RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 PRAG1Q86YV5 1406 aa22.76■■□□□ 1.23
NFKB1-207ENST00000508584 STAC3Q96MF2 364 aa22.76■■□□□ 1.23
NFKB1-207ENST00000508584 CHGAP10645 457 aaKnown RBP22.75■■□□□ 1.23
NFKB1-207ENST00000508584 SPATA31D1Q6ZQQ2 1576 aa22.75■■□□□ 1.23
NFKB1-207ENST00000508584 KIF1BO60333 1816 aa22.75■■□□□ 1.23
NFKB1-207ENST00000508584 RALGAPBQ86X10 1494 aa22.74■■□□□ 1.23
NFKB1-207ENST00000508584 IDI1Q13907 227 aa22.73■■□□□ 1.23
NFKB1-207ENST00000508584 CFAP65Q6ZU64 1925 aaKnown RBP22.72■■□□□ 1.23
NFKB1-207ENST00000508584 THEMISQ8N1K5 641 aaPredicted RBP22.71■■□□□ 1.23
NFKB1-207ENST00000508584 NLRP1Q9C000 1473 aa22.71■■□□□ 1.23
NFKB1-207ENST00000508584 ANKLE2Q86XL3 938 aa22.7■■□□□ 1.22
NFKB1-207ENST00000508584 RPGRIP1LQ68CZ1 1315 aa22.69■■□□□ 1.22
NFKB1-207ENST00000508584 UBAP1LF5GYI3 381 aa22.69■■□□□ 1.22
NFKB1-207ENST00000508584 MYOM2P54296 1465 aa22.68■■□□□ 1.22
NFKB1-207ENST00000508584 DISP3Q9P2K9 1392 aa22.68■■□□□ 1.22
NFKB1-207ENST00000508584 EIF4G2P78344 907 aaKnown RBP eCLIP22.68■■□□□ 1.22
NFKB1-207ENST00000508584 HSPA5P11021 654 aaKnown RBP22.65■■□□□ 1.22
NFKB1-207ENST00000508584 ROCK2O75116 1388 aaKnown RBP22.64■■□□□ 1.22
NFKB1-207ENST00000508584 TRPM1Q7Z4N2 1603 aa22.64■■□□□ 1.22
NFKB1-207ENST00000508584 HIRIP3Q9BW71 556 aaPredicted RBP22.63■■□□□ 1.21
NFKB1-207ENST00000508584 CARD11Q9BXL7 1154 aa22.63■■□□□ 1.21
NFKB1-207ENST00000508584 TMEM131LA2VDJ0 1609 aa22.63■■□□□ 1.21
NFKB1-207ENST00000508584 POLR1AO95602 1720 aaPredicted RBP22.62■■□□□ 1.21
NFKB1-207ENST00000508584 IFT172Q9UG01 1749 aa22.62■■□□□ 1.21
NFKB1-207ENST00000508584 NRXN1Q9ULB1 1477 aa22.61■■□□□ 1.21
NFKB1-207ENST00000508584 GPRASP1Q5JY77 1395 aa22.61■■□□□ 1.21
NFKB1-207ENST00000508584 ADGRF5Q8IZF2 1346 aa22.6■■□□□ 1.21
NFKB1-207ENST00000508584 STAG3Q9UJ98 1225 aa22.6■■□□□ 1.21
NFKB1-207ENST00000508584 USP47Q96K76 1375 aa22.6■■□□□ 1.21
NFKB1-207ENST00000508584 NPHP4O75161 1426 aaPredicted RBP22.59■■□□□ 1.21
NFKB1-207ENST00000508584 CPS1P31327 1500 aa22.59■■□□□ 1.21
NFKB1-207ENST00000508584 NEXMIFQ5QGS0 1516 aa22.59■■□□□ 1.21
NFKB1-207ENST00000508584 PPLO60437 1756 aa22.58■■□□□ 1.21
NFKB1-207ENST00000508584 NBPF1Q3BBV0 1214 aa22.58■■□□□ 1.21
NFKB1-207ENST00000508584 MED14O60244 1454 aa22.58■■□□□ 1.2
NFKB1-207ENST00000508584 VGFO15240 615 aaPredicted RBP22.56■■□□□ 1.2
NFKB1-207ENST00000508584 DIEXFQ68CQ4 756 aaKnown RBP22.56■■□□□ 1.2
NFKB1-207ENST00000508584 LAMC1P11047 1609 aa22.56■■□□□ 1.2
NFKB1-207ENST00000508584 ZFYVE9O95405 1425 aa22.55■■□□□ 1.2
NFKB1-207ENST00000508584 TOM1O60784 492 aa22.54■■□□□ 1.2
NFKB1-207ENST00000508584 PIK3C2GO75747 1445 aa22.53■■□□□ 1.2
NFKB1-207ENST00000508584 KIAA1210Q9ULL0 1709 aa22.53■■□□□ 1.2
NFKB1-207ENST00000508584 ILDR2Q71H61 639 aa22.52■■□□□ 1.2
NFKB1-207ENST00000508584 SCAF1Q9H7N4 1312 aaKnown RBP22.52■■□□□ 1.2
NFKB1-207ENST00000508584 CFAP70Q5T0N1 1121 aa22.51■■□□□ 1.19
NFKB1-207ENST00000508584 NUTM2DQ5VT03 806 aaPredicted RBP22.5■■□□□ 1.19
NFKB1-207ENST00000508584 MYO5BQ9ULV0 1848 aa22.5■■□□□ 1.19
NFKB1-207ENST00000508584 RIMS2Q9UQ26 1411 aa22.49■■□□□ 1.19
NFKB1-207ENST00000508584 PIP4K2BP78356 416 aa22.49■■□□□ 1.19
NFKB1-207ENST00000508584 IQGAP1P46940 1657 aa22.49■■□□□ 1.19
NFKB1-207ENST00000508584 C14orf93Q9H972 538 aaKnown RBP22.48■■□□□ 1.19
NFKB1-207ENST00000508584 KDM5AP29375 1690 aaKnown RBP22.48■■□□□ 1.19
NFKB1-207ENST00000508584 ST20-MTHFSA0A0A6YYL1 179 aa22.45■■□□□ 1.18
NFKB1-207ENST00000508584 TXNDC2Q86VQ3 553 aa22.45■■□□□ 1.18
NFKB1-207ENST00000508584 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.45■■□□□ 1.18
NFKB1-207ENST00000508584 SCAF11Q99590 1463 aaKnown RBP22.45■■□□□ 1.18
NFKB1-207ENST00000508584 UBR1Q8IWV7 1749 aa22.45■■□□□ 1.18
NFKB1-207ENST00000508584 EID1Q9Y6B2 187 aa22.44■■□□□ 1.18
NFKB1-207ENST00000508584 SETBP1Q9Y6X0 1596 aa22.44■■□□□ 1.18
NFKB1-207ENST00000508584 HDGFP51858 240 aaKnown RBP22.43■■□□□ 1.18
NFKB1-207ENST00000508584 TMEM2Q9UHN6 1383 aa22.42■■□□□ 1.18
NFKB1-207ENST00000508584 WASHC2AQ641Q2 1341 aa22.42■■□□□ 1.18
NFKB1-207ENST00000508584 SOCS7O14512 581 aa22.42■■□□□ 1.18
NFKB1-207ENST00000508584 HSPA1LP34931 641 aa22.42■■□□□ 1.18
NFKB1-207ENST00000508584 SLIT1O75093 1534 aa22.41■■□□□ 1.18
NFKB1-207ENST00000508584 ARHGAP23Q9P227 1491 aa22.41■■□□□ 1.18
NFKB1-207ENST00000508584 CCDC7Q96M83 1385 aa22.41■■□□□ 1.18
NFKB1-207ENST00000508584 C11orf95C9JLR9 678 aaPredicted RBP22.41■■□□□ 1.18
NFKB1-207ENST00000508584 LTKP29376 864 aa22.41■■□□□ 1.18
NFKB1-207ENST00000508584 DDX10Q13206 875 aaKnown RBP22.4■■□□□ 1.18
NFKB1-207ENST00000508584 EIF3AQ14152 1382 aaKnown RBP22.39■■□□□ 1.18
NFKB1-207ENST00000508584 ADGRB1O14514 1584 aa22.39■■□□□ 1.18
NFKB1-207ENST00000508584 LRRC7Q96NW7 1537 aa22.38■■□□□ 1.17
NFKB1-207ENST00000508584 KIF7Q2M1P5 1343 aa22.37■■□□□ 1.17
NFKB1-207ENST00000508584 TMEM132EQ6IEE7 984 aa22.35■■□□□ 1.17
NFKB1-207ENST00000508584 TESK2Q96S53 571 aa22.34■■□□□ 1.17
NFKB1-207ENST00000508584 ALKQ9UM73 1620 aa22.34■■□□□ 1.17
NFKB1-207ENST00000508584 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
NFKB1-207ENST00000508584 STRCP1A6NGW2 1772 aa22.33■■□□□ 1.16
NFKB1-207ENST00000508584 ASXL1Q8IXJ9 1541 aa22.31■■□□□ 1.16
NFKB1-207ENST00000508584 PLEKHG1Q9ULL1 1385 aa22.29■■□□□ 1.16
NFKB1-207ENST00000508584 TMF1P82094 1093 aa22.29■■□□□ 1.16
NFKB1-207ENST00000508584 TRAK1Q9UPV9 953 aa22.29■■□□□ 1.16
NFKB1-207ENST00000508584 BCANQ96GW7 911 aa22.27■■□□□ 1.16
NFKB1-207ENST00000508584 POLR3GLQ9BT43 218 aa22.27■■□□□ 1.16
NFKB1-207ENST00000508584 NRXN3Q9Y4C0 1643 aa22.27■■□□□ 1.16
NFKB1-207ENST00000508584 CENPJQ9HC77 1338 aaPredicted RBP22.27■■□□□ 1.16
NFKB1-207ENST00000508584 YTHDC2Q9H6S0 1430 aaKnown RBP22.26■■□□□ 1.15
NFKB1-207ENST00000508584 SLC24A1O60721 1099 aa22.26■■□□□ 1.15
NFKB1-207ENST00000508584 MED1Q15648 1581 aaPredicted RBP22.25■■□□□ 1.15
NFKB1-207ENST00000508584 MIER1Q8N108 512 aa22.24■■□□□ 1.15
NFKB1-207ENST00000508584 SBNO2Q9Y2G9 1366 aa22.24■■□□□ 1.15
NFKB1-207ENST00000508584 KCNA6P17658 529 aa22.23■■□□□ 1.15
NFKB1-207ENST00000508584 SLC26A8Q96RN1 970 aa22.23■■□□□ 1.15
NFKB1-207ENST00000508584 STK26Q9P289 416 aa22.23■■□□□ 1.15
NFKB1-207ENST00000508584 LRPPRCP42704 1394 aaKnown RBP22.23■■□□□ 1.15
NFKB1-207ENST00000508584 SETD1AO15047 1707 aaKnown RBP22.23■■□□□ 1.15
NFKB1-207ENST00000508584 ADAMTS13Q76LX8 1427 aa22.22■■□□□ 1.15
NFKB1-207ENST00000508584 CDCA8Q53HL2 280 aa22.21■■□□□ 1.15
NFKB1-207ENST00000508584 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms