SWT1Q5T5J6 900 aaKnown RBP9.86□□□□□ -0.83
GYPA-210ENST00000514603 SAMD7Q7Z3H4 446 aa9.86□□□□□ -0.83
GYPA-210ENST00000514603 DAXXQ9UER7 740 aaPredicted RBP9.86□□□□□ -0.83
GYPA-210ENST00000514603 MYT1LQ9UL68 1186 aa9.85□□□□□ -0.83
GYPA-210ENST00000514603 GOLGA8CPA6NN73 597 aa9.84□□□□□ -0.83
GYPA-210ENST00000514603 FAM217BQ9NTX9 383 aaPredicted RBP9.84□□□□□ -0.83
GYPA-210ENST00000514603 MS4A1P11836 297 aa9.83□□□□□ -0.84
GYPA-210ENST00000514603 DDX11L8A8MPP1 907 aa9.82□□□□□ -0.84
GYPA-210ENST00000514603 SSTR3P32745 418 aaPredicted RBP9.82□□□□□ -0.84
GYPA-210ENST00000514603 HDGFP51858 240 aaKnown RBP9.82□□□□□ -0.84
GYPA-210ENST00000514603 RNF40O75150 1001 aa9.81□□□□□ -0.84
GYPA-210ENST00000514603 ANKK1Q8NFD2 765 aa9.81□□□□□ -0.84
GYPA-210ENST00000514603 WNT2BQ93097 391 aa9.8□□□□□ -0.84
GYPA-210ENST00000514603 LRCH3Q96II8 777 aa9.8□□□□□ -0.84
GYPA-210ENST00000514603 FAM117AQ9C073 453 aa9.8□□□□□ -0.84
GYPA-210ENST00000514603 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.8□□□□□ -0.84
GYPA-210ENST00000514603 BCAMP50895 628 aa9.79□□□□□ -0.84
GYPA-210ENST00000514603 SULF1Q8IWU6 871 aa9.79□□□□□ -0.84
GYPA-210ENST00000514603 SLF2Q8IX21 1173 aa9.78□□□□□ -0.84
GYPA-210ENST00000514603 RDH13Q8NBN7 331 aa9.78□□□□□ -0.84
GYPA-210ENST00000514603 SLC10A3P09131 477 aa9.77□□□□□ -0.85
GYPA-210ENST00000514603 CD46P15529 392 aa9.77□□□□□ -0.85
GYPA-210ENST00000514603 SLC4A3P48751 1232 aa9.77□□□□□ -0.85
GYPA-210ENST00000514603 KCTD12Q96CX2 325 aaKnown RBP9.77□□□□□ -0.85
GYPA-210ENST00000514603 SOWAHBA6NEL2 793 aa9.76□□□□□ -0.85
GYPA-210ENST00000514603 IL27Q8NEV9 243 aa9.76□□□□□ -0.85
GYPA-210ENST00000514603 BEGAINQ9BUH8 593 aa9.76□□□□□ -0.85
GYPA-210ENST00000514603 DDRGK1Q96HY6 314 aa9.75□□□□□ -0.85
GYPA-210ENST00000514603 PLEKHG3A1L390 1219 aa9.74□□□□□ -0.85
GYPA-210ENST00000514603 HPS5Q9UPZ3 1129 aa9.74□□□□□ -0.85
GYPA-210ENST00000514603 RSPH4AQ5TD94 716 aa9.73□□□□□ -0.85
GYPA-210ENST00000514603 THSD4Q6ZMP0 1018 aa9.73□□□□□ -0.85
GYPA-210ENST00000514603 CFHP08603 1231 aa9.72□□□□□ -0.85
GYPA-210ENST00000514603 TSR3Q9UJK0 312 aaKnown RBP9.71□□□□□ -0.86
GYPA-210ENST00000514603 GCGRP47871 477 aa9.7□□□□□ -0.86
GYPA-210ENST00000514603 PPP4CP60510 307 aa9.7□□□□□ -0.86
GYPA-210ENST00000514603 NECTIN2Q92692 538 aa9.69□□□□□ -0.86
GYPA-210ENST00000514603 WBP1LQ9NX94 342 aa9.69□□□□□ -0.86
GYPA-210ENST00000514603 NUTM1Q86Y26 1132 aa9.68□□□□□ -0.86
GYPA-210ENST00000514603 SPIRE2Q8WWL2 714 aa9.68□□□□□ -0.86
GYPA-210ENST00000514603 TBC1D2Q9BYX2 928 aa9.68□□□□□ -0.86
GYPA-210ENST00000514603 KDM4AO75164 1064 aa9.67□□□□□ -0.86
GYPA-210ENST00000514603 PTPN5P54829 565 aa9.67□□□□□ -0.86
GYPA-210ENST00000514603 TMEM132AQ24JP5 1023 aa9.67□□□□□ -0.86
GYPA-210ENST00000514603 KMT5BQ4FZB7 885 aa9.67□□□□□ -0.86
GYPA-210ENST00000514603 APLP1P51693 650 aa9.66□□□□□ -0.86
GYPA-210ENST00000514603 FUT2Q10981 343 aa9.65□□□□□ -0.86
GYPA-210ENST00000514603 MYSM1Q5VVJ2 828 aa9.64□□□□□ -0.87
GYPA-210ENST00000514603 ACTN4O43707 911 aaKnown RBP9.63□□□□□ -0.87
GYPA-210ENST00000514603 DIXDC1Q155Q3 683 aa9.63□□□□□ -0.87
GYPA-210ENST00000514603 SH3D19Q5HYK7 790 aa9.63□□□□□ -0.87
GYPA-210ENST00000514603 PRR14Q9BWN1 585 aa9.63□□□□□ -0.87
GYPA-210ENST00000514603 RSPH6AQ9H0K4 717 aa9.63□□□□□ -0.87
GYPA-210ENST00000514603 MOXD2PA6NHM9 499 aa9.62□□□□□ -0.87
GYPA-210ENST00000514603 HOXA2O43364 376 aa9.62□□□□□ -0.87
GYPA-210ENST00000514603 USP46P62068 366 aa9.62□□□□□ -0.87
GYPA-210ENST00000514603 HLA-CQ95604 372 aa9.62□□□□□ -0.87
GYPA-210ENST00000514603 POLR3EQ9NVU0 708 aa9.62□□□□□ -0.87
GYPA-210ENST00000514603 PLA2G2EQ9NZK7 142 aa9.62□□□□□ -0.87
GYPA-210ENST00000514603 NDUFV2P19404 249 aa9.61□□□□□ -0.87
GYPA-210ENST00000514603 PUS10Q3MIT2 529 aaKnown RBP9.61□□□□□ -0.87
GYPA-210ENST00000514603 ATP6V1AP38606 617 aa9.6□□□□□ -0.87
GYPA-210ENST00000514603 GUCA2AQ02747 115 aa9.6□□□□□ -0.87
GYPA-210ENST00000514603 CLK2P49760 499 aaKnown RBP9.59□□□□□ -0.87
GYPA-210ENST00000514603 SKIV2LQ15477 1246 aaKnown RBP9.59□□□□□ -0.87
GYPA-210ENST00000514603 RSBN1LQ6PCB5 846 aaPredicted RBP9.59□□□□□ -0.87
GYPA-210ENST00000514603 NYAP1Q6ZVC0 841 aa9.59□□□□□ -0.87
GYPA-210ENST00000514603 RIC3Q7Z5B4 369 aa9.59□□□□□ -0.87
GYPA-210ENST00000514603 LIMD1Q9UGP4 676 aa9.59□□□□□ -0.87
GYPA-210ENST00000514603 PCDHB3Q9Y5E6 796 aa9.59□□□□□ -0.87
GYPA-210ENST00000514603 GRIPAP1Q4V328 841 aa9.58□□□□□ -0.88
GYPA-210ENST00000514603 GOPCQ9HD26 462 aa9.58□□□□□ -0.88
GYPA-210ENST00000514603 SPTLC1O15269 473 aa9.57□□□□□ -0.88
GYPA-210ENST00000514603 MORN1Q5T089 497 aa9.57□□□□□ -0.88
GYPA-210ENST00000514603 BLOC1S3Q6QNY0 202 aa9.57□□□□□ -0.88
GYPA-210ENST00000514603 PROCA1Q8NCQ7 364 aaPredicted RBP9.57□□□□□ -0.88
GYPA-210ENST00000514603 PCMTD1Q96MG8 357 aaPredicted RBP9.57□□□□□ -0.88
GYPA-210ENST00000514603 HCSTQ9UBK5 93 aa9.57□□□□□ -0.88
GYPA-210ENST00000514603 ATP1B4Q9UN42 357 aaPredicted RBP9.57□□□□□ -0.88
GYPA-210ENST00000514603 FDX1P10109 184 aa9.56□□□□□ -0.88
GYPA-210ENST00000514603 COPS2P61201 443 aa9.56□□□□□ -0.88
GYPA-210ENST00000514603 CSPP1Q1MSJ5 1256 aa9.56□□□□□ -0.88
GYPA-210ENST00000514603 PCDHGC3Q9UN70 934 aa9.55□□□□□ -0.88
GYPA-210ENST00000514603 SLC27A5Q9Y2P5 690 aa9.55□□□□□ -0.88
GYPA-210ENST00000514603 PCDHB15Q9Y5E8 787 aa9.55□□□□□ -0.88
GYPA-210ENST00000514603 GJA5P36382 358 aa9.54□□□□□ -0.88
GYPA-210ENST00000514603 MTRQ99707 1265 aa9.53□□□□□ -0.88
GYPA-210ENST00000514603 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.53□□□□□ -0.88
GYPA-210ENST00000514603 QPCTQ16769 361 aa9.52□□□□□ -0.89
GYPA-210ENST00000514603 NR1I2O75469 434 aa9.51□□□□□ -0.89
GYPA-210ENST00000514603 TUSC1Q2TAM9 212 aa9.51□□□□□ -0.89
GYPA-210ENST00000514603 SCUBE3Q8IX30 993 aa9.51□□□□□ -0.89
GYPA-210ENST00000514603 CABLES1Q8TDN4 633 aa9.51□□□□□ -0.89
GYPA-210ENST00000514603 TJAP1Q5JTD0 557 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms