RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 PLPPR3Q6T4P5 718 aa15.6■□□□□ 0.09
POLR2J3-214ENST00000508910 CEP170BQ9Y4F5 1589 aaPredicted RBP15.59■□□□□ 0.09
POLR2J3-214ENST00000508910 STAG3Q9UJ98 1225 aa15.59■□□□□ 0.09
POLR2J3-214ENST00000508910 PRAG1Q86YV5 1406 aa15.59■□□□□ 0.09
POLR2J3-214ENST00000508910 NRXN1Q9ULB1 1477 aa15.57■□□□□ 0.08
POLR2J3-214ENST00000508910 SETD1BQ9UPS6 1966 aaKnown RBP15.56■□□□□ 0.08
POLR2J3-214ENST00000508910 KDM2AQ9Y2K7 1162 aa15.56■□□□□ 0.08
POLR2J3-214ENST00000508910 RALGAPBQ86X10 1494 aa15.56■□□□□ 0.08
POLR2J3-214ENST00000508910 TRPM1Q7Z4N2 1603 aa15.55■□□□□ 0.08
POLR2J3-214ENST00000508910 ZFYVE9O95405 1425 aa15.55■□□□□ 0.08
POLR2J3-214ENST00000508910 RIMS2Q9UQ26 1411 aa15.54■□□□□ 0.08
POLR2J3-214ENST00000508910 KDM4FA0A1W2PPD8 638 aa15.54■□□□□ 0.08
POLR2J3-214ENST00000508910 NBPF8Q3BBV2 869 aa15.54■□□□□ 0.08
POLR2J3-214ENST00000508910 KIAA1210Q9ULL0 1709 aa15.54■□□□□ 0.08
POLR2J3-214ENST00000508910 SLIT1O75093 1534 aa15.53■□□□□ 0.08
POLR2J3-214ENST00000508910 PIK3C2GO75747 1445 aa15.52■□□□□ 0.08
POLR2J3-214ENST00000508910 TMEM2Q9UHN6 1383 aa15.52■□□□□ 0.08
POLR2J3-214ENST00000508910 ARHGAP23Q9P227 1491 aa15.52■□□□□ 0.07
POLR2J3-214ENST00000508910 LAMC1P11047 1609 aa15.51■□□□□ 0.07
POLR2J3-214ENST00000508910 VGFO15240 615 aaPredicted RBP15.51■□□□□ 0.07
POLR2J3-214ENST00000508910 ADGRF5Q8IZF2 1346 aa15.5■□□□□ 0.07
POLR2J3-214ENST00000508910 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.5■□□□□ 0.07
POLR2J3-214ENST00000508910 THEMISQ8N1K5 641 aaPredicted RBP15.49■□□□□ 0.07
POLR2J3-214ENST00000508910 HDGFP51858 240 aaKnown RBP15.48■□□□□ 0.07
POLR2J3-214ENST00000508910 ROCK2O75116 1388 aaKnown RBP15.48■□□□□ 0.07
POLR2J3-214ENST00000508910 GPRASP1Q5JY77 1395 aa15.48■□□□□ 0.07
POLR2J3-214ENST00000508910 SETBP1Q9Y6X0 1596 aa15.46■□□□□ 0.07
POLR2J3-214ENST00000508910 NUTM2DQ5VT03 806 aaPredicted RBP15.46■□□□□ 0.07
POLR2J3-214ENST00000508910 SCAF11Q99590 1463 aaKnown RBP15.45■□□□□ 0.06
POLR2J3-214ENST00000508910 NRXN3Q9Y4C0 1643 aa15.44■□□□□ 0.06
POLR2J3-214ENST00000508910 EID1Q9Y6B2 187 aa15.44■□□□□ 0.06
POLR2J3-214ENST00000508910 IQGAP1P46940 1657 aa15.44■□□□□ 0.06
POLR2J3-214ENST00000508910 PLEKHG1Q9ULL1 1385 aa15.43■□□□□ 0.06
POLR2J3-214ENST00000508910 ALKQ9UM73 1620 aa15.43■□□□□ 0.06
POLR2J3-214ENST00000508910 ADGRB1O14514 1584 aa15.42■□□□□ 0.06
POLR2J3-214ENST00000508910 CARD11Q9BXL7 1154 aa15.42■□□□□ 0.06
POLR2J3-214ENST00000508910 C14orf93Q9H972 538 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-214ENST00000508910 SETD1AO15047 1707 aaKnown RBP15.42■□□□□ 0.06
POLR2J3-214ENST00000508910 POLR1AO95602 1720 aaPredicted RBP15.42■□□□□ 0.06
POLR2J3-214ENST00000508910 USP47Q96K76 1375 aa15.41■□□□□ 0.06
POLR2J3-214ENST00000508910 NBPF1Q3BBV0 1214 aa15.41■□□□□ 0.06
POLR2J3-214ENST00000508910 CFAP70Q5T0N1 1121 aa15.41■□□□□ 0.06
POLR2J3-214ENST00000508910 TXNDC2Q86VQ3 553 aa15.41■□□□□ 0.06
POLR2J3-214ENST00000508910 ASXL1Q8IXJ9 1541 aa15.4■□□□□ 0.06
POLR2J3-214ENST00000508910 LTKP29376 864 aa15.4■□□□□ 0.06
POLR2J3-214ENST00000508910 EIF4G2P78344 907 aaKnown RBP eCLIP15.4■□□□□ 0.06
POLR2J3-214ENST00000508910 DIP2AQ14689 1571 aa15.4■□□□□ 0.06
POLR2J3-214ENST00000508910 LMTK3Q96Q04 1460 aa15.4■□□□□ 0.06
POLR2J3-214ENST00000508910 ANKLE2Q86XL3 938 aa15.38■□□□□ 0.05
POLR2J3-214ENST00000508910 POTEDQ86YR6 584 aa15.38■□□□□ 0.05
POLR2J3-214ENST00000508910 ADAMTS13Q76LX8 1427 aa15.37■□□□□ 0.05
POLR2J3-214ENST00000508910 EIF3AQ14152 1382 aaKnown RBP15.36■□□□□ 0.05
POLR2J3-214ENST00000508910 MED14O60244 1454 aa15.36■□□□□ 0.05
POLR2J3-214ENST00000508910 HSPA5P11021 654 aaKnown RBP15.36■□□□□ 0.05
POLR2J3-214ENST00000508910 BCANQ96GW7 911 aa15.35■□□□□ 0.05
POLR2J3-214ENST00000508910 ZNF316A6NFI3 1004 aaPredicted RBP15.34■□□□□ 0.05
POLR2J3-214ENST00000508910 NPHP4O75161 1426 aaPredicted RBP15.34■□□□□ 0.05
POLR2J3-214ENST00000508910 KNDC1Q76NI1 1749 aa15.33■□□□□ 0.04
POLR2J3-214ENST00000508910 ARHGEF28Q8N1W1 1705 aaKnown RBP15.33■□□□□ 0.04
POLR2J3-214ENST00000508910 YTHDC2Q9H6S0 1430 aaKnown RBP15.33■□□□□ 0.04
POLR2J3-214ENST00000508910 TMEM132EQ6IEE7 984 aa15.32■□□□□ 0.04
POLR2J3-214ENST00000508910 METP08581 1390 aa15.31■□□□□ 0.04
POLR2J3-214ENST00000508910 LRPPRCP42704 1394 aaKnown RBP15.31■□□□□ 0.04
POLR2J3-214ENST00000508910 DLC1Q96QB1 1528 aa15.31■□□□□ 0.04
POLR2J3-214ENST00000508910 TBX22Q9Y458 520 aa15.3■□□□□ 0.04
POLR2J3-214ENST00000508910 CPS1P31327 1500 aa15.29■□□□□ 0.04
POLR2J3-214ENST00000508910 TECPR2O15040 1411 aa15.29■□□□□ 0.04
POLR2J3-214ENST00000508910 PIK3R4Q99570 1358 aa15.29■□□□□ 0.04
POLR2J3-214ENST00000508910 ST20-MTHFSA0A0A6YYL1 179 aa15.29■□□□□ 0.04
POLR2J3-214ENST00000508910 HIRIP3Q9BW71 556 aaPredicted RBP15.29■□□□□ 0.04
POLR2J3-214ENST00000508910 QRICH2Q9H0J4 1663 aa15.28■□□□□ 0.04
POLR2J3-214ENST00000508910 ABCC11Q96J66 1382 aa15.28■□□□□ 0.04
POLR2J3-214ENST00000508910 NCKAP5LQ9HCH0 1330 aa15.28■□□□□ 0.04
POLR2J3-214ENST00000508910 HSPA2P54652 639 aa15.28■□□□□ 0.04
POLR2J3-214ENST00000508910 SLC26A8Q96RN1 970 aa15.28■□□□□ 0.04
POLR2J3-214ENST00000508910 XRN1Q8IZH2 1706 aaKnown RBP15.27■□□□□ 0.04
POLR2J3-214ENST00000508910 TRAK1Q9UPV9 953 aa15.27■□□□□ 0.04
POLR2J3-214ENST00000508910 STRCQ7RTU9 1775 aa15.26■□□□□ 0.03
POLR2J3-214ENST00000508910 SBNO2Q9Y2G9 1366 aa15.26■□□□□ 0.03
POLR2J3-214ENST00000508910 CENPJQ9HC77 1338 aaPredicted RBP15.26■□□□□ 0.03
POLR2J3-214ENST00000508910 STK26Q9P289 416 aa15.26■□□□□ 0.03
POLR2J3-214ENST00000508910 PTCH1Q13635 1447 aa15.25■□□□□ 0.03
POLR2J3-214ENST00000508910 FAM135BQ49AJ0 1406 aa15.25■□□□□ 0.03
POLR2J3-214ENST00000508910 PTPRUQ92729 1446 aa15.25■□□□□ 0.03
POLR2J3-214ENST00000508910 TESK2Q96S53 571 aa15.24■□□□□ 0.03
POLR2J3-214ENST00000508910 CHD2O14647 1828 aaKnown RBP15.24■□□□□ 0.03
POLR2J3-214ENST00000508910 NWD1Q149M9 1564 aa15.24■□□□□ 0.03
POLR2J3-214ENST00000508910 SLC24A1O60721 1099 aa15.22■□□□□ 0.03
POLR2J3-214ENST00000508910 SIRT1Q96EB6 747 aa15.22■□□□□ 0.03
POLR2J3-214ENST00000508910 PRAM1Q96QH2 718 aa15.21■□□□□ 0.03
POLR2J3-214ENST00000508910 CCDC7Q96M83 1385 aa15.21■□□□□ 0.02
POLR2J3-214ENST00000508910 TMF1P82094 1093 aa15.2■□□□□ 0.02
POLR2J3-214ENST00000508910 POGKQ9P215 609 aa15.2■□□□□ 0.02
POLR2J3-214ENST00000508910 AMOTL2Q9Y2J4 779 aa15.2■□□□□ 0.02
POLR2J3-214ENST00000508910 ROBO2Q9HCK4 1378 aa15.2■□□□□ 0.02
POLR2J3-214ENST00000508910 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
POLR2J3-214ENST00000508910 KIF7Q2M1P5 1343 aa15.19■□□□□ 0.02
POLR2J3-214ENST00000508910 NKTRP30414 1462 aaKnown RBP15.19■□□□□ 0.02
POLR2J3-214ENST00000508910 WASHC2AQ641Q2 1341 aa15.18■□□□□ 0.02
POLR2J3-214ENST00000508910 PLEKHH1Q9ULM0 1364 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms