RNA–Protein interactions for RNA: ENST00000511023.1

COL12A1-210, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-210ENST00000511023 CLTCL1P53675 1640 aa21.82■■□□□ 1.08
COL12A1-210ENST00000511023 UBAP1LF5GYI3 381 aa21.82■■□□□ 1.08
COL12A1-210ENST00000511023 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
COL12A1-210ENST00000511023 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
COL12A1-210ENST00000511023 PLEKHG1Q9ULL1 1385 aa21.81■■□□□ 1.08
COL12A1-210ENST00000511023 NUTM2DQ5VT03 806 aaPredicted RBP21.8■■□□□ 1.08
COL12A1-210ENST00000511023 PPP1R15AO75807 674 aaPredicted RBP21.78■■□□□ 1.08
COL12A1-210ENST00000511023 HDGFP51858 240 aaKnown RBP21.78■■□□□ 1.08
COL12A1-210ENST00000511023 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.77■■□□□ 1.08
COL12A1-210ENST00000511023 SETD5Q9C0A6 1442 aa21.77■■□□□ 1.08
COL12A1-210ENST00000511023 BCANQ96GW7 911 aa21.76■■□□□ 1.07
COL12A1-210ENST00000511023 ALKQ9UM73 1620 aa21.76■■□□□ 1.07
COL12A1-210ENST00000511023 KCNA6P17658 529 aa21.75■■□□□ 1.07
COL12A1-210ENST00000511023 FOXD1Q16676 465 aa21.75■■□□□ 1.07
COL12A1-210ENST00000511023 ADAMTS13Q76LX8 1427 aa21.74■■□□□ 1.07
COL12A1-210ENST00000511023 XIRP1Q702N8 1843 aaKnown RBP21.73■■□□□ 1.07
COL12A1-210ENST00000511023 MPHOSPH9Q99550 1183 aa21.73■■□□□ 1.07
COL12A1-210ENST00000511023 NWD1Q149M9 1564 aa21.73■■□□□ 1.07
COL12A1-210ENST00000511023 ZNF326Q5BKZ1 582 aaKnown RBP21.71■■□□□ 1.07
COL12A1-210ENST00000511023 TBX22Q9Y458 520 aa21.71■■□□□ 1.07
COL12A1-210ENST00000511023 RAB3GAP2Q9H2M9 1393 aa21.71■■□□□ 1.07
COL12A1-210ENST00000511023 KIF1BO60333 1816 aa21.71■■□□□ 1.07
COL12A1-210ENST00000511023 NEXMIFQ5QGS0 1516 aa21.7■■□□□ 1.06
COL12A1-210ENST00000511023 TOM1O60784 492 aa21.69■■□□□ 1.06
COL12A1-210ENST00000511023 CHD2O14647 1828 aaKnown RBP21.69■■□□□ 1.06
COL12A1-210ENST00000511023 PIP4K2BP78356 416 aa21.68■■□□□ 1.06
COL12A1-210ENST00000511023 TMEM94Q12767 1356 aa21.68■■□□□ 1.06
COL12A1-210ENST00000511023 DIP2AQ14689 1571 aa21.68■■□□□ 1.06
COL12A1-210ENST00000511023 NRXN3Q9Y4C0 1643 aa21.68■■□□□ 1.06
COL12A1-210ENST00000511023 NKTRP30414 1462 aaKnown RBP21.67■■□□□ 1.06
COL12A1-210ENST00000511023 RBM33Q96EV2 1170 aaKnown RBP21.67■■□□□ 1.06
COL12A1-210ENST00000511023 SETBP1Q9Y6X0 1596 aa21.65■■□□□ 1.06
COL12A1-210ENST00000511023 PROSER2Q86WR7 435 aaPredicted RBP21.65■■□□□ 1.06
COL12A1-210ENST00000511023 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.05
COL12A1-210ENST00000511023 ACIN1Q9UKV3 1341 aaKnown RBP21.63■■□□□ 1.05
COL12A1-210ENST00000511023 PTPRUQ92729 1446 aa21.63■■□□□ 1.05
COL12A1-210ENST00000511023 PIK3R4Q99570 1358 aa21.61■■□□□ 1.05
COL12A1-210ENST00000511023 CCDC144AA2RUR9 1427 aa21.61■■□□□ 1.05
COL12A1-210ENST00000511023 HSPA1LP34931 641 aa21.59■■□□□ 1.05
COL12A1-210ENST00000511023 SPATA31E1Q6ZUB1 1445 aa21.59■■□□□ 1.05
COL12A1-210ENST00000511023 METP08581 1390 aa21.59■■□□□ 1.05
COL12A1-210ENST00000511023 RPGRIP1LQ68CZ1 1315 aa21.57■■□□□ 1.04
COL12A1-210ENST00000511023 PPLO60437 1756 aa21.57■■□□□ 1.04
COL12A1-210ENST00000511023 AMOTL2Q9Y2J4 779 aa21.57■■□□□ 1.04
COL12A1-210ENST00000511023 XRN1Q8IZH2 1706 aaKnown RBP21.55■■□□□ 1.04
COL12A1-210ENST00000511023 VGFO15240 615 aaPredicted RBP21.55■■□□□ 1.04
COL12A1-210ENST00000511023 HRCP23327 699 aa21.54■■□□□ 1.04
COL12A1-210ENST00000511023 SETD1AO15047 1707 aaKnown RBP21.53■■□□□ 1.04
COL12A1-210ENST00000511023 RGL3Q3MIN7 710 aa21.53■■□□□ 1.04
COL12A1-210ENST00000511023 NCOA3Q9Y6Q9 1424 aa21.52■■□□□ 1.04
COL12A1-210ENST00000511023 MSH6P52701 1360 aa21.51■■□□□ 1.03
COL12A1-210ENST00000511023 IFT172Q9UG01 1749 aa21.51■■□□□ 1.03
COL12A1-210ENST00000511023 ADGRF5Q8IZF2 1346 aa21.5■■□□□ 1.03
COL12A1-210ENST00000511023 ANKRD30BQ9BXX2 1392 aa21.49■■□□□ 1.03
COL12A1-210ENST00000511023 FAM135BQ49AJ0 1406 aa21.48■■□□□ 1.03
COL12A1-210ENST00000511023 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.46■■□□□ 1.03
COL12A1-210ENST00000511023 ROBO1Q9Y6N7 1651 aa21.45■■□□□ 1.02
COL12A1-210ENST00000511023 C14orf37Q86TY3 774 aa21.45■■□□□ 1.02
COL12A1-210ENST00000511023 C19orf44Q9H6X5 657 aa21.44■■□□□ 1.02
COL12A1-210ENST00000511023 SLAIN2Q9P270 581 aa21.44■■□□□ 1.02
COL12A1-210ENST00000511023 PIK3C2GO75747 1445 aa21.41■■□□□ 1.02
COL12A1-210ENST00000511023 ROBO2Q9HCK4 1378 aa21.41■■□□□ 1.02
COL12A1-210ENST00000511023 DISP3Q9P2K9 1392 aa21.41■■□□□ 1.02
COL12A1-210ENST00000511023 PTCH1Q13635 1447 aa21.4■■□□□ 1.02
COL12A1-210ENST00000511023 PRAG1Q86YV5 1406 aa21.4■■□□□ 1.02
COL12A1-210ENST00000511023 CADPS2Q86UW7 1296 aa21.39■■□□□ 1.01
COL12A1-210ENST00000511023 ASXL1Q8IXJ9 1541 aa21.39■■□□□ 1.01
COL12A1-210ENST00000511023 NRXN1Q9ULB1 1477 aa21.39■■□□□ 1.01
COL12A1-210ENST00000511023 ATF3P18847 181 aa21.38■■□□□ 1.01
COL12A1-210ENST00000511023 NALCNQ8IZF0 1738 aa21.38■■□□□ 1.01
COL12A1-210ENST00000511023 DCCP43146 1447 aa21.38■■□□□ 1.01
COL12A1-210ENST00000511023 ADGRL3Q9HAR2 1447 aa21.38■■□□□ 1.01
COL12A1-210ENST00000511023 MYOM2P54296 1465 aa21.37■■□□□ 1.01
COL12A1-210ENST00000511023 MED1Q15648 1581 aaPredicted RBP21.35■■□□□ 1.01
COL12A1-210ENST00000511023 TMEM132EQ6IEE7 984 aa21.34■■□□□ 1.01
COL12A1-210ENST00000511023 MST1RQ04912 1400 aa21.33■■□□□ 1.01
COL12A1-210ENST00000511023 C14orf93Q9H972 538 aaKnown RBP21.32■■□□□ 1
COL12A1-210ENST00000511023 LRPPRCP42704 1394 aaKnown RBP21.32■■□□□ 1
COL12A1-210ENST00000511023 TECPR2O15040 1411 aa21.31■■□□□ 1
COL12A1-210ENST00000511023 CFAP70Q5T0N1 1121 aa21.31■■□□□ 1
COL12A1-210ENST00000511023 STK26Q9P289 416 aa21.31■■□□□ 1
COL12A1-210ENST00000511023 PHLPP1O60346 1717 aa21.3■■□□□ 1
COL12A1-210ENST00000511023 BRINP3Q76B58 766 aa21.3■■□□□ 1
COL12A1-210ENST00000511023 DHX57Q6P158 1386 aaKnown RBP21.3■■□□□ 1
COL12A1-210ENST00000511023 ABCC11Q96J66 1382 aa21.29■■□□□ 1
COL12A1-210ENST00000511023 YTHDC2Q9H6S0 1430 aaKnown RBP21.29■■□□□ 1
COL12A1-210ENST00000511023 ILDR2Q71H61 639 aa21.28■■□□□ 1
COL12A1-210ENST00000511023 KNDC1Q76NI1 1749 aa21.28■■□□□ 1
COL12A1-210ENST00000511023 COL16A1Q07092 1604 aaPredicted RBP21.28■■□□□ 1
COL12A1-210ENST00000511023 LAMC1P11047 1609 aa21.27■■□□□ 1
COL12A1-210ENST00000511023 AHDC1Q5TGY3 1603 aaPredicted RBP21.27■■□□□ 1
COL12A1-210ENST00000511023 WAPLQ7Z5K2 1190 aa21.27■■□□□ 1
COL12A1-210ENST00000511023 DCAF11Q8TEB1 546 aa21.27■■□□□ 1
COL12A1-210ENST00000511023 PLEKHH1Q9ULM0 1364 aa21.26■□□□□ 0.99
COL12A1-210ENST00000511023 KDM2AQ9Y2K7 1162 aa21.26■□□□□ 0.99
COL12A1-210ENST00000511023 C1orf167Q5SNV9 1468 aa21.24■□□□□ 0.99
COL12A1-210ENST00000511023 ADGRB1O14514 1584 aa21.23■□□□□ 0.99
COL12A1-210ENST00000511023 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
COL12A1-210ENST00000511023 NHSL1Q5SYE7 1610 aa21.21■□□□□ 0.99
COL12A1-210ENST00000511023 SIRT1Q96EB6 747 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms