RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 NAIPQ13075 1403 aa33.5■■■□□ 2.95
PACRGL-220ENST00000508952 XIRP1Q702N8 1843 aaKnown RBP33.49■■■□□ 2.95
PACRGL-220ENST00000508952 RIMS2Q9UQ26 1411 aa33.49■■■□□ 2.95
PACRGL-220ENST00000508952 BCANQ96GW7 911 aa33.45■■■□□ 2.95
PACRGL-220ENST00000508952 DISP3Q9P2K9 1392 aa33.45■■■□□ 2.94
PACRGL-220ENST00000508952 SPHKAPQ2M3C7 1700 aa33.45■■■□□ 2.94
PACRGL-220ENST00000508952 PPP1R15AO75807 674 aaPredicted RBP33.43■■■□□ 2.94
PACRGL-220ENST00000508952 HSPA1LP34931 641 aa33.42■■■□□ 2.94
PACRGL-220ENST00000508952 PLEKHG1Q9ULL1 1385 aa33.42■■■□□ 2.94
PACRGL-220ENST00000508952 KCNA6P17658 529 aa33.39■■■□□ 2.94
PACRGL-220ENST00000508952 HFM1A2PYH4 1435 aa33.38■■■□□ 2.93
PACRGL-220ENST00000508952 HDGFP51858 240 aaKnown RBP33.38■■■□□ 2.93
PACRGL-220ENST00000508952 NUTM2DQ5VT03 806 aaPredicted RBP33.38■■■□□ 2.93
PACRGL-220ENST00000508952 NWD1Q149M9 1564 aa33.38■■■□□ 2.93
PACRGL-220ENST00000508952 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.35■■■□□ 2.93
PACRGL-220ENST00000508952 TMEM94Q12767 1356 aa33.34■■■□□ 2.93
PACRGL-220ENST00000508952 CHD2O14647 1828 aaKnown RBP33.32■■■□□ 2.92
PACRGL-220ENST00000508952 NKTRP30414 1462 aaKnown RBP33.31■■■□□ 2.92
PACRGL-220ENST00000508952 PROSER2Q86WR7 435 aaPredicted RBP33.31■■■□□ 2.92
PACRGL-220ENST00000508952 RBM33Q96EV2 1170 aaKnown RBP33.31■■■□□ 2.92
PACRGL-220ENST00000508952 CLTCL1P53675 1640 aa33.29■■■□□ 2.92
PACRGL-220ENST00000508952 TRIM52Q96A61 297 aa33.29■■■□□ 2.92
PACRGL-220ENST00000508952 TRPM2O94759 1503 aa33.27■■■□□ 2.92
PACRGL-220ENST00000508952 ADAMTS13Q76LX8 1427 aa33.27■■■□□ 2.92
PACRGL-220ENST00000508952 TBX22Q9Y458 520 aa33.25■■■□□ 2.91
PACRGL-220ENST00000508952 DIP2AQ14689 1571 aa33.24■■■□□ 2.91
PACRGL-220ENST00000508952 ZNF326Q5BKZ1 582 aaKnown RBP33.21■■■□□ 2.91
PACRGL-220ENST00000508952 ILDR2Q71H61 639 aa33.21■■■□□ 2.91
PACRGL-220ENST00000508952 KIF1BO60333 1816 aa33.19■■■□□ 2.9
PACRGL-220ENST00000508952 NRXN3Q9Y4C0 1643 aa33.17■■■□□ 2.9
PACRGL-220ENST00000508952 SLC4A1APQ9BWU0 796 aaKnown RBP33.17■■■□□ 2.9
PACRGL-220ENST00000508952 MED1Q15648 1581 aaPredicted RBP33.16■■■□□ 2.9
PACRGL-220ENST00000508952 SETBP1Q9Y6X0 1596 aa33.13■■■□□ 2.89
PACRGL-220ENST00000508952 NEXMIFQ5QGS0 1516 aa33.13■■■□□ 2.89
PACRGL-220ENST00000508952 MSH6P52701 1360 aa33.13■■■□□ 2.89
PACRGL-220ENST00000508952 PIK3R4Q99570 1358 aa33.12■■■□□ 2.89
PACRGL-220ENST00000508952 FAM135BQ49AJ0 1406 aa33.11■■■□□ 2.89
PACRGL-220ENST00000508952 ROBO1Q9Y6N7 1651 aa33.11■■■□□ 2.89
PACRGL-220ENST00000508952 PTPRUQ92729 1446 aa33.1■■■□□ 2.89
PACRGL-220ENST00000508952 FOXD1Q16676 465 aa33.06■■■□□ 2.88
PACRGL-220ENST00000508952 AMOTL2Q9Y2J4 779 aa33.05■■■□□ 2.88
PACRGL-220ENST00000508952 XRN1Q8IZH2 1706 aaKnown RBP33.03■■■□□ 2.88
PACRGL-220ENST00000508952 C14orf37Q86TY3 774 aa33.03■■■□□ 2.88
PACRGL-220ENST00000508952 NCOA3Q9Y6Q9 1424 aa33.02■■■□□ 2.88
PACRGL-220ENST00000508952 SIPA1L2Q9P2F8 1722 aaPredicted RBP33■■■□□ 2.87
PACRGL-220ENST00000508952 METP08581 1390 aa33■■■□□ 2.87
PACRGL-220ENST00000508952 SLAIN2Q9P270 581 aa33■■■□□ 2.87
PACRGL-220ENST00000508952 MPHOSPH9Q99550 1183 aa32.96■■■□□ 2.87
PACRGL-220ENST00000508952 PPLO60437 1756 aa32.96■■■□□ 2.87
PACRGL-220ENST00000508952 C19orf44Q9H6X5 657 aa32.93■■■□□ 2.86
PACRGL-220ENST00000508952 SETD5Q9C0A6 1442 aa32.93■■■□□ 2.86
PACRGL-220ENST00000508952 SETD1AO15047 1707 aaKnown RBP32.91■■■□□ 2.86
PACRGL-220ENST00000508952 PHLPP1O60346 1717 aa32.91■■■□□ 2.86
PACRGL-220ENST00000508952 VGFO15240 615 aaPredicted RBP32.91■■■□□ 2.86
PACRGL-220ENST00000508952 CCDC144AA2RUR9 1427 aa32.91■■■□□ 2.86
PACRGL-220ENST00000508952 RPGRIP1LQ68CZ1 1315 aa32.9■■■□□ 2.86
PACRGL-220ENST00000508952 ATF3P18847 181 aa32.89■■■□□ 2.86
PACRGL-220ENST00000508952 PHF23Q9BUL5 403 aaPredicted RBP32.89■■■□□ 2.86
PACRGL-220ENST00000508952 SOCS7O14512 581 aa32.88■■■□□ 2.85
PACRGL-220ENST00000508952 CADPS2Q86UW7 1296 aa32.88■■■□□ 2.85
PACRGL-220ENST00000508952 SPATA31E1Q6ZUB1 1445 aa32.83■■■□□ 2.85
PACRGL-220ENST00000508952 RAB3GAP2Q9H2M9 1393 aa32.83■■■□□ 2.85
PACRGL-220ENST00000508952 DCCP43146 1447 aa32.82■■■□□ 2.84
PACRGL-220ENST00000508952 RGL3Q3MIN7 710 aa32.81■■■□□ 2.84
PACRGL-220ENST00000508952 NALCNQ8IZF0 1738 aa32.81■■■□□ 2.84
PACRGL-220ENST00000508952 COL16A1Q07092 1604 aaPredicted RBP32.8■■■□□ 2.84
PACRGL-220ENST00000508952 IFT172Q9UG01 1749 aa32.8■■■□□ 2.84
PACRGL-220ENST00000508952 ACIN1Q9UKV3 1341 aaKnown RBP32.78■■■□□ 2.84
PACRGL-220ENST00000508952 ADGRL3Q9HAR2 1447 aa32.78■■■□□ 2.84
PACRGL-220ENST00000508952 ADGRF5Q8IZF2 1346 aa32.76■■■□□ 2.83
PACRGL-220ENST00000508952 AHDC1Q5TGY3 1603 aaPredicted RBP32.75■■■□□ 2.83
PACRGL-220ENST00000508952 MST1RQ04912 1400 aa32.75■■■□□ 2.83
PACRGL-220ENST00000508952 PTCH1Q13635 1447 aa32.75■■■□□ 2.83
PACRGL-220ENST00000508952 ROBO2Q9HCK4 1378 aa32.74■■■□□ 2.83
PACRGL-220ENST00000508952 BRINP3Q76B58 766 aa32.73■■■□□ 2.83
PACRGL-220ENST00000508952 JCADQ9P266 1359 aa32.72■■■□□ 2.83
PACRGL-220ENST00000508952 ANKRD30BQ9BXX2 1392 aa32.7■■■□□ 2.83
PACRGL-220ENST00000508952 ASXL1Q8IXJ9 1541 aa32.7■■■□□ 2.83
PACRGL-220ENST00000508952 RGS17Q9UGC6 210 aaPredicted RBP32.69■■■□□ 2.82
PACRGL-220ENST00000508952 PRAG1Q86YV5 1406 aa32.68■■■□□ 2.82
PACRGL-220ENST00000508952 NHSL1Q5SYE7 1610 aa32.63■■■□□ 2.81
PACRGL-220ENST00000508952 PIK3C2GO75747 1445 aa32.62■■■□□ 2.81
PACRGL-220ENST00000508952 SHPRHQ149N8 1683 aa32.62■■■□□ 2.81
PACRGL-220ENST00000508952 STK26Q9P289 416 aa32.58■■■□□ 2.81
PACRGL-220ENST00000508952 C1orf167Q5SNV9 1468 aa32.58■■■□□ 2.81
PACRGL-220ENST00000508952 TMEM132EQ6IEE7 984 aa32.57■■■□□ 2.8
PACRGL-220ENST00000508952 LRP6O75581 1613 aa32.57■■■□□ 2.8
PACRGL-220ENST00000508952 DDX17Q92841 729 aaKnown RBP32.56■■■□□ 2.8
PACRGL-220ENST00000508952 LRPPRCP42704 1394 aaKnown RBP32.55■■■□□ 2.8
PACRGL-220ENST00000508952 SPATA31A6Q5VVP1 1343 aa32.54■■■□□ 2.8
PACRGL-220ENST00000508952 KNDC1Q76NI1 1749 aa32.54■■■□□ 2.8
PACRGL-220ENST00000508952 TECPR2O15040 1411 aa32.53■■■□□ 2.8
PACRGL-220ENST00000508952 MYOM2P54296 1465 aa32.53■■■□□ 2.8
PACRGL-220ENST00000508952 NRXN1Q9ULB1 1477 aa32.53■■■□□ 2.8
PACRGL-220ENST00000508952 POTEAQ6S8J7 498 aa32.52■■■□□ 2.8
PACRGL-220ENST00000508952 CDC42BPGQ6DT37 1551 aa32.5■■■□□ 2.79
PACRGL-220ENST00000508952 WAPLQ7Z5K2 1190 aa32.5■■■□□ 2.79
PACRGL-220ENST00000508952 ABCC11Q96J66 1382 aa32.49■■■□□ 2.79
PACRGL-220ENST00000508952 HRCP23327 699 aa32.49■■■□□ 2.79
PACRGL-220ENST00000508952 ORAI2Q96SN7 254 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms