RNA–Protein interactions for RNA: ENST00000513793.5

LINC02428-203, Transcript of long intergenic non-protein coding RNA 2428, humanhuman

TSL 5 BASIC

Gene LINC02428, Length 438 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02428-203ENST00000513793 RIMS2Q9UQ26 1411 aa12.25□□□□□ -0.45
LINC02428-203ENST00000513793 XIRP1Q702N8 1843 aaKnown RBP12.25□□□□□ -0.45
LINC02428-203ENST00000513793 ZFYVE9O95405 1425 aa12.24□□□□□ -0.45
LINC02428-203ENST00000513793 SLC4A1APQ9BWU0 796 aaKnown RBP12.24□□□□□ -0.45
LINC02428-203ENST00000513793 KIF1BO60333 1816 aa12.23□□□□□ -0.45
LINC02428-203ENST00000513793 BCANQ96GW7 911 aa12.23□□□□□ -0.45
LINC02428-203ENST00000513793 RBM33Q96EV2 1170 aaKnown RBP12.22□□□□□ -0.45
LINC02428-203ENST00000513793 TRPM2O94759 1503 aa12.21□□□□□ -0.45
LINC02428-203ENST00000513793 SETD5Q9C0A6 1442 aa12.21□□□□□ -0.45
LINC02428-203ENST00000513793 RAB3GAP2Q9H2M9 1393 aa12.2□□□□□ -0.46
LINC02428-203ENST00000513793 UBAP1LF5GYI3 381 aa12.2□□□□□ -0.46
LINC02428-203ENST00000513793 PPP1R15AO75807 674 aaPredicted RBP12.2□□□□□ -0.46
LINC02428-203ENST00000513793 PIAS4Q8N2W9 510 aaPredicted RBP12.2□□□□□ -0.46
LINC02428-203ENST00000513793 MPHOSPH9Q99550 1183 aa12.2□□□□□ -0.46
LINC02428-203ENST00000513793 CPS1P31327 1500 aa12.2□□□□□ -0.46
LINC02428-203ENST00000513793 LRRC7Q96NW7 1537 aa12.2□□□□□ -0.46
LINC02428-203ENST00000513793 ZNF326Q5BKZ1 582 aaKnown RBP12.19□□□□□ -0.46
LINC02428-203ENST00000513793 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
LINC02428-203ENST00000513793 CHD2O14647 1828 aaKnown RBP12.18□□□□□ -0.46
LINC02428-203ENST00000513793 NRXN3Q9Y4C0 1643 aa12.18□□□□□ -0.46
LINC02428-203ENST00000513793 NEXMIFQ5QGS0 1516 aa12.17□□□□□ -0.46
LINC02428-203ENST00000513793 IQSEC2Q5JU85 1478 aa12.17□□□□□ -0.46
LINC02428-203ENST00000513793 PLEKHG1Q9ULL1 1385 aa12.17□□□□□ -0.46
LINC02428-203ENST00000513793 PIP4K2BP78356 416 aa12.16□□□□□ -0.46
LINC02428-203ENST00000513793 ADAMTS13Q76LX8 1427 aa12.16□□□□□ -0.46
LINC02428-203ENST00000513793 SCAF1Q9H7N4 1312 aaKnown RBP12.15□□□□□ -0.46
LINC02428-203ENST00000513793 PPLO60437 1756 aa12.15□□□□□ -0.46
LINC02428-203ENST00000513793 NWD1Q149M9 1564 aa12.13□□□□□ -0.47
LINC02428-203ENST00000513793 KCNA6P17658 529 aa12.13□□□□□ -0.47
LINC02428-203ENST00000513793 RGL3Q3MIN7 710 aa12.13□□□□□ -0.47
LINC02428-203ENST00000513793 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC02428-203ENST00000513793 PTPRUQ92729 1446 aa12.12□□□□□ -0.47
LINC02428-203ENST00000513793 PROSER2Q86WR7 435 aaPredicted RBP12.12□□□□□ -0.47
LINC02428-203ENST00000513793 TMEM94Q12767 1356 aa12.12□□□□□ -0.47
LINC02428-203ENST00000513793 HDGFP51858 240 aaKnown RBP12.11□□□□□ -0.47
LINC02428-203ENST00000513793 SETD1AO15047 1707 aaKnown RBP12.11□□□□□ -0.47
LINC02428-203ENST00000513793 IFT172Q9UG01 1749 aa12.11□□□□□ -0.47
LINC02428-203ENST00000513793 TBX22Q9Y458 520 aa12.1□□□□□ -0.47
LINC02428-203ENST00000513793 CCDC144AA2RUR9 1427 aa12.1□□□□□ -0.47
LINC02428-203ENST00000513793 SETBP1Q9Y6X0 1596 aa12.09□□□□□ -0.47
LINC02428-203ENST00000513793 METP08581 1390 aa12.09□□□□□ -0.47
LINC02428-203ENST00000513793 DIP2AQ14689 1571 aa12.09□□□□□ -0.47
LINC02428-203ENST00000513793 TOM1O60784 492 aa12.08□□□□□ -0.48
LINC02428-203ENST00000513793 SPATA31E1Q6ZUB1 1445 aa12.08□□□□□ -0.48
LINC02428-203ENST00000513793 ADGRF5Q8IZF2 1346 aa12.08□□□□□ -0.48
LINC02428-203ENST00000513793 HSPA1LP34931 641 aa12.07□□□□□ -0.48
LINC02428-203ENST00000513793 XRN1Q8IZH2 1706 aaKnown RBP12.07□□□□□ -0.48
LINC02428-203ENST00000513793 AMOTL2Q9Y2J4 779 aa12.07□□□□□ -0.48
LINC02428-203ENST00000513793 NKTRP30414 1462 aaKnown RBP12.07□□□□□ -0.48
LINC02428-203ENST00000513793 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.06□□□□□ -0.48
LINC02428-203ENST00000513793 ANKRD30BQ9BXX2 1392 aa12.05□□□□□ -0.48
LINC02428-203ENST00000513793 ROBO1Q9Y6N7 1651 aa12.03□□□□□ -0.48
LINC02428-203ENST00000513793 VGFO15240 615 aaPredicted RBP12.03□□□□□ -0.48
LINC02428-203ENST00000513793 C14orf37Q86TY3 774 aa12.03□□□□□ -0.48
LINC02428-203ENST00000513793 NALCNQ8IZF0 1738 aa12.03□□□□□ -0.48
LINC02428-203ENST00000513793 RPGRIP1LQ68CZ1 1315 aa12.02□□□□□ -0.49
LINC02428-203ENST00000513793 PIK3R4Q99570 1358 aa12.02□□□□□ -0.49
LINC02428-203ENST00000513793 ASXL1Q8IXJ9 1541 aa12.01□□□□□ -0.49
LINC02428-203ENST00000513793 TMEM132EQ6IEE7 984 aa12.01□□□□□ -0.49
LINC02428-203ENST00000513793 MSH6P52701 1360 aa12.01□□□□□ -0.49
LINC02428-203ENST00000513793 HRCP23327 699 aa12□□□□□ -0.49
LINC02428-203ENST00000513793 STK26Q9P289 416 aa12□□□□□ -0.49
LINC02428-203ENST00000513793 KDM2AQ9Y2K7 1162 aa12□□□□□ -0.49
LINC02428-203ENST00000513793 ROBO2Q9HCK4 1378 aa11.99□□□□□ -0.49
LINC02428-203ENST00000513793 SLAIN2Q9P270 581 aa11.98□□□□□ -0.49
LINC02428-203ENST00000513793 PIK3C2GO75747 1445 aa11.97□□□□□ -0.49
LINC02428-203ENST00000513793 CFAP70Q5T0N1 1121 aa11.97□□□□□ -0.49
LINC02428-203ENST00000513793 ACIN1Q9UKV3 1341 aaKnown RBP11.96□□□□□ -0.49
LINC02428-203ENST00000513793 WAPLQ7Z5K2 1190 aa11.96□□□□□ -0.49
LINC02428-203ENST00000513793 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
LINC02428-203ENST00000513793 PHLPP1O60346 1717 aa11.96□□□□□ -0.49
LINC02428-203ENST00000513793 DHX57Q6P158 1386 aaKnown RBP11.95□□□□□ -0.5
LINC02428-203ENST00000513793 DISP3Q9P2K9 1392 aa11.95□□□□□ -0.5
LINC02428-203ENST00000513793 PLEKHH1Q9ULM0 1364 aa11.95□□□□□ -0.5
LINC02428-203ENST00000513793 SIN3AQ96ST3 1273 aa11.95□□□□□ -0.5
LINC02428-203ENST00000513793 C19orf44Q9H6X5 657 aa11.95□□□□□ -0.5
LINC02428-203ENST00000513793 MYOM2P54296 1465 aa11.95□□□□□ -0.5
LINC02428-203ENST00000513793 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
LINC02428-203ENST00000513793 FAM135BQ49AJ0 1406 aa11.94□□□□□ -0.5
LINC02428-203ENST00000513793 ATF3P18847 181 aa11.94□□□□□ -0.5
LINC02428-203ENST00000513793 DDX17Q92841 729 aaKnown RBP11.94□□□□□ -0.5
LINC02428-203ENST00000513793 KNDC1Q76NI1 1749 aa11.94□□□□□ -0.5
LINC02428-203ENST00000513793 ADGRL3Q9HAR2 1447 aa11.94□□□□□ -0.5
LINC02428-203ENST00000513793 MED1Q15648 1581 aaPredicted RBP11.93□□□□□ -0.5
LINC02428-203ENST00000513793 TRIM26Q12899 539 aaPredicted RBP11.93□□□□□ -0.5
LINC02428-203ENST00000513793 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
LINC02428-203ENST00000513793 NCOA3Q9Y6Q9 1424 aa11.93□□□□□ -0.5
LINC02428-203ENST00000513793 MSH5O43196 834 aa11.92□□□□□ -0.5
LINC02428-203ENST00000513793 MST1RQ04912 1400 aa11.92□□□□□ -0.5
LINC02428-203ENST00000513793 PTCH1Q13635 1447 aa11.92□□□□□ -0.5
LINC02428-203ENST00000513793 YTHDC2Q9H6S0 1430 aaKnown RBP11.92□□□□□ -0.5
LINC02428-203ENST00000513793 RGPD8O14715 1765 aaPredicted RBP11.92□□□□□ -0.5
LINC02428-203ENST00000513793 LRPPRCP42704 1394 aaKnown RBP11.92□□□□□ -0.5
LINC02428-203ENST00000513793 LAMC1P11047 1609 aa11.91□□□□□ -0.5
LINC02428-203ENST00000513793 COL16A1Q07092 1604 aaPredicted RBP11.91□□□□□ -0.5
LINC02428-203ENST00000513793 NUTM2FA1L443 756 aa11.91□□□□□ -0.5
LINC02428-203ENST00000513793 NEUROD1Q13562 356 aa11.91□□□□□ -0.5
LINC02428-203ENST00000513793 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
LINC02428-203ENST00000513793 ILDR2Q71H61 639 aa11.91□□□□□ -0.5
LINC02428-203ENST00000513793 BRINP3Q76B58 766 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms