RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 ZFYVE9O95405 1425 aa23.38■■□□□ 1.33
COL1A1-213ENST00000511732 ILDR2Q71H61 639 aa23.35■■□□□ 1.33
COL1A1-213ENST00000511732 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.33
COL1A1-213ENST00000511732 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
COL1A1-213ENST00000511732 CHGAP10645 457 aaKnown RBP23.31■■□□□ 1.32
COL1A1-213ENST00000511732 KCNA6P17658 529 aa23.31■■□□□ 1.32
COL1A1-213ENST00000511732 PLEKHG1Q9ULL1 1385 aa23.29■■□□□ 1.32
COL1A1-213ENST00000511732 NAIPQ13075 1403 aa23.29■■□□□ 1.32
COL1A1-213ENST00000511732 NWD1Q149M9 1564 aa23.29■■□□□ 1.32
COL1A1-213ENST00000511732 BCANQ96GW7 911 aa23.29■■□□□ 1.32
COL1A1-213ENST00000511732 TMEM94Q12767 1356 aa23.27■■□□□ 1.32
COL1A1-213ENST00000511732 RBM33Q96EV2 1170 aaKnown RBP23.27■■□□□ 1.32
COL1A1-213ENST00000511732 SPHKAPQ2M3C7 1700 aa23.27■■□□□ 1.32
COL1A1-213ENST00000511732 PPP1R15AO75807 674 aaPredicted RBP23.26■■□□□ 1.31
COL1A1-213ENST00000511732 NUTM2DQ5VT03 806 aaPredicted RBP23.26■■□□□ 1.31
COL1A1-213ENST00000511732 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
COL1A1-213ENST00000511732 HDGFP51858 240 aaKnown RBP23.25■■□□□ 1.31
COL1A1-213ENST00000511732 PROSER2Q86WR7 435 aaPredicted RBP23.24■■□□□ 1.31
COL1A1-213ENST00000511732 NKTRP30414 1462 aaKnown RBP23.24■■□□□ 1.31
COL1A1-213ENST00000511732 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.23■■□□□ 1.31
COL1A1-213ENST00000511732 ADAMTS13Q76LX8 1427 aa23.22■■□□□ 1.31
COL1A1-213ENST00000511732 MED1Q15648 1581 aaPredicted RBP23.21■■□□□ 1.31
COL1A1-213ENST00000511732 TBX22Q9Y458 520 aa23.2■■□□□ 1.3
COL1A1-213ENST00000511732 HFM1A2PYH4 1435 aa23.18■■□□□ 1.3
COL1A1-213ENST00000511732 CLTCL1P53675 1640 aa23.17■■□□□ 1.3
COL1A1-213ENST00000511732 DIP2AQ14689 1571 aa23.15■■□□□ 1.3
COL1A1-213ENST00000511732 FAM135BQ49AJ0 1406 aa23.15■■□□□ 1.3
COL1A1-213ENST00000511732 TRPM2O94759 1503 aa23.14■■□□□ 1.3
COL1A1-213ENST00000511732 NRXN3Q9Y4C0 1643 aa23.14■■□□□ 1.29
COL1A1-213ENST00000511732 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
COL1A1-213ENST00000511732 MSH6P52701 1360 aa23.12■■□□□ 1.29
COL1A1-213ENST00000511732 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
COL1A1-213ENST00000511732 PIK3R4Q99570 1358 aa23.11■■□□□ 1.29
COL1A1-213ENST00000511732 PTPRUQ92729 1446 aa23.1■■□□□ 1.29
COL1A1-213ENST00000511732 SOCS7O14512 581 aa23.1■■□□□ 1.29
COL1A1-213ENST00000511732 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
COL1A1-213ENST00000511732 KIF1BO60333 1816 aa23.09■■□□□ 1.29
COL1A1-213ENST00000511732 SETBP1Q9Y6X0 1596 aa23.09■■□□□ 1.29
COL1A1-213ENST00000511732 NEXMIFQ5QGS0 1516 aa23.08■■□□□ 1.29
COL1A1-213ENST00000511732 AMOTL2Q9Y2J4 779 aa23.06■■□□□ 1.28
COL1A1-213ENST00000511732 NCOA3Q9Y6Q9 1424 aa23.06■■□□□ 1.28
COL1A1-213ENST00000511732 SLC4A1APQ9BWU0 796 aaKnown RBP23.05■■□□□ 1.28
COL1A1-213ENST00000511732 SLAIN2Q9P270 581 aa23.04■■□□□ 1.28
COL1A1-213ENST00000511732 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.04■■□□□ 1.28
COL1A1-213ENST00000511732 XRN1Q8IZH2 1706 aaKnown RBP23.03■■□□□ 1.28
COL1A1-213ENST00000511732 METP08581 1390 aa23.01■■□□□ 1.27
COL1A1-213ENST00000511732 FOXD1Q16676 465 aa23■■□□□ 1.27
COL1A1-213ENST00000511732 C14orf37Q86TY3 774 aa23■■□□□ 1.27
COL1A1-213ENST00000511732 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
COL1A1-213ENST00000511732 C19orf44Q9H6X5 657 aa22.98■■□□□ 1.27
COL1A1-213ENST00000511732 PHLPP1O60346 1717 aa22.97■■□□□ 1.27
COL1A1-213ENST00000511732 SETD1AO15047 1707 aaKnown RBP22.96■■□□□ 1.27
COL1A1-213ENST00000511732 CADPS2Q86UW7 1296 aa22.95■■□□□ 1.26
COL1A1-213ENST00000511732 RGS17Q9UGC6 210 aaPredicted RBP22.94■■□□□ 1.26
COL1A1-213ENST00000511732 PPLO60437 1756 aa22.94■■□□□ 1.26
COL1A1-213ENST00000511732 ATF3P18847 181 aa22.93■■□□□ 1.26
COL1A1-213ENST00000511732 COL16A1Q07092 1604 aaPredicted RBP22.93■■□□□ 1.26
COL1A1-213ENST00000511732 MPHOSPH9Q99550 1183 aa22.92■■□□□ 1.26
COL1A1-213ENST00000511732 VGFO15240 615 aaPredicted RBP22.91■■□□□ 1.26
COL1A1-213ENST00000511732 RPGRIP1LQ68CZ1 1315 aa22.9■■□□□ 1.26
COL1A1-213ENST00000511732 DCCP43146 1447 aa22.89■■□□□ 1.25
COL1A1-213ENST00000511732 NALCNQ8IZF0 1738 aa22.88■■□□□ 1.25
COL1A1-213ENST00000511732 AHDC1Q5TGY3 1603 aaPredicted RBP22.87■■□□□ 1.25
COL1A1-213ENST00000511732 CCDC144AA2RUR9 1427 aa22.86■■□□□ 1.25
COL1A1-213ENST00000511732 BRINP3Q76B58 766 aa22.86■■□□□ 1.25
COL1A1-213ENST00000511732 JCADQ9P266 1359 aa22.86■■□□□ 1.25
COL1A1-213ENST00000511732 MST1RQ04912 1400 aa22.85■■□□□ 1.25
COL1A1-213ENST00000511732 SPATA31E1Q6ZUB1 1445 aa22.85■■□□□ 1.25
COL1A1-213ENST00000511732 SETD5Q9C0A6 1442 aa22.85■■□□□ 1.25
COL1A1-213ENST00000511732 ADGRL3Q9HAR2 1447 aa22.85■■□□□ 1.25
COL1A1-213ENST00000511732 IFT172Q9UG01 1749 aa22.83■■□□□ 1.25
COL1A1-213ENST00000511732 ROBO2Q9HCK4 1378 aa22.83■■□□□ 1.25
COL1A1-213ENST00000511732 RGL3Q3MIN7 710 aa22.82■■□□□ 1.24
COL1A1-213ENST00000511732 ASXL1Q8IXJ9 1541 aa22.82■■□□□ 1.24
COL1A1-213ENST00000511732 PTCH1Q13635 1447 aa22.82■■□□□ 1.24
COL1A1-213ENST00000511732 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
COL1A1-213ENST00000511732 PRAG1Q86YV5 1406 aa22.8■■□□□ 1.24
COL1A1-213ENST00000511732 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
COL1A1-213ENST00000511732 RAB3GAP2Q9H2M9 1393 aa22.78■■□□□ 1.24
COL1A1-213ENST00000511732 SHPRHQ149N8 1683 aa22.78■■□□□ 1.24
COL1A1-213ENST00000511732 POTEAQ6S8J7 498 aa22.78■■□□□ 1.24
COL1A1-213ENST00000511732 LRP6O75581 1613 aa22.78■■□□□ 1.24
COL1A1-213ENST00000511732 ACIN1Q9UKV3 1341 aaKnown RBP22.75■■□□□ 1.23
COL1A1-213ENST00000511732 ANKRD30BQ9BXX2 1392 aa22.75■■□□□ 1.23
COL1A1-213ENST00000511732 DDX17Q92841 729 aaKnown RBP22.74■■□□□ 1.23
COL1A1-213ENST00000511732 SPATA31A6Q5VVP1 1343 aa22.74■■□□□ 1.23
COL1A1-213ENST00000511732 C1orf167Q5SNV9 1468 aa22.73■■□□□ 1.23
COL1A1-213ENST00000511732 PIK3C2GO75747 1445 aa22.72■■□□□ 1.23
COL1A1-213ENST00000511732 TMEM132EQ6IEE7 984 aa22.69■■□□□ 1.22
COL1A1-213ENST00000511732 TECPR2O15040 1411 aa22.68■■□□□ 1.22
COL1A1-213ENST00000511732 ORAI2Q96SN7 254 aa22.68■■□□□ 1.22
COL1A1-213ENST00000511732 STK26Q9P289 416 aa22.67■■□□□ 1.22
COL1A1-213ENST00000511732 LAMC1P11047 1609 aa22.67■■□□□ 1.22
COL1A1-213ENST00000511732 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
COL1A1-213ENST00000511732 KNDC1Q76NI1 1749 aa22.66■■□□□ 1.22
COL1A1-213ENST00000511732 WAPLQ7Z5K2 1190 aa22.66■■□□□ 1.22
COL1A1-213ENST00000511732 LRRC59Q96AG4 307 aaKnown RBP22.65■■□□□ 1.22
COL1A1-213ENST00000511732 NRXN1Q9ULB1 1477 aa22.65■■□□□ 1.22
COL1A1-213ENST00000511732 ABCC11Q96J66 1382 aa22.64■■□□□ 1.22
COL1A1-213ENST00000511732 PLEKHH1Q9ULM0 1364 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms