RNA–Protein interactions for RNA: ENST00000508854.1

SH3D21-206, Transcript of SH3 domain containing 21, humanhuman

TSL 5

Gene SH3D21, Length 1,134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-206ENST00000508854 PPP1R15AO75807 674 aaPredicted RBP15.5■□□□□ 0.07
SH3D21-206ENST00000508854 RGS17Q9UGC6 210 aaPredicted RBP15.5■□□□□ 0.07
SH3D21-206ENST00000508854 ANKRD50Q9ULJ7 1429 aa15.5■□□□□ 0.07
SH3D21-206ENST00000508854 FAM50AQ14320 339 aaKnown RBP15.49■□□□□ 0.07
SH3D21-206ENST00000508854 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.49■□□□□ 0.07
SH3D21-206ENST00000508854 SLAIN2Q9P270 581 aa15.49■□□□□ 0.07
SH3D21-206ENST00000508854 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
SH3D21-206ENST00000508854 ROBO1Q9Y6N7 1651 aa15.48■□□□□ 0.07
SH3D21-206ENST00000508854 PLEKHG1Q9ULL1 1385 aa15.48■□□□□ 0.07
SH3D21-206ENST00000508854 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
SH3D21-206ENST00000508854 TBX22Q9Y458 520 aa15.46■□□□□ 0.07
SH3D21-206ENST00000508854 RBM33Q96EV2 1170 aaKnown RBP15.45■□□□□ 0.06
SH3D21-206ENST00000508854 ZFYVE9O95405 1425 aa15.44■□□□□ 0.06
SH3D21-206ENST00000508854 RIMS2Q9UQ26 1411 aa15.44■□□□□ 0.06
SH3D21-206ENST00000508854 JCADQ9P266 1359 aa15.44■□□□□ 0.06
SH3D21-206ENST00000508854 CHD2O14647 1828 aaKnown RBP15.43■□□□□ 0.06
SH3D21-206ENST00000508854 C14orf37Q86TY3 774 aa15.43■□□□□ 0.06
SH3D21-206ENST00000508854 CHGAP10645 457 aaKnown RBP15.42■□□□□ 0.06
SH3D21-206ENST00000508854 POTEAQ6S8J7 498 aa15.42■□□□□ 0.06
SH3D21-206ENST00000508854 GCC2Q8IWJ2 1684 aa15.41■□□□□ 0.06
SH3D21-206ENST00000508854 PIK3R4Q99570 1358 aa15.41■□□□□ 0.06
SH3D21-206ENST00000508854 PHLPP1O60346 1717 aa15.41■□□□□ 0.06
SH3D21-206ENST00000508854 CADPS2Q86UW7 1296 aa15.41■□□□□ 0.06
SH3D21-206ENST00000508854 TMEM131LA2VDJ0 1609 aa15.41■□□□□ 0.06
SH3D21-206ENST00000508854 ATF3P18847 181 aa15.4■□□□□ 0.06
SH3D21-206ENST00000508854 C19orf44Q9H6X5 657 aa15.4■□□□□ 0.06
SH3D21-206ENST00000508854 MYO5BQ9ULV0 1848 aa15.39■□□□□ 0.05
SH3D21-206ENST00000508854 DIP2AQ14689 1571 aa15.39■□□□□ 0.05
SH3D21-206ENST00000508854 SPATA31A6Q5VVP1 1343 aa15.39■□□□□ 0.05
SH3D21-206ENST00000508854 ROCK1Q13464 1354 aa15.38■□□□□ 0.05
SH3D21-206ENST00000508854 UNC13BO14795 1591 aa15.38■□□□□ 0.05
SH3D21-206ENST00000508854 MEX3CQ5U5Q3 659 aaKnown RBP15.36■□□□□ 0.05
SH3D21-206ENST00000508854 ZNF772Q68DY9 489 aaPredicted RBP15.35■□□□□ 0.05
SH3D21-206ENST00000508854 NUP155O75694 1391 aa15.34■□□□□ 0.05
SH3D21-206ENST00000508854 ADAMTS13Q76LX8 1427 aa15.34■□□□□ 0.05
SH3D21-206ENST00000508854 TRPM2O94759 1503 aa15.33■□□□□ 0.05
SH3D21-206ENST00000508854 IQGAP3Q86VI3 1631 aa15.33■□□□□ 0.04
SH3D21-206ENST00000508854 E9PCH4 1651 aa15.33■□□□□ 0.04
SH3D21-206ENST00000508854 NUTM2DQ5VT03 806 aaPredicted RBP15.33■□□□□ 0.04
SH3D21-206ENST00000508854 AMOTL2Q9Y2J4 779 aa15.33■□□□□ 0.04
SH3D21-206ENST00000508854 COL16A1Q07092 1604 aaPredicted RBP15.32■□□□□ 0.04
SH3D21-206ENST00000508854 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.31■□□□□ 0.04
SH3D21-206ENST00000508854 AHDC1Q5TGY3 1603 aaPredicted RBP15.31■□□□□ 0.04
SH3D21-206ENST00000508854 DCCP43146 1447 aa15.3■□□□□ 0.04
SH3D21-206ENST00000508854 SHPRHQ149N8 1683 aa15.28■□□□□ 0.04
SH3D21-206ENST00000508854 ZNF326Q5BKZ1 582 aaKnown RBP15.27■□□□□ 0.04
SH3D21-206ENST00000508854 BRINP3Q76B58 766 aa15.27■□□□□ 0.04
SH3D21-206ENST00000508854 RXRBP28702 533 aa15.26■□□□□ 0.03
SH3D21-206ENST00000508854 ITGAEP38570 1179 aa15.26■□□□□ 0.03
SH3D21-206ENST00000508854 LRRC59Q96AG4 307 aaKnown RBP15.25■□□□□ 0.03
SH3D21-206ENST00000508854 LRP6O75581 1613 aa15.25■□□□□ 0.03
SH3D21-206ENST00000508854 SETBP1Q9Y6X0 1596 aa15.24■□□□□ 0.03
SH3D21-206ENST00000508854 PTPRUQ92729 1446 aa15.24■□□□□ 0.03
SH3D21-206ENST00000508854 NUTM2BA6NNL0 878 aaPredicted RBP15.23■□□□□ 0.03
SH3D21-206ENST00000508854 NUTM2EB1AL46 878 aaPredicted RBP15.23■□□□□ 0.03
SH3D21-206ENST00000508854 NUTM2AQ8IVF1 878 aaPredicted RBP15.23■□□□□ 0.03
SH3D21-206ENST00000508854 TRIM52Q96A61 297 aa15.23■□□□□ 0.03
SH3D21-206ENST00000508854 SETD1AO15047 1707 aaKnown RBP15.23■□□□□ 0.03
SH3D21-206ENST00000508854 SETD5Q9C0A6 1442 aa15.22■□□□□ 0.03
SH3D21-206ENST00000508854 SPHKAPQ2M3C7 1700 aa15.22■□□□□ 0.03
SH3D21-206ENST00000508854 ASXL1Q8IXJ9 1541 aa15.22■□□□□ 0.03
SH3D21-206ENST00000508854 XRN1Q8IZH2 1706 aaKnown RBP15.21■□□□□ 0.03
SH3D21-206ENST00000508854 UPF1Q92900 1129 aaKnown RBP eCLIP15.21■□□□□ 0.03
SH3D21-206ENST00000508854 CDK12Q9NYV4 1490 aaPredicted RBP15.2■□□□□ 0.02
SH3D21-206ENST00000508854 MST1RQ04912 1400 aa15.19■□□□□ 0.02
SH3D21-206ENST00000508854 NRXN3Q9Y4C0 1643 aa15.19■□□□□ 0.02
SH3D21-206ENST00000508854 METP08581 1390 aa15.19■□□□□ 0.02
SH3D21-206ENST00000508854 VGFO15240 615 aaPredicted RBP15.18■□□□□ 0.02
SH3D21-206ENST00000508854 AFF2P51816 1311 aa15.17■□□□□ 0.02
SH3D21-206ENST00000508854 ADGRL3Q9HAR2 1447 aa15.17■□□□□ 0.02
SH3D21-206ENST00000508854 NHSL1Q5SYE7 1610 aa15.17■□□□□ 0.02
SH3D21-206ENST00000508854 RBM6P78332 1123 aaKnown RBP15.15■□□□□ 0.02
SH3D21-206ENST00000508854 C8orf37Q96NL8 207 aa15.15■□□□□ 0.02
SH3D21-206ENST00000508854 KIF1BO60333 1816 aa15.15■□□□□ 0.02
SH3D21-206ENST00000508854 NEXMIFQ5QGS0 1516 aa15.14■□□□□ 0.01
SH3D21-206ENST00000508854 NGLY1Q96IV0 654 aa15.14■□□□□ 0.01
SH3D21-206ENST00000508854 QTRT2Q9H974 415 aaKnown RBP15.14■□□□□ 0.01
SH3D21-206ENST00000508854 RPGRIP1LQ68CZ1 1315 aa15.14■□□□□ 0.01
SH3D21-206ENST00000508854 PNPLA6Q8IY17 1366 aa15.12■□□□□ 0.01
SH3D21-206ENST00000508854 PTCH1Q13635 1447 aa15.12■□□□□ 0.01
SH3D21-206ENST00000508854 CLTCL1P53675 1640 aa15.12■□□□□ 0.01
SH3D21-206ENST00000508854 C1orf167Q5SNV9 1468 aa15.11■□□□□ 0.01
SH3D21-206ENST00000508854 NALCNQ8IZF0 1738 aa15.1■□□□□ 0.01
SH3D21-206ENST00000508854 PPARGC1BQ86YN6 1023 aaKnown RBP15.1■□□□□ 0.01
SH3D21-206ENST00000508854 FOXD1Q16676 465 aa15.09■□□□□ 0.01
SH3D21-206ENST00000508854 DDX17Q92841 729 aaKnown RBP15.09■□□□□ 0.01
SH3D21-206ENST00000508854 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
SH3D21-206ENST00000508854 NAIPQ13075 1403 aa15.09■□□□□ 0.01
SH3D21-206ENST00000508854 ADAMTS2O95450 1211 aa15.08■□□□□ 0
SH3D21-206ENST00000508854 SOS2Q07890 1332 aaPredicted RBP15.08■□□□□ 0
SH3D21-206ENST00000508854 PRAG1Q86YV5 1406 aa15.08■□□□□ 0
SH3D21-206ENST00000508854 LAMC1P11047 1609 aa15.07■□□□□ 0
SH3D21-206ENST00000508854 TRPC5Q9UL62 973 aaPredicted RBP15.07■□□□□ 0
SH3D21-206ENST00000508854 RRBP1Q9P2E9 1410 aaKnown RBP15.07■□□□□ 0
SH3D21-206ENST00000508854 ORAI2Q96SN7 254 aa15.06■□□□□ 0
SH3D21-206ENST00000508854 SLC4A1APQ9BWU0 796 aaKnown RBP15.06■□□□□ 0
SH3D21-206ENST00000508854 USP21Q9UK80 565 aa15.06■□□□□ 0
SH3D21-206ENST00000508854 ROBO2Q9HCK4 1378 aa15.06■□□□□ 0
SH3D21-206ENST00000508854 RGS12O14924 1447 aa15.06■□□□□ 0
SH3D21-206ENST00000508854 ATAD2Q6PL18 1390 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms