RNA–Protein interactions for RNA: ENST00000512868.6

SERF1A-208, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 4

Gene SERF1A, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-208ENST00000512868 ZNF335Q9H4Z2 1342 aaPredicted RBP21.52■■□□□ 1.03
SERF1A-208ENST00000512868 ZNF326Q5BKZ1 582 aaKnown RBP21.51■■□□□ 1.03
SERF1A-208ENST00000512868 BCANQ96GW7 911 aa21.51■■□□□ 1.03
SERF1A-208ENST00000512868 ZFYVE9O95405 1425 aa21.51■■□□□ 1.03
SERF1A-208ENST00000512868 IQGAP1P46940 1657 aa21.5■■□□□ 1.03
SERF1A-208ENST00000512868 CCDC144AA2RUR9 1427 aa21.49■■□□□ 1.03
SERF1A-208ENST00000512868 TRIM26Q12899 539 aaPredicted RBP21.49■■□□□ 1.03
SERF1A-208ENST00000512868 LTBP4Q8N2S1 1624 aa21.48■■□□□ 1.03
SERF1A-208ENST00000512868 PLEKHG1Q9ULL1 1385 aa21.48■■□□□ 1.03
SERF1A-208ENST00000512868 CLTCL1P53675 1640 aa21.46■■□□□ 1.03
SERF1A-208ENST00000512868 RPGRIP1LQ68CZ1 1315 aa21.44■■□□□ 1.02
SERF1A-208ENST00000512868 CPS1P31327 1500 aa21.44■■□□□ 1.02
SERF1A-208ENST00000512868 SLC26A8Q96RN1 970 aa21.43■■□□□ 1.02
SERF1A-208ENST00000512868 IQSEC2Q5JU85 1478 aa21.42■■□□□ 1.02
SERF1A-208ENST00000512868 NUTM2DQ5VT03 806 aaPredicted RBP21.42■■□□□ 1.02
SERF1A-208ENST00000512868 VGFO15240 615 aaPredicted RBP21.41■■□□□ 1.02
SERF1A-208ENST00000512868 TBX22Q9Y458 520 aa21.41■■□□□ 1.02
SERF1A-208ENST00000512868 KCNA6P17658 529 aa21.37■■□□□ 1.01
SERF1A-208ENST00000512868 ANKRD30BQ9BXX2 1392 aa21.36■■□□□ 1.01
SERF1A-208ENST00000512868 KIF1BO60333 1816 aa21.35■■□□□ 1.01
SERF1A-208ENST00000512868 MYO5BQ9ULV0 1848 aa21.35■■□□□ 1.01
SERF1A-208ENST00000512868 RGL3Q3MIN7 710 aa21.35■■□□□ 1.01
SERF1A-208ENST00000512868 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
SERF1A-208ENST00000512868 NEXMIFQ5QGS0 1516 aa21.34■■□□□ 1.01
SERF1A-208ENST00000512868 SPATA31E1Q6ZUB1 1445 aa21.34■■□□□ 1.01
SERF1A-208ENST00000512868 PIK3R4Q99570 1358 aa21.34■■□□□ 1.01
SERF1A-208ENST00000512868 DIP2AQ14689 1571 aa21.33■■□□□ 1.01
SERF1A-208ENST00000512868 ADAMTS13Q76LX8 1427 aa21.32■■□□□ 1
SERF1A-208ENST00000512868 SETBP1Q9Y6X0 1596 aa21.3■■□□□ 1
SERF1A-208ENST00000512868 LRRC7Q96NW7 1537 aa21.29■■□□□ 1
SERF1A-208ENST00000512868 NKTRP30414 1462 aaKnown RBP21.27■■□□□ 1
SERF1A-208ENST00000512868 PROSER2Q86WR7 435 aaPredicted RBP21.27■■□□□ 1
SERF1A-208ENST00000512868 UBAP1LF5GYI3 381 aa21.26■□□□□ 0.99
SERF1A-208ENST00000512868 TOM1O60784 492 aa21.26■□□□□ 0.99
SERF1A-208ENST00000512868 NWD1Q149M9 1564 aa21.24■□□□□ 0.99
SERF1A-208ENST00000512868 STAC3Q96MF2 364 aa21.24■□□□□ 0.99
SERF1A-208ENST00000512868 AMOTL2Q9Y2J4 779 aa21.24■□□□□ 0.99
SERF1A-208ENST00000512868 TMEM94Q12767 1356 aa21.23■□□□□ 0.99
SERF1A-208ENST00000512868 ADGRF5Q8IZF2 1346 aa21.22■□□□□ 0.99
SERF1A-208ENST00000512868 METP08581 1390 aa21.21■□□□□ 0.99
SERF1A-208ENST00000512868 STRCP1A6NGW2 1772 aa21.2■□□□□ 0.99
SERF1A-208ENST00000512868 NRXN3Q9Y4C0 1643 aa21.2■□□□□ 0.98
SERF1A-208ENST00000512868 NCOA3Q9Y6Q9 1424 aa21.2■□□□□ 0.98
SERF1A-208ENST00000512868 PPLO60437 1756 aa21.19■□□□□ 0.98
SERF1A-208ENST00000512868 MYOM2P54296 1465 aa21.18■□□□□ 0.98
SERF1A-208ENST00000512868 DCAF11Q8TEB1 546 aa21.17■□□□□ 0.98
SERF1A-208ENST00000512868 PIK3C2GO75747 1445 aa21.17■□□□□ 0.98
SERF1A-208ENST00000512868 ALKQ9UM73 1620 aa21.16■□□□□ 0.98
SERF1A-208ENST00000512868 PTPRUQ92729 1446 aa21.16■□□□□ 0.98
SERF1A-208ENST00000512868 MSH6P52701 1360 aa21.16■□□□□ 0.98
SERF1A-208ENST00000512868 C14orf37Q86TY3 774 aa21.16■□□□□ 0.98
SERF1A-208ENST00000512868 DHX57Q6P158 1386 aaKnown RBP21.15■□□□□ 0.98
SERF1A-208ENST00000512868 CHD2O14647 1828 aaKnown RBP21.15■□□□□ 0.98
SERF1A-208ENST00000512868 RBM33Q96EV2 1170 aaKnown RBP21.14■□□□□ 0.97
SERF1A-208ENST00000512868 NRXN1Q9ULB1 1477 aa21.13■□□□□ 0.97
SERF1A-208ENST00000512868 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
SERF1A-208ENST00000512868 C14orf93Q9H972 538 aaKnown RBP21.13■□□□□ 0.97
SERF1A-208ENST00000512868 PIP4K2BP78356 416 aa21.12■□□□□ 0.97
SERF1A-208ENST00000512868 C19orf44Q9H6X5 657 aa21.12■□□□□ 0.97
SERF1A-208ENST00000512868 KDM2AQ9Y2K7 1162 aa21.12■□□□□ 0.97
SERF1A-208ENST00000512868 IFT172Q9UG01 1749 aa21.12■□□□□ 0.97
SERF1A-208ENST00000512868 PCGF6Q9BYE7 350 aa21.11■□□□□ 0.97
SERF1A-208ENST00000512868 PTCH1Q13635 1447 aa21.09■□□□□ 0.97
SERF1A-208ENST00000512868 PRAG1Q86YV5 1406 aa21.09■□□□□ 0.97
SERF1A-208ENST00000512868 XRN1Q8IZH2 1706 aaKnown RBP21.09■□□□□ 0.97
SERF1A-208ENST00000512868 ATF3P18847 181 aa21.08■□□□□ 0.97
SERF1A-208ENST00000512868 CFAP70Q5T0N1 1121 aa21.08■□□□□ 0.97
SERF1A-208ENST00000512868 CADPS2Q86UW7 1296 aa21.08■□□□□ 0.97
SERF1A-208ENST00000512868 LRPPRCP42704 1394 aaKnown RBP21.07■□□□□ 0.96
SERF1A-208ENST00000512868 TMEM132EQ6IEE7 984 aa21.06■□□□□ 0.96
SERF1A-208ENST00000512868 SIN3AQ96ST3 1273 aa21.06■□□□□ 0.96
SERF1A-208ENST00000512868 NEUROD1Q13562 356 aa21.05■□□□□ 0.96
SERF1A-208ENST00000512868 STK26Q9P289 416 aa21.05■□□□□ 0.96
SERF1A-208ENST00000512868 ABCC11Q96J66 1382 aa21.05■□□□□ 0.96
SERF1A-208ENST00000512868 SETD1AO15047 1707 aaKnown RBP21.04■□□□□ 0.96
SERF1A-208ENST00000512868 SLAIN2Q9P270 581 aa21.04■□□□□ 0.96
SERF1A-208ENST00000512868 ROBO2Q9HCK4 1378 aa21.04■□□□□ 0.96
SERF1A-208ENST00000512868 LAMC1P11047 1609 aa21.04■□□□□ 0.96
SERF1A-208ENST00000512868 TECPR2O15040 1411 aa21.04■□□□□ 0.96
SERF1A-208ENST00000512868 DCCP43146 1447 aa21.04■□□□□ 0.96
SERF1A-208ENST00000512868 YTHDC2Q9H6S0 1430 aaKnown RBP21.03■□□□□ 0.96
SERF1A-208ENST00000512868 SIRT1Q96EB6 747 aa21.02■□□□□ 0.96
SERF1A-208ENST00000512868 FAM135BQ49AJ0 1406 aa21.02■□□□□ 0.96
SERF1A-208ENST00000512868 XIRP1Q702N8 1843 aaKnown RBP21.01■□□□□ 0.95
SERF1A-208ENST00000512868 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
SERF1A-208ENST00000512868 ADGRL3Q9HAR2 1447 aa21.01■□□□□ 0.95
SERF1A-208ENST00000512868 ASXL1Q8IXJ9 1541 aa20.98■□□□□ 0.95
SERF1A-208ENST00000512868 HSPA1LP34931 641 aa20.96■□□□□ 0.95
SERF1A-208ENST00000512868 WAPLQ7Z5K2 1190 aa20.95■□□□□ 0.94
SERF1A-208ENST00000512868 TONSLQ96HA7 1378 aa20.95■□□□□ 0.94
SERF1A-208ENST00000512868 ADGRB1O14514 1584 aa20.93■□□□□ 0.94
SERF1A-208ENST00000512868 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.93■□□□□ 0.94
SERF1A-208ENST00000512868 POGKQ9P215 609 aa20.93■□□□□ 0.94
SERF1A-208ENST00000512868 CLSPNQ9HAW4 1339 aa20.93■□□□□ 0.94
SERF1A-208ENST00000512868 PRAM1Q96QH2 718 aa20.92■□□□□ 0.94
SERF1A-208ENST00000512868 DLC1Q96QB1 1528 aa20.91■□□□□ 0.94
SERF1A-208ENST00000512868 TRAK1Q9UPV9 953 aa20.91■□□□□ 0.94
SERF1A-208ENST00000512868 KNDC1Q76NI1 1749 aa20.9■□□□□ 0.94
SERF1A-208ENST00000512868 MST1RQ04912 1400 aa20.89■□□□□ 0.94
SERF1A-208ENST00000512868 PLEKHH1Q9ULM0 1364 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms