RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 C9orf84Q5VXU9 1444 aa8.28□□□□□ -1.08
HTT-211ENST00000513326 UHRF1BP1Q6BDS2 1440 aa8.28□□□□□ -1.08
HTT-211ENST00000513326 SCAPERQ9BY12 1400 aa8.28□□□□□ -1.08
HTT-211ENST00000513326 ATP10AO60312 1499 aa8.27□□□□□ -1.09
HTT-211ENST00000513326 MAGI2Q86UL8 1455 aa8.27□□□□□ -1.09
HTT-211ENST00000513326 C7P10643 843 aa8.27□□□□□ -1.09
HTT-211ENST00000513326 RANGAP1P46060 587 aaPredicted RBP8.27□□□□□ -1.09
HTT-211ENST00000513326 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.27□□□□□ -1.09
HTT-211ENST00000513326 CDK13Q14004 1512 aaKnown RBP8.27□□□□□ -1.09
HTT-211ENST00000513326 C3P01024 1663 aa8.27□□□□□ -1.09
HTT-211ENST00000513326 FOXK1P85037 733 aa8.26□□□□□ -1.09
HTT-211ENST00000513326 DSG2Q14126 1118 aa8.26□□□□□ -1.09
HTT-211ENST00000513326 TESPA1A2RU30 521 aaPredicted RBP8.25□□□□□ -1.09
HTT-211ENST00000513326 SEMA3EO15041 775 aa8.25□□□□□ -1.09
HTT-211ENST00000513326 LMOD2Q6P5Q4 547 aa8.25□□□□□ -1.09
HTT-211ENST00000513326 COLQQ9Y215 455 aaPredicted RBP8.25□□□□□ -1.09
HTT-211ENST00000513326 NCOA1Q15788 1441 aa8.25□□□□□ -1.09
HTT-211ENST00000513326 ZNF335Q9H4Z2 1342 aaPredicted RBP8.25□□□□□ -1.09
HTT-211ENST00000513326 MED1Q15648 1581 aaPredicted RBP8.24□□□□□ -1.09
HTT-211ENST00000513326 DIP2CQ9Y2E4 1556 aa8.24□□□□□ -1.09
HTT-211ENST00000513326 SP7Q8TDD2 431 aaPredicted RBP8.24□□□□□ -1.09
HTT-211ENST00000513326 PLCH2O75038 1416 aa8.23□□□□□ -1.09
HTT-211ENST00000513326 C2orf72A6NCS6 295 aa8.23□□□□□ -1.09
HTT-211ENST00000513326 PLEKHD1A6NEE1 506 aa8.23□□□□□ -1.09
HTT-211ENST00000513326 KIF3CO14782 793 aa8.23□□□□□ -1.09
HTT-211ENST00000513326 SMYD5Q6GMV2 418 aa8.23□□□□□ -1.09
HTT-211ENST00000513326 IQSEC2Q5JU85 1478 aa8.23□□□□□ -1.09
HTT-211ENST00000513326 ABCA6Q8N139 1617 aa8.22□□□□□ -1.09
HTT-211ENST00000513326 UBAP1LF5GYI3 381 aa8.22□□□□□ -1.09
HTT-211ENST00000513326 METRNQ9UJH8 293 aa8.22□□□□□ -1.09
HTT-211ENST00000513326 KIF14Q15058 1648 aa8.21□□□□□ -1.09
HTT-211ENST00000513326 CAMSAP1Q5T5Y3 1602 aa8.21□□□□□ -1.09
HTT-211ENST00000513326 SETD1BQ9UPS6 1966 aaKnown RBP8.21□□□□□ -1.09
HTT-211ENST00000513326 POTEIP0CG38 1075 aa8.21□□□□□ -1.1
HTT-211ENST00000513326 PLPP6Q8IY26 295 aa8.21□□□□□ -1.1
HTT-211ENST00000513326 AFAP1Q8N556 730 aa8.21□□□□□ -1.1
HTT-211ENST00000513326 KDM5CP41229 1560 aa8.21□□□□□ -1.1
HTT-211ENST00000513326 POTEFA5A3E0 1075 aa8.2□□□□□ -1.1
HTT-211ENST00000513326 HSPA1LP34931 641 aa8.2□□□□□ -1.1
HTT-211ENST00000513326 EMILIN3Q9NT22 766 aa8.2□□□□□ -1.1
HTT-211ENST00000513326 TRAPPC8Q9Y2L5 1435 aa8.19□□□□□ -1.1
HTT-211ENST00000513326 MYO5CQ9NQX4 1742 aa8.18□□□□□ -1.1
HTT-211ENST00000513326 SPDYE16A6NNV3 312 aaPredicted RBP8.18□□□□□ -1.1
HTT-211ENST00000513326 DPYSL4O14531 572 aa8.18□□□□□ -1.1
HTT-211ENST00000513326 ZNF518AQ6AHZ1 1483 aa8.18□□□□□ -1.1
HTT-211ENST00000513326 REREQ9P2R6 1566 aa8.18□□□□□ -1.1
HTT-211ENST00000513326 TMEM92Q6UXU6 159 aa8.17□□□□□ -1.1
HTT-211ENST00000513326 FAM9AQ8IZU1 332 aaPredicted RBP8.17□□□□□ -1.1
HTT-211ENST00000513326 PIP4K2BP78356 416 aa8.16□□□□□ -1.1
HTT-211ENST00000513326 ARHGAP5Q13017 1502 aa8.16□□□□□ -1.1
HTT-211ENST00000513326 PDIA6Q15084 440 aa8.16□□□□□ -1.1
HTT-211ENST00000513326 C3orf67Q6ZVT6 689 aa8.16□□□□□ -1.1
HTT-211ENST00000513326 ALKQ9UM73 1620 aa8.16□□□□□ -1.1
HTT-211ENST00000513326 AGLP35573 1532 aa8.15□□□□□ -1.1
HTT-211ENST00000513326 EFCAB2Q5VUJ9 269 aa8.15□□□□□ -1.1
HTT-211ENST00000513326 KIDINS220Q9ULH0 1771 aa8.15□□□□□ -1.11
HTT-211ENST00000513326 MYO3AQ8NEV4 1616 aa8.14□□□□□ -1.11
HTT-211ENST00000513326 TCOF1Q13428 1488 aaKnown RBP8.14□□□□□ -1.11
HTT-211ENST00000513326 MAP3K9P80192 1104 aa8.14□□□□□ -1.11
HTT-211ENST00000513326 MYT1LQ9UL68 1186 aa8.14□□□□□ -1.11
HTT-211ENST00000513326 ZNF142P52746 1687 aaPredicted RBP8.14□□□□□ -1.11
HTT-211ENST00000513326 ABCC1P33527 1531 aa8.13□□□□□ -1.11
HTT-211ENST00000513326 MLH3Q9UHC1 1453 aa8.13□□□□□ -1.11
HTT-211ENST00000513326 LRRIQ1Q96JM4 1722 aa8.13□□□□□ -1.11
HTT-211ENST00000513326 CDC42BPBQ9Y5S2 1711 aa8.13□□□□□ -1.11
HTT-211ENST00000513326 MLLT3P42568 568 aaPredicted RBP8.13□□□□□ -1.11
HTT-211ENST00000513326 ZC3H15Q8WU90 426 aaKnown RBP8.13□□□□□ -1.11
HTT-211ENST00000513326 NPATQ14207 1427 aa8.12□□□□□ -1.11
HTT-211ENST00000513326 ITSN2Q9NZM3 1697 aa8.12□□□□□ -1.11
HTT-211ENST00000513326 CEP170BQ9Y4F5 1589 aaPredicted RBP8.12□□□□□ -1.11
HTT-211ENST00000513326 MROH2AA6NES4 1674 aa8.11□□□□□ -1.11
HTT-211ENST00000513326 CLTCQ00610 1675 aaKnown RBP8.11□□□□□ -1.11
HTT-211ENST00000513326 ZMYM3Q14202 1370 aa8.11□□□□□ -1.11
HTT-211ENST00000513326 OXER1Q8TDS5 423 aa8.11□□□□□ -1.11
HTT-211ENST00000513326 ATP1B4Q9UN42 357 aaPredicted RBP8.11□□□□□ -1.11
HTT-211ENST00000513326 PLA2R1Q13018 1463 aa8.11□□□□□ -1.11
HTT-211ENST00000513326 TROQ12816 1431 aaPredicted RBP8.11□□□□□ -1.11
HTT-211ENST00000513326 PTPRKQ15262 1439 aa8.11□□□□□ -1.11
HTT-211ENST00000513326 CNTLNQ9NXG0 1405 aa8.11□□□□□ -1.11
HTT-211ENST00000513326 NEURL4Q96JN8 1562 aa8.1□□□□□ -1.11
HTT-211ENST00000513326 ESF1Q9H501 851 aaKnown RBP8.1□□□□□ -1.11
HTT-211ENST00000513326 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.1□□□□□ -1.11
HTT-211ENST00000513326 RGS17Q9UGC6 210 aaPredicted RBP8.1□□□□□ -1.11
HTT-211ENST00000513326 PREX2Q70Z35 1606 aa8.1□□□□□ -1.11
HTT-211ENST00000513326 SUPT6HQ7KZ85 1726 aaKnown RBP8.09□□□□□ -1.11
HTT-211ENST00000513326 UPF1Q92900 1129 aaKnown RBP eCLIP8.09□□□□□ -1.11
HTT-211ENST00000513326 SAMD9LQ8IVG5 1584 aa8.09□□□□□ -1.11
HTT-211ENST00000513326 TBC1D12O60347 775 aa8.08□□□□□ -1.12
HTT-211ENST00000513326 RBM26Q5T8P6 1007 aaKnown RBP8.08□□□□□ -1.12
HTT-211ENST00000513326 VWDEQ8N2E2 1590 aa8.08□□□□□ -1.12
HTT-211ENST00000513326 DNMT1P26358 1616 aaKnown RBP8.07□□□□□ -1.12
HTT-211ENST00000513326 ARHGAP35Q9NRY4 1499 aa8.07□□□□□ -1.12
HTT-211ENST00000513326 SLC34A2O95436 690 aa8.07□□□□□ -1.12
HTT-211ENST00000513326 PTCD2Q8WV60 388 aaKnown RBP8.07□□□□□ -1.12
HTT-211ENST00000513326 SHANK2Q9UPX8 1470 aa8.06□□□□□ -1.12
HTT-211ENST00000513326 PLXNC1O60486 1568 aa8.06□□□□□ -1.12
HTT-211ENST00000513326 ZMYND10O75800 440 aa8.06□□□□□ -1.12
HTT-211ENST00000513326 GPIHBP1Q8IV16 184 aa8.06□□□□□ -1.12
HTT-211ENST00000513326 SYCP2Q9BX26 1530 aa8.06□□□□□ -1.12
HTT-211ENST00000513326 CDC42BPAQ5VT25 1732 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms