RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 NKTRP30414 1462 aaKnown RBP38.76■■■■□ 3.8
CLDND1-226ENST00000513287 TMEM94Q12767 1356 aa38.76■■■■□ 3.8
CLDND1-226ENST00000513287 NWD1Q149M9 1564 aa38.76■■■■□ 3.8
CLDND1-226ENST00000513287 PLEKHG1Q9ULL1 1385 aa38.75■■■■□ 3.79
CLDND1-226ENST00000513287 IQGAP3Q86VI3 1631 aa38.74■■■■□ 3.79
CLDND1-226ENST00000513287 E9PCH4 1651 aa38.71■■■■□ 3.79
CLDND1-226ENST00000513287 MYO5BQ9ULV0 1848 aa38.71■■■■□ 3.79
CLDND1-226ENST00000513287 PROSER2Q86WR7 435 aaPredicted RBP38.7■■■■□ 3.79
CLDND1-226ENST00000513287 RIMS2Q9UQ26 1411 aa38.7■■■■□ 3.79
CLDND1-226ENST00000513287 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.68■■■■□ 3.78
CLDND1-226ENST00000513287 TBX22Q9Y458 520 aa38.65■■■■□ 3.78
CLDND1-226ENST00000513287 CHD2O14647 1828 aaKnown RBP38.65■■■■□ 3.78
CLDND1-226ENST00000513287 NUP155O75694 1391 aa38.62■■■■□ 3.77
CLDND1-226ENST00000513287 BCANQ96GW7 911 aa38.62■■■■□ 3.77
CLDND1-226ENST00000513287 PPP1R15AO75807 674 aaPredicted RBP38.6■■■■□ 3.77
CLDND1-226ENST00000513287 PHF23Q9BUL5 403 aaPredicted RBP38.59■■■■□ 3.77
CLDND1-226ENST00000513287 NCOA3Q9Y6Q9 1424 aa38.59■■■■□ 3.77
CLDND1-226ENST00000513287 MSH6P52701 1360 aa38.56■■■■□ 3.76
CLDND1-226ENST00000513287 PIK3R4Q99570 1358 aa38.56■■■■□ 3.76
CLDND1-226ENST00000513287 DIP2AQ14689 1571 aa38.54■■■■□ 3.76
CLDND1-226ENST00000513287 ROBO1Q9Y6N7 1651 aa38.52■■■■□ 3.76
CLDND1-226ENST00000513287 CHGAP10645 457 aaKnown RBP38.51■■■■□ 3.76
CLDND1-226ENST00000513287 ADAMTS13Q76LX8 1427 aa38.51■■■■□ 3.76
CLDND1-226ENST00000513287 SENP3Q9H4L4 574 aaPredicted RBP38.5■■■■□ 3.75
CLDND1-226ENST00000513287 ITGAEP38570 1179 aa38.49■■■■□ 3.75
CLDND1-226ENST00000513287 RBM33Q96EV2 1170 aaKnown RBP38.49■■■■□ 3.75
CLDND1-226ENST00000513287 SLAIN2Q9P270 581 aa38.47■■■■□ 3.75
CLDND1-226ENST00000513287 RRBP1Q9P2E9 1410 aaKnown RBP38.45■■■■□ 3.75
CLDND1-226ENST00000513287 SPHKAPQ2M3C7 1700 aa38.4■■■■□ 3.74
CLDND1-226ENST00000513287 PPARGC1BQ86YN6 1023 aaKnown RBP38.39■■■■□ 3.74
CLDND1-226ENST00000513287 TRPM2O94759 1503 aa38.38■■■■□ 3.73
CLDND1-226ENST00000513287 RGS17Q9UGC6 210 aaPredicted RBP38.37■■■■□ 3.73
CLDND1-226ENST00000513287 NUTM2DQ5VT03 806 aaPredicted RBP38.35■■■■□ 3.73
CLDND1-226ENST00000513287 C19orf44Q9H6X5 657 aa38.35■■■■□ 3.73
CLDND1-226ENST00000513287 CADPS2Q86UW7 1296 aa38.32■■■■□ 3.72
CLDND1-226ENST00000513287 SETBP1Q9Y6X0 1596 aa38.31■■■■□ 3.72
CLDND1-226ENST00000513287 NAIPQ13075 1403 aa38.29■■■■□ 3.72
CLDND1-226ENST00000513287 AMOTL2Q9Y2J4 779 aa38.28■■■■□ 3.72
CLDND1-226ENST00000513287 PHLPP1O60346 1717 aa38.28■■■■□ 3.72
CLDND1-226ENST00000513287 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.28■■■■□ 3.72
CLDND1-226ENST00000513287 JCADQ9P266 1359 aa38.26■■■■□ 3.72
CLDND1-226ENST00000513287 PTPRUQ92729 1446 aa38.26■■■■□ 3.72
CLDND1-226ENST00000513287 NRXN3Q9Y4C0 1643 aa38.26■■■■□ 3.71
CLDND1-226ENST00000513287 C14orf37Q86TY3 774 aa38.24■■■■□ 3.71
CLDND1-226ENST00000513287 DCCP43146 1447 aa38.22■■■■□ 3.71
CLDND1-226ENST00000513287 ATF3P18847 181 aa38.22■■■■□ 3.71
CLDND1-226ENST00000513287 XRN1Q8IZH2 1706 aaKnown RBP38.2■■■■□ 3.71
CLDND1-226ENST00000513287 COL16A1Q07092 1604 aaPredicted RBP38.2■■■■□ 3.7
CLDND1-226ENST00000513287 ZNF326Q5BKZ1 582 aaKnown RBP38.19■■■■□ 3.7
CLDND1-226ENST00000513287 CLTCL1P53675 1640 aa38.18■■■■□ 3.7
CLDND1-226ENST00000513287 HFM1A2PYH4 1435 aa38.17■■■■□ 3.7
CLDND1-226ENST00000513287 AHDC1Q5TGY3 1603 aaPredicted RBP38.16■■■■□ 3.7
CLDND1-226ENST00000513287 NEXMIFQ5QGS0 1516 aa38.16■■■■□ 3.7
CLDND1-226ENST00000513287 KIF1BO60333 1816 aa38.15■■■■□ 3.7
CLDND1-226ENST00000513287 SPATA31A6Q5VVP1 1343 aa38.12■■■■□ 3.69
CLDND1-226ENST00000513287 METP08581 1390 aa38.11■■■■□ 3.69
CLDND1-226ENST00000513287 POTEAQ6S8J7 498 aa38.1■■■■□ 3.69
CLDND1-226ENST00000513287 BRINP3Q76B58 766 aa38.05■■■■□ 3.68
CLDND1-226ENST00000513287 VGFO15240 615 aaPredicted RBP38.04■■■■□ 3.68
CLDND1-226ENST00000513287 RPGRIP1LQ68CZ1 1315 aa38.04■■■■□ 3.68
CLDND1-226ENST00000513287 SHPRHQ149N8 1683 aa38.03■■■■□ 3.68
CLDND1-226ENST00000513287 TRIM52Q96A61 297 aa38.01■■■■□ 3.68
CLDND1-226ENST00000513287 MST1RQ04912 1400 aa38■■■■□ 3.67
CLDND1-226ENST00000513287 ADGRL3Q9HAR2 1447 aa37.99■■■■□ 3.67
CLDND1-226ENST00000513287 SLC4A1APQ9BWU0 796 aaKnown RBP37.98■■■■□ 3.67
CLDND1-226ENST00000513287 ASXL1Q8IXJ9 1541 aa37.96■■■■□ 3.67
CLDND1-226ENST00000513287 PRAG1Q86YV5 1406 aa37.95■■■■□ 3.67
CLDND1-226ENST00000513287 SETD5Q9C0A6 1442 aa37.94■■■■□ 3.66
CLDND1-226ENST00000513287 LRP6O75581 1613 aa37.94■■■■□ 3.66
CLDND1-226ENST00000513287 PTCH1Q13635 1447 aa37.93■■■■□ 3.66
CLDND1-226ENST00000513287 SETD1AO15047 1707 aaKnown RBP37.92■■■■□ 3.66
CLDND1-226ENST00000513287 NHSL1Q5SYE7 1610 aa37.91■■■■□ 3.66
CLDND1-226ENST00000513287 ZNF772Q68DY9 489 aaPredicted RBP37.88■■■■□ 3.65
CLDND1-226ENST00000513287 NALCNQ8IZF0 1738 aa37.87■■■■□ 3.65
CLDND1-226ENST00000513287 PPLO60437 1756 aa37.87■■■■□ 3.65
CLDND1-226ENST00000513287 LRRC59Q96AG4 307 aaKnown RBP37.86■■■■□ 3.65
CLDND1-226ENST00000513287 MEX3CQ5U5Q3 659 aaKnown RBP37.83■■■■□ 3.65
CLDND1-226ENST00000513287 ACIN1Q9UKV3 1341 aaKnown RBP37.82■■■■□ 3.64
CLDND1-226ENST00000513287 LAMC1P11047 1609 aa37.79■■■■□ 3.64
CLDND1-226ENST00000513287 ROBO2Q9HCK4 1378 aa37.79■■■■□ 3.64
CLDND1-226ENST00000513287 C1orf167Q5SNV9 1468 aa37.78■■■■□ 3.64
CLDND1-226ENST00000513287 CCDC144AA2RUR9 1427 aa37.74■■■■□ 3.63
CLDND1-226ENST00000513287 MPHOSPH9Q99550 1183 aa37.72■■■■□ 3.63
CLDND1-226ENST00000513287 SPATA31E1Q6ZUB1 1445 aa37.71■■■■□ 3.63
CLDND1-226ENST00000513287 PNPLA6Q8IY17 1366 aa37.69■■■■□ 3.62
CLDND1-226ENST00000513287 ANKRD30BQ9BXX2 1392 aa37.69■■■■□ 3.62
CLDND1-226ENST00000513287 FOXD1Q16676 465 aa37.68■■■■□ 3.62
CLDND1-226ENST00000513287 NUTM2BA6NNL0 878 aaPredicted RBP37.67■■■■□ 3.62
CLDND1-226ENST00000513287 NUTM2EB1AL46 878 aaPredicted RBP37.67■■■■□ 3.62
CLDND1-226ENST00000513287 NUTM2AQ8IVF1 878 aaPredicted RBP37.67■■■■□ 3.62
CLDND1-226ENST00000513287 SOS2Q07890 1332 aaPredicted RBP37.66■■■■□ 3.62
CLDND1-226ENST00000513287 CDK12Q9NYV4 1490 aaPredicted RBP37.65■■■■□ 3.62
CLDND1-226ENST00000513287 DDX17Q92841 729 aaKnown RBP37.64■■■■□ 3.62
CLDND1-226ENST00000513287 IFT172Q9UG01 1749 aa37.64■■■■□ 3.62
CLDND1-226ENST00000513287 ADGRF5Q8IZF2 1346 aa37.63■■■■□ 3.62
CLDND1-226ENST00000513287 TECPR2O15040 1411 aa37.63■■■■□ 3.61
CLDND1-226ENST00000513287 RXRBP28702 533 aa37.63■■■■□ 3.61
CLDND1-226ENST00000513287 ORAI2Q96SN7 254 aa37.61■■■■□ 3.61
CLDND1-226ENST00000513287 AFF2P51816 1311 aa37.61■■■■□ 3.61
CLDND1-226ENST00000513287 CDC42BPGQ6DT37 1551 aa37.6■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms