RNA–Protein interactions for RNA: ENST00000512649.1

SERF1A-207, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2 BASIC

Gene SERF1A, Length 846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-207ENST00000512649 TOM1O60784 492 aa24.7■■□□□ 1.54
SERF1A-207ENST00000512649 TMEM131LA2VDJ0 1609 aa24.68■■□□□ 1.54
SERF1A-207ENST00000512649 SCAF1Q9H7N4 1312 aaKnown RBP24.67■■□□□ 1.54
SERF1A-207ENST00000512649 ZNF326Q5BKZ1 582 aaKnown RBP24.67■■□□□ 1.54
SERF1A-207ENST00000512649 NUTM2DQ5VT03 806 aaPredicted RBP24.67■■□□□ 1.54
SERF1A-207ENST00000512649 MYO5BQ9ULV0 1848 aa24.65■■□□□ 1.54
SERF1A-207ENST00000512649 ZFYVE9O95405 1425 aa24.65■■□□□ 1.54
SERF1A-207ENST00000512649 KCNA6P17658 529 aa24.64■■□□□ 1.54
SERF1A-207ENST00000512649 PIP4K2BP78356 416 aa24.64■■□□□ 1.54
SERF1A-207ENST00000512649 PLEKHG1Q9ULL1 1385 aa24.64■■□□□ 1.53
SERF1A-207ENST00000512649 SPHKAPQ2M3C7 1700 aa24.63■■□□□ 1.53
SERF1A-207ENST00000512649 LRRC7Q96NW7 1537 aa24.61■■□□□ 1.53
SERF1A-207ENST00000512649 STRCP1A6NGW2 1772 aa24.6■■□□□ 1.53
SERF1A-207ENST00000512649 ACIN1Q9UKV3 1341 aaKnown RBP24.6■■□□□ 1.53
SERF1A-207ENST00000512649 PROSER2Q86WR7 435 aaPredicted RBP24.59■■□□□ 1.53
SERF1A-207ENST00000512649 TBX22Q9Y458 520 aa24.58■■□□□ 1.53
SERF1A-207ENST00000512649 TRPM2O94759 1503 aa24.56■■□□□ 1.52
SERF1A-207ENST00000512649 SETD5Q9C0A6 1442 aa24.55■■□□□ 1.52
SERF1A-207ENST00000512649 MPHOSPH9Q99550 1183 aa24.55■■□□□ 1.52
SERF1A-207ENST00000512649 FOXD1Q16676 465 aa24.54■■□□□ 1.52
SERF1A-207ENST00000512649 CLTCL1P53675 1640 aa24.51■■□□□ 1.51
SERF1A-207ENST00000512649 TMEM94Q12767 1356 aa24.51■■□□□ 1.51
SERF1A-207ENST00000512649 RBM33Q96EV2 1170 aaKnown RBP24.5■■□□□ 1.51
SERF1A-207ENST00000512649 KIF1BO60333 1816 aa24.48■■□□□ 1.51
SERF1A-207ENST00000512649 ADAMTS13Q76LX8 1427 aa24.47■■□□□ 1.51
SERF1A-207ENST00000512649 VGFO15240 615 aaPredicted RBP24.46■■□□□ 1.51
SERF1A-207ENST00000512649 HSPA1LP34931 641 aa24.46■■□□□ 1.51
SERF1A-207ENST00000512649 NKTRP30414 1462 aaKnown RBP24.45■■□□□ 1.51
SERF1A-207ENST00000512649 PIK3R4Q99570 1358 aa24.45■■□□□ 1.5
SERF1A-207ENST00000512649 RAB3GAP2Q9H2M9 1393 aa24.44■■□□□ 1.5
SERF1A-207ENST00000512649 RPGRIP1LQ68CZ1 1315 aa24.44■■□□□ 1.5
SERF1A-207ENST00000512649 C14orf37Q86TY3 774 aa24.44■■□□□ 1.5
SERF1A-207ENST00000512649 DIP2AQ14689 1571 aa24.44■■□□□ 1.5
SERF1A-207ENST00000512649 NWD1Q149M9 1564 aa24.43■■□□□ 1.5
SERF1A-207ENST00000512649 AMOTL2Q9Y2J4 779 aa24.43■■□□□ 1.5
SERF1A-207ENST00000512649 CCDC144AA2RUR9 1427 aa24.43■■□□□ 1.5
SERF1A-207ENST00000512649 CHD2O14647 1828 aaKnown RBP24.42■■□□□ 1.5
SERF1A-207ENST00000512649 MSH6P52701 1360 aa24.42■■□□□ 1.5
SERF1A-207ENST00000512649 RGL3Q3MIN7 710 aa24.4■■□□□ 1.5
SERF1A-207ENST00000512649 XIRP1Q702N8 1843 aaKnown RBP24.4■■□□□ 1.5
SERF1A-207ENST00000512649 NEXMIFQ5QGS0 1516 aa24.39■■□□□ 1.49
SERF1A-207ENST00000512649 ALKQ9UM73 1620 aa24.38■■□□□ 1.49
SERF1A-207ENST00000512649 SETBP1Q9Y6X0 1596 aa24.37■■□□□ 1.49
SERF1A-207ENST00000512649 DISP3Q9P2K9 1392 aa24.36■■□□□ 1.49
SERF1A-207ENST00000512649 HRCP23327 699 aa24.34■■□□□ 1.49
SERF1A-207ENST00000512649 NCOA3Q9Y6Q9 1424 aa24.34■■□□□ 1.49
SERF1A-207ENST00000512649 METP08581 1390 aa24.33■■□□□ 1.49
SERF1A-207ENST00000512649 PTPRUQ92729 1446 aa24.33■■□□□ 1.49
SERF1A-207ENST00000512649 ATF3P18847 181 aa24.32■■□□□ 1.48
SERF1A-207ENST00000512649 C19orf44Q9H6X5 657 aa24.32■■□□□ 1.48
SERF1A-207ENST00000512649 SLAIN2Q9P270 581 aa24.32■■□□□ 1.48
SERF1A-207ENST00000512649 NRXN3Q9Y4C0 1643 aa24.32■■□□□ 1.48
SERF1A-207ENST00000512649 FAM135BQ49AJ0 1406 aa24.3■■□□□ 1.48
SERF1A-207ENST00000512649 CADPS2Q86UW7 1296 aa24.3■■□□□ 1.48
SERF1A-207ENST00000512649 ANKRD30BQ9BXX2 1392 aa24.27■■□□□ 1.48
SERF1A-207ENST00000512649 SPATA31E1Q6ZUB1 1445 aa24.26■■□□□ 1.47
SERF1A-207ENST00000512649 PPLO60437 1756 aa24.25■■□□□ 1.47
SERF1A-207ENST00000512649 PHF23Q9BUL5 403 aaPredicted RBP24.25■■□□□ 1.47
SERF1A-207ENST00000512649 ADGRF5Q8IZF2 1346 aa24.25■■□□□ 1.47
SERF1A-207ENST00000512649 XRN1Q8IZH2 1706 aaKnown RBP24.2■■□□□ 1.46
SERF1A-207ENST00000512649 ROBO1Q9Y6N7 1651 aa24.2■■□□□ 1.46
SERF1A-207ENST00000512649 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.18■■□□□ 1.46
SERF1A-207ENST00000512649 STK26Q9P289 416 aa24.16■■□□□ 1.46
SERF1A-207ENST00000512649 DCCP43146 1447 aa24.13■■□□□ 1.45
SERF1A-207ENST00000512649 ROBO2Q9HCK4 1378 aa24.13■■□□□ 1.45
SERF1A-207ENST00000512649 PTCH1Q13635 1447 aa24.12■■□□□ 1.45
SERF1A-207ENST00000512649 TMEM132EQ6IEE7 984 aa24.12■■□□□ 1.45
SERF1A-207ENST00000512649 SETD1AO15047 1707 aaKnown RBP24.12■■□□□ 1.45
SERF1A-207ENST00000512649 ADGRL3Q9HAR2 1447 aa24.11■■□□□ 1.45
SERF1A-207ENST00000512649 IFT172Q9UG01 1749 aa24.11■■□□□ 1.45
SERF1A-207ENST00000512649 KDM2AQ9Y2K7 1162 aa24.11■■□□□ 1.45
SERF1A-207ENST00000512649 MED1Q15648 1581 aaPredicted RBP24.1■■□□□ 1.45
SERF1A-207ENST00000512649 PIK3C2GO75747 1445 aa24.1■■□□□ 1.45
SERF1A-207ENST00000512649 BRINP3Q76B58 766 aa24.09■■□□□ 1.45
SERF1A-207ENST00000512649 DCAF11Q8TEB1 546 aa24.09■■□□□ 1.45
SERF1A-207ENST00000512649 C14orf93Q9H972 538 aaKnown RBP24.09■■□□□ 1.45
SERF1A-207ENST00000512649 ILDR2Q71H61 639 aa24.08■■□□□ 1.45
SERF1A-207ENST00000512649 CFAP70Q5T0N1 1121 aa24.07■■□□□ 1.44
SERF1A-207ENST00000512649 PHLPP1O60346 1717 aa24.07■■□□□ 1.44
SERF1A-207ENST00000512649 LRPPRCP42704 1394 aaKnown RBP24.06■■□□□ 1.44
SERF1A-207ENST00000512649 MST1RQ04912 1400 aa24.05■■□□□ 1.44
SERF1A-207ENST00000512649 WAPLQ7Z5K2 1190 aa24.05■■□□□ 1.44
SERF1A-207ENST00000512649 STAC3Q96MF2 364 aa24.05■■□□□ 1.44
SERF1A-207ENST00000512649 MYOM2P54296 1465 aa24.05■■□□□ 1.44
SERF1A-207ENST00000512649 DHX57Q6P158 1386 aaKnown RBP24.04■■□□□ 1.44
SERF1A-207ENST00000512649 PRAG1Q86YV5 1406 aa24.04■■□□□ 1.44
SERF1A-207ENST00000512649 ABCC11Q96J66 1382 aa24.03■■□□□ 1.44
SERF1A-207ENST00000512649 JCADQ9P266 1359 aa24.03■■□□□ 1.44
SERF1A-207ENST00000512649 YTHDC2Q9H6S0 1430 aaKnown RBP24.02■■□□□ 1.44
SERF1A-207ENST00000512649 NALCNQ8IZF0 1738 aa24.02■■□□□ 1.44
SERF1A-207ENST00000512649 NRXN1Q9ULB1 1477 aa24.01■■□□□ 1.43
SERF1A-207ENST00000512649 SIRT1Q96EB6 747 aa23.99■■□□□ 1.43
SERF1A-207ENST00000512649 TECPR2O15040 1411 aa23.99■■□□□ 1.43
SERF1A-207ENST00000512649 C1orf167Q5SNV9 1468 aa23.98■■□□□ 1.43
SERF1A-207ENST00000512649 ASXL1Q8IXJ9 1541 aa23.98■■□□□ 1.43
SERF1A-207ENST00000512649 AHDC1Q5TGY3 1603 aaPredicted RBP23.97■■□□□ 1.43
SERF1A-207ENST00000512649 POGKQ9P215 609 aa23.96■■□□□ 1.43
SERF1A-207ENST00000512649 LAMC1P11047 1609 aa23.95■■□□□ 1.43
SERF1A-207ENST00000512649 LRRC59Q96AG4 307 aaKnown RBP23.95■■□□□ 1.42
SERF1A-207ENST00000512649 ORAI2Q96SN7 254 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms