RNA–Protein interactions for RNA: ENST00000510801.5

COPS4-208, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 381 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-208ENST00000510801 SPHKAPQ2M3C7 1700 aa18.57■□□□□ 0.56
COPS4-208ENST00000510801 MPHOSPH9Q99550 1183 aa18.56■□□□□ 0.56
COPS4-208ENST00000510801 CPS1P31327 1500 aa18.55■□□□□ 0.56
COPS4-208ENST00000510801 RIMS2Q9UQ26 1411 aa18.55■□□□□ 0.56
COPS4-208ENST00000510801 PLEKHG1Q9ULL1 1385 aa18.55■□□□□ 0.56
COPS4-208ENST00000510801 CLTCL1P53675 1640 aa18.49■□□□□ 0.55
COPS4-208ENST00000510801 ILDR1Q86SU0 546 aaPredicted RBP18.49■□□□□ 0.55
COPS4-208ENST00000510801 TBX22Q9Y458 520 aa18.48■□□□□ 0.55
COPS4-208ENST00000510801 RPGRIP1LQ68CZ1 1315 aa18.48■□□□□ 0.55
COPS4-208ENST00000510801 CHGAP10645 457 aaKnown RBP18.47■□□□□ 0.55
COPS4-208ENST00000510801 PIK3R4Q99570 1358 aa18.45■□□□□ 0.54
COPS4-208ENST00000510801 PPP1R15AO75807 674 aaPredicted RBP18.45■□□□□ 0.54
COPS4-208ENST00000510801 CCDC144AA2RUR9 1427 aa18.45■□□□□ 0.54
COPS4-208ENST00000510801 DIP2AQ14689 1571 aa18.44■□□□□ 0.54
COPS4-208ENST00000510801 ADAMTS13Q76LX8 1427 aa18.44■□□□□ 0.54
COPS4-208ENST00000510801 KCNA6P17658 529 aa18.44■□□□□ 0.54
COPS4-208ENST00000510801 MYO5BQ9ULV0 1848 aa18.44■□□□□ 0.54
COPS4-208ENST00000510801 FOXD1Q16676 465 aa18.43■□□□□ 0.54
COPS4-208ENST00000510801 NEXMIFQ5QGS0 1516 aa18.43■□□□□ 0.54
COPS4-208ENST00000510801 SPATA31E1Q6ZUB1 1445 aa18.42■□□□□ 0.54
COPS4-208ENST00000510801 SLC26A8Q96RN1 970 aa18.42■□□□□ 0.54
COPS4-208ENST00000510801 LRRC7Q96NW7 1537 aa18.42■□□□□ 0.54
COPS4-208ENST00000510801 SETBP1Q9Y6X0 1596 aa18.42■□□□□ 0.54
COPS4-208ENST00000510801 NWD1Q149M9 1564 aa18.41■□□□□ 0.54
COPS4-208ENST00000510801 ANKRD30BQ9BXX2 1392 aa18.41■□□□□ 0.54
COPS4-208ENST00000510801 NKTRP30414 1462 aaKnown RBP18.4■□□□□ 0.54
COPS4-208ENST00000510801 VGFO15240 615 aaPredicted RBP18.4■□□□□ 0.54
COPS4-208ENST00000510801 ZNF326Q5BKZ1 582 aaKnown RBP18.4■□□□□ 0.54
COPS4-208ENST00000510801 KIF1BO60333 1816 aa18.39■□□□□ 0.53
COPS4-208ENST00000510801 STRCP1A6NGW2 1772 aa18.37■□□□□ 0.53
COPS4-208ENST00000510801 NCOA3Q9Y6Q9 1424 aa18.37■□□□□ 0.53
COPS4-208ENST00000510801 BCANQ96GW7 911 aa18.35■□□□□ 0.53
COPS4-208ENST00000510801 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
COPS4-208ENST00000510801 NUTM2DQ5VT03 806 aaPredicted RBP18.34■□□□□ 0.53
COPS4-208ENST00000510801 TOM1O60784 492 aa18.33■□□□□ 0.52
COPS4-208ENST00000510801 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
COPS4-208ENST00000510801 TRIM26Q12899 539 aaPredicted RBP18.32■□□□□ 0.52
COPS4-208ENST00000510801 STAC3Q96MF2 364 aa18.31■□□□□ 0.52
COPS4-208ENST00000510801 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
COPS4-208ENST00000510801 CHD2O14647 1828 aaKnown RBP18.3■□□□□ 0.52
COPS4-208ENST00000510801 UBAP1LF5GYI3 381 aa18.3■□□□□ 0.52
COPS4-208ENST00000510801 PTPRUQ92729 1446 aa18.29■□□□□ 0.52
COPS4-208ENST00000510801 METP08581 1390 aa18.29■□□□□ 0.52
COPS4-208ENST00000510801 NRXN1Q9ULB1 1477 aa18.28■□□□□ 0.52
COPS4-208ENST00000510801 PPLO60437 1756 aa18.28■□□□□ 0.52
COPS4-208ENST00000510801 PROSER2Q86WR7 435 aaPredicted RBP18.28■□□□□ 0.52
COPS4-208ENST00000510801 ALKQ9UM73 1620 aa18.27■□□□□ 0.52
COPS4-208ENST00000510801 MYOM2P54296 1465 aa18.27■□□□□ 0.52
COPS4-208ENST00000510801 AMOTL2Q9Y2J4 779 aa18.27■□□□□ 0.52
COPS4-208ENST00000510801 PIK3C2GO75747 1445 aa18.26■□□□□ 0.51
COPS4-208ENST00000510801 RGL3Q3MIN7 710 aa18.26■□□□□ 0.51
COPS4-208ENST00000510801 XRN1Q8IZH2 1706 aaKnown RBP18.25■□□□□ 0.51
COPS4-208ENST00000510801 ADGRF5Q8IZF2 1346 aa18.24■□□□□ 0.51
COPS4-208ENST00000510801 IFT172Q9UG01 1749 aa18.24■□□□□ 0.51
COPS4-208ENST00000510801 PTCH1Q13635 1447 aa18.23■□□□□ 0.51
COPS4-208ENST00000510801 XIRP1Q702N8 1843 aaKnown RBP18.23■□□□□ 0.51
COPS4-208ENST00000510801 SETD1AO15047 1707 aaKnown RBP18.23■□□□□ 0.51
COPS4-208ENST00000510801 MSH6P52701 1360 aa18.22■□□□□ 0.51
COPS4-208ENST00000510801 C19orf44Q9H6X5 657 aa18.21■□□□□ 0.51
COPS4-208ENST00000510801 DCCP43146 1447 aa18.21■□□□□ 0.51
COPS4-208ENST00000510801 FAM135BQ49AJ0 1406 aa18.21■□□□□ 0.51
COPS4-208ENST00000510801 C14orf93Q9H972 538 aaKnown RBP18.2■□□□□ 0.5
COPS4-208ENST00000510801 TECPR2O15040 1411 aa18.2■□□□□ 0.5
COPS4-208ENST00000510801 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
COPS4-208ENST00000510801 ABCC11Q96J66 1382 aa18.17■□□□□ 0.5
COPS4-208ENST00000510801 CADPS2Q86UW7 1296 aa18.17■□□□□ 0.5
COPS4-208ENST00000510801 SIRT1Q96EB6 747 aa18.16■□□□□ 0.5
COPS4-208ENST00000510801 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
COPS4-208ENST00000510801 PIP4K2BP78356 416 aa18.14■□□□□ 0.49
COPS4-208ENST00000510801 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.49
COPS4-208ENST00000510801 ROBO2Q9HCK4 1378 aa18.14■□□□□ 0.49
COPS4-208ENST00000510801 ADGRL3Q9HAR2 1447 aa18.14■□□□□ 0.49
COPS4-208ENST00000510801 ASXL1Q8IXJ9 1541 aa18.13■□□□□ 0.49
COPS4-208ENST00000510801 LAMC1P11047 1609 aa18.13■□□□□ 0.49
COPS4-208ENST00000510801 SLAIN2Q9P270 581 aa18.13■□□□□ 0.49
COPS4-208ENST00000510801 DCAF11Q8TEB1 546 aa18.12■□□□□ 0.49
COPS4-208ENST00000510801 YTHDC2Q9H6S0 1430 aaKnown RBP18.1■□□□□ 0.49
COPS4-208ENST00000510801 ATF3P18847 181 aa18.1■□□□□ 0.49
COPS4-208ENST00000510801 HSPA1LP34931 641 aa18.09■□□□□ 0.49
COPS4-208ENST00000510801 CFAP70Q5T0N1 1121 aa18.09■□□□□ 0.49
COPS4-208ENST00000510801 C14orf37Q86TY3 774 aa18.09■□□□□ 0.49
COPS4-208ENST00000510801 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.09■□□□□ 0.49
COPS4-208ENST00000510801 ADGRB1O14514 1584 aa18.08■□□□□ 0.49
COPS4-208ENST00000510801 KNDC1Q76NI1 1749 aa18.07■□□□□ 0.48
COPS4-208ENST00000510801 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
COPS4-208ENST00000510801 TMEM132EQ6IEE7 984 aa18.07■□□□□ 0.48
COPS4-208ENST00000510801 DLC1Q96QB1 1528 aa18.07■□□□□ 0.48
COPS4-208ENST00000510801 MST1RQ04912 1400 aa18.06■□□□□ 0.48
COPS4-208ENST00000510801 KDM2AQ9Y2K7 1162 aa18.04■□□□□ 0.48
COPS4-208ENST00000510801 ROBO1Q9Y6N7 1651 aa18.03■□□□□ 0.48
COPS4-208ENST00000510801 CDC42BPGQ6DT37 1551 aa18.02■□□□□ 0.48
COPS4-208ENST00000510801 NALCNQ8IZF0 1738 aa18.02■□□□□ 0.48
COPS4-208ENST00000510801 L3MBTL2Q969R5 705 aa18.02■□□□□ 0.48
COPS4-208ENST00000510801 BRINP3Q76B58 766 aa18.01■□□□□ 0.47
COPS4-208ENST00000510801 SIN3AQ96ST3 1273 aa18.01■□□□□ 0.47
COPS4-208ENST00000510801 STK26Q9P289 416 aa18■□□□□ 0.47
COPS4-208ENST00000510801 KIAA1210Q9ULL0 1709 aa18■□□□□ 0.47
COPS4-208ENST00000510801 C1orf167Q5SNV9 1468 aa18■□□□□ 0.47
COPS4-208ENST00000510801 AHDC1Q5TGY3 1603 aaPredicted RBP17.99■□□□□ 0.47
COPS4-208ENST00000510801 WAPLQ7Z5K2 1190 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms