RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 TOM1O60784 492 aa21.71■■□□□ 1.07
RAB28-205ENST00000508274 NAIPQ13075 1403 aa21.71■■□□□ 1.07
RAB28-205ENST00000508274 SLC26A8Q96RN1 970 aa21.7■■□□□ 1.06
RAB28-205ENST00000508274 RIMS2Q9UQ26 1411 aa21.69■■□□□ 1.06
RAB28-205ENST00000508274 SPHKAPQ2M3C7 1700 aa21.69■■□□□ 1.06
RAB28-205ENST00000508274 CHGAP10645 457 aaKnown RBP21.69■■□□□ 1.06
RAB28-205ENST00000508274 DISP3Q9P2K9 1392 aa21.65■■□□□ 1.06
RAB28-205ENST00000508274 PLEKHG1Q9ULL1 1385 aa21.64■■□□□ 1.05
RAB28-205ENST00000508274 HSPA1LP34931 641 aa21.64■■□□□ 1.05
RAB28-205ENST00000508274 NWD1Q149M9 1564 aa21.63■■□□□ 1.05
RAB28-205ENST00000508274 NUTM2DQ5VT03 806 aaPredicted RBP21.63■■□□□ 1.05
RAB28-205ENST00000508274 BCANQ96GW7 911 aa21.63■■□□□ 1.05
RAB28-205ENST00000508274 HFM1A2PYH4 1435 aa21.63■■□□□ 1.05
RAB28-205ENST00000508274 PPP1R15AO75807 674 aaPredicted RBP21.62■■□□□ 1.05
RAB28-205ENST00000508274 KCNA6P17658 529 aa21.61■■□□□ 1.05
RAB28-205ENST00000508274 CHD2O14647 1828 aaKnown RBP21.6■■□□□ 1.05
RAB28-205ENST00000508274 TMEM94Q12767 1356 aa21.6■■□□□ 1.05
RAB28-205ENST00000508274 RBM33Q96EV2 1170 aaKnown RBP21.59■■□□□ 1.05
RAB28-205ENST00000508274 CLTCL1P53675 1640 aa21.59■■□□□ 1.05
RAB28-205ENST00000508274 NKTRP30414 1462 aaKnown RBP21.58■■□□□ 1.05
RAB28-205ENST00000508274 HDGFP51858 240 aaKnown RBP21.57■■□□□ 1.04
RAB28-205ENST00000508274 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.57■■□□□ 1.04
RAB28-205ENST00000508274 TRPM2O94759 1503 aa21.56■■□□□ 1.04
RAB28-205ENST00000508274 ADAMTS13Q76LX8 1427 aa21.56■■□□□ 1.04
RAB28-205ENST00000508274 PROSER2Q86WR7 435 aaPredicted RBP21.55■■□□□ 1.04
RAB28-205ENST00000508274 TRIM52Q96A61 297 aa21.54■■□□□ 1.04
RAB28-205ENST00000508274 DIP2AQ14689 1571 aa21.53■■□□□ 1.04
RAB28-205ENST00000508274 ILDR2Q71H61 639 aa21.53■■□□□ 1.04
RAB28-205ENST00000508274 KIF1BO60333 1816 aa21.52■■□□□ 1.04
RAB28-205ENST00000508274 NRXN3Q9Y4C0 1643 aa21.52■■□□□ 1.04
RAB28-205ENST00000508274 TBX22Q9Y458 520 aa21.52■■□□□ 1.04
RAB28-205ENST00000508274 MED1Q15648 1581 aaPredicted RBP21.49■■□□□ 1.03
RAB28-205ENST00000508274 NEXMIFQ5QGS0 1516 aa21.49■■□□□ 1.03
RAB28-205ENST00000508274 ZNF326Q5BKZ1 582 aaKnown RBP21.48■■□□□ 1.03
RAB28-205ENST00000508274 SLC4A1APQ9BWU0 796 aaKnown RBP21.47■■□□□ 1.03
RAB28-205ENST00000508274 SETBP1Q9Y6X0 1596 aa21.47■■□□□ 1.03
RAB28-205ENST00000508274 ROBO1Q9Y6N7 1651 aa21.46■■□□□ 1.03
RAB28-205ENST00000508274 PTPRUQ92729 1446 aa21.45■■□□□ 1.03
RAB28-205ENST00000508274 MSH6P52701 1360 aa21.45■■□□□ 1.02
RAB28-205ENST00000508274 PIK3R4Q99570 1358 aa21.45■■□□□ 1.02
RAB28-205ENST00000508274 FAM135BQ49AJ0 1406 aa21.44■■□□□ 1.02
RAB28-205ENST00000508274 XRN1Q8IZH2 1706 aaKnown RBP21.42■■□□□ 1.02
RAB28-205ENST00000508274 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.4■■□□□ 1.02
RAB28-205ENST00000508274 AMOTL2Q9Y2J4 779 aa21.4■■□□□ 1.02
RAB28-205ENST00000508274 METP08581 1390 aa21.39■■□□□ 1.01
RAB28-205ENST00000508274 NCOA3Q9Y6Q9 1424 aa21.37■■□□□ 1.01
RAB28-205ENST00000508274 PPLO60437 1756 aa21.37■■□□□ 1.01
RAB28-205ENST00000508274 C14orf37Q86TY3 774 aa21.36■■□□□ 1.01
RAB28-205ENST00000508274 SETD1AO15047 1707 aaKnown RBP21.36■■□□□ 1.01
RAB28-205ENST00000508274 SLAIN2Q9P270 581 aa21.36■■□□□ 1.01
RAB28-205ENST00000508274 MPHOSPH9Q99550 1183 aa21.35■■□□□ 1.01
RAB28-205ENST00000508274 PHLPP1O60346 1717 aa21.33■■□□□ 1.01
RAB28-205ENST00000508274 SETD5Q9C0A6 1442 aa21.32■■□□□ 1
RAB28-205ENST00000508274 CCDC144AA2RUR9 1427 aa21.31■■□□□ 1
RAB28-205ENST00000508274 C19orf44Q9H6X5 657 aa21.3■■□□□ 1
RAB28-205ENST00000508274 VGFO15240 615 aaPredicted RBP21.29■■□□□ 1
RAB28-205ENST00000508274 NALCNQ8IZF0 1738 aa21.29■■□□□ 1
RAB28-205ENST00000508274 IFT172Q9UG01 1749 aa21.28■■□□□ 1
RAB28-205ENST00000508274 CADPS2Q86UW7 1296 aa21.28■■□□□ 1
RAB28-205ENST00000508274 RPGRIP1LQ68CZ1 1315 aa21.28■■□□□ 1
RAB28-205ENST00000508274 SOCS7O14512 581 aa21.27■■□□□ 1
RAB28-205ENST00000508274 ATF3P18847 181 aa21.27■■□□□ 1
RAB28-205ENST00000508274 COL16A1Q07092 1604 aaPredicted RBP21.27■■□□□ 1
RAB28-205ENST00000508274 RAB3GAP2Q9H2M9 1393 aa21.27■□□□□ 0.99
RAB28-205ENST00000508274 SPATA31E1Q6ZUB1 1445 aa21.27■□□□□ 0.99
RAB28-205ENST00000508274 DCCP43146 1447 aa21.25■□□□□ 0.99
RAB28-205ENST00000508274 RGL3Q3MIN7 710 aa21.24■□□□□ 0.99
RAB28-205ENST00000508274 ADGRL3Q9HAR2 1447 aa21.23■□□□□ 0.99
RAB28-205ENST00000508274 AHDC1Q5TGY3 1603 aaPredicted RBP21.23■□□□□ 0.99
RAB28-205ENST00000508274 ADGRF5Q8IZF2 1346 aa21.23■□□□□ 0.99
RAB28-205ENST00000508274 MST1RQ04912 1400 aa21.22■□□□□ 0.99
RAB28-205ENST00000508274 PTCH1Q13635 1447 aa21.22■□□□□ 0.99
RAB28-205ENST00000508274 ROBO2Q9HCK4 1378 aa21.21■□□□□ 0.99
RAB28-205ENST00000508274 BRINP3Q76B58 766 aa21.19■□□□□ 0.98
RAB28-205ENST00000508274 ASXL1Q8IXJ9 1541 aa21.19■□□□□ 0.98
RAB28-205ENST00000508274 PRAG1Q86YV5 1406 aa21.19■□□□□ 0.98
RAB28-205ENST00000508274 RGS17Q9UGC6 210 aaPredicted RBP21.19■□□□□ 0.98
RAB28-205ENST00000508274 JCADQ9P266 1359 aa21.18■□□□□ 0.98
RAB28-205ENST00000508274 ACIN1Q9UKV3 1341 aaKnown RBP21.17■□□□□ 0.98
RAB28-205ENST00000508274 ANKRD30BQ9BXX2 1392 aa21.17■□□□□ 0.98
RAB28-205ENST00000508274 NHSL1Q5SYE7 1610 aa21.16■□□□□ 0.98
RAB28-205ENST00000508274 PIK3C2GO75747 1445 aa21.14■□□□□ 0.98
RAB28-205ENST00000508274 SHPRHQ149N8 1683 aa21.14■□□□□ 0.98
RAB28-205ENST00000508274 LRP6O75581 1613 aa21.12■□□□□ 0.97
RAB28-205ENST00000508274 C1orf167Q5SNV9 1468 aa21.11■□□□□ 0.97
RAB28-205ENST00000508274 KNDC1Q76NI1 1749 aa21.11■□□□□ 0.97
RAB28-205ENST00000508274 DDX17Q92841 729 aaKnown RBP21.1■□□□□ 0.97
RAB28-205ENST00000508274 STK26Q9P289 416 aa21.1■□□□□ 0.97
RAB28-205ENST00000508274 TMEM132EQ6IEE7 984 aa21.09■□□□□ 0.97
RAB28-205ENST00000508274 MYOM2P54296 1465 aa21.08■□□□□ 0.97
RAB28-205ENST00000508274 LRPPRCP42704 1394 aaKnown RBP21.08■□□□□ 0.96
RAB28-205ENST00000508274 TECPR2O15040 1411 aa21.08■□□□□ 0.96
RAB28-205ENST00000508274 NRXN1Q9ULB1 1477 aa21.08■□□□□ 0.96
RAB28-205ENST00000508274 POTEAQ6S8J7 498 aa21.06■□□□□ 0.96
RAB28-205ENST00000508274 SPATA31A6Q5VVP1 1343 aa21.06■□□□□ 0.96
RAB28-205ENST00000508274 CDC42BPGQ6DT37 1551 aa21.06■□□□□ 0.96
RAB28-205ENST00000508274 LAMC1P11047 1609 aa21.06■□□□□ 0.96
RAB28-205ENST00000508274 PLEKHH1Q9ULM0 1364 aa21.05■□□□□ 0.96
RAB28-205ENST00000508274 WAPLQ7Z5K2 1190 aa21.05■□□□□ 0.96
RAB28-205ENST00000508274 YTHDC2Q9H6S0 1430 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms