RNA–Protein interactions for RNA: ENST00000507902.5

PTPN13-206, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 4

Gene PTPN13, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-206ENST00000507902 LTKP29376 864 aa20.51■□□□□ 0.87
PTPN13-206ENST00000507902 LTBP4Q8N2S1 1624 aa20.5■□□□□ 0.87
PTPN13-206ENST00000507902 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
PTPN13-206ENST00000507902 CPS1P31327 1500 aa20.49■□□□□ 0.87
PTPN13-206ENST00000507902 CERKQ8TCT0 537 aa20.49■□□□□ 0.87
PTPN13-206ENST00000507902 CCDC144AA2RUR9 1427 aa20.49■□□□□ 0.87
PTPN13-206ENST00000507902 ZNF335Q9H4Z2 1342 aaPredicted RBP20.48■□□□□ 0.87
PTPN13-206ENST00000507902 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
PTPN13-206ENST00000507902 ZNF326Q5BKZ1 582 aaKnown RBP20.45■□□□□ 0.86
PTPN13-206ENST00000507902 BCANQ96GW7 911 aa20.44■□□□□ 0.86
PTPN13-206ENST00000507902 DIP2AQ14689 1571 aa20.43■□□□□ 0.86
PTPN13-206ENST00000507902 FOXD1Q16676 465 aa20.42■□□□□ 0.86
PTPN13-206ENST00000507902 NEXMIFQ5QGS0 1516 aa20.4■□□□□ 0.86
PTPN13-206ENST00000507902 RPGRIP1LQ68CZ1 1315 aa20.4■□□□□ 0.86
PTPN13-206ENST00000507902 FBXO41Q8TF61 875 aa20.4■□□□□ 0.86
PTPN13-206ENST00000507902 TRIM26Q12899 539 aaPredicted RBP20.38■□□□□ 0.85
PTPN13-206ENST00000507902 SETBP1Q9Y6X0 1596 aa20.37■□□□□ 0.85
PTPN13-206ENST00000507902 SLC26A8Q96RN1 970 aa20.36■□□□□ 0.85
PTPN13-206ENST00000507902 NWD1Q149M9 1564 aa20.35■□□□□ 0.85
PTPN13-206ENST00000507902 VGFO15240 615 aaPredicted RBP20.35■□□□□ 0.85
PTPN13-206ENST00000507902 NKTRP30414 1462 aaKnown RBP20.35■□□□□ 0.85
PTPN13-206ENST00000507902 PIK3R4Q99570 1358 aa20.34■□□□□ 0.85
PTPN13-206ENST00000507902 PPLO60437 1756 aa20.34■□□□□ 0.85
PTPN13-206ENST00000507902 TBX22Q9Y458 520 aa20.34■□□□□ 0.85
PTPN13-206ENST00000507902 SPATA31E1Q6ZUB1 1445 aa20.34■□□□□ 0.85
PTPN13-206ENST00000507902 STRCP1A6NGW2 1772 aa20.34■□□□□ 0.85
PTPN13-206ENST00000507902 NUTM2DQ5VT03 806 aaPredicted RBP20.33■□□□□ 0.85
PTPN13-206ENST00000507902 KCNA6P17658 529 aa20.32■□□□□ 0.84
PTPN13-206ENST00000507902 ADAMTS13Q76LX8 1427 aa20.32■□□□□ 0.84
PTPN13-206ENST00000507902 ANKRD30BQ9BXX2 1392 aa20.32■□□□□ 0.84
PTPN13-206ENST00000507902 LRRC7Q96NW7 1537 aa20.3■□□□□ 0.84
PTPN13-206ENST00000507902 NRXN3Q9Y4C0 1643 aa20.3■□□□□ 0.84
PTPN13-206ENST00000507902 CHD2O14647 1828 aaKnown RBP20.3■□□□□ 0.84
PTPN13-206ENST00000507902 ILDR1Q86SU0 546 aaPredicted RBP20.29■□□□□ 0.84
PTPN13-206ENST00000507902 IFT172Q9UG01 1749 aa20.29■□□□□ 0.84
PTPN13-206ENST00000507902 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
PTPN13-206ENST00000507902 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
PTPN13-206ENST00000507902 UBAP1LF5GYI3 381 aa20.23■□□□□ 0.83
PTPN13-206ENST00000507902 TOM1O60784 492 aa20.23■□□□□ 0.83
PTPN13-206ENST00000507902 MYOM2P54296 1465 aa20.23■□□□□ 0.83
PTPN13-206ENST00000507902 PROSER2Q86WR7 435 aaPredicted RBP20.22■□□□□ 0.83
PTPN13-206ENST00000507902 TMEM94Q12767 1356 aa20.21■□□□□ 0.83
PTPN13-206ENST00000507902 NCOA3Q9Y6Q9 1424 aa20.21■□□□□ 0.83
PTPN13-206ENST00000507902 XRN1Q8IZH2 1706 aaKnown RBP20.21■□□□□ 0.83
PTPN13-206ENST00000507902 ALKQ9UM73 1620 aa20.2■□□□□ 0.82
PTPN13-206ENST00000507902 STAC3Q96MF2 364 aa20.2■□□□□ 0.82
PTPN13-206ENST00000507902 XIRP1Q702N8 1843 aaKnown RBP20.2■□□□□ 0.82
PTPN13-206ENST00000507902 LAMC1P11047 1609 aa20.2■□□□□ 0.82
PTPN13-206ENST00000507902 SETD1AO15047 1707 aaKnown RBP20.19■□□□□ 0.82
PTPN13-206ENST00000507902 PIK3C2GO75747 1445 aa20.19■□□□□ 0.82
PTPN13-206ENST00000507902 AMOTL2Q9Y2J4 779 aa20.18■□□□□ 0.82
PTPN13-206ENST00000507902 METP08581 1390 aa20.18■□□□□ 0.82
PTPN13-206ENST00000507902 MSH6P52701 1360 aa20.18■□□□□ 0.82
PTPN13-206ENST00000507902 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
PTPN13-206ENST00000507902 NRXN1Q9ULB1 1477 aa20.16■□□□□ 0.82
PTPN13-206ENST00000507902 PRAG1Q86YV5 1406 aa20.15■□□□□ 0.82
PTPN13-206ENST00000507902 PTPRUQ92729 1446 aa20.15■□□□□ 0.82
PTPN13-206ENST00000507902 PTCH1Q13635 1447 aa20.14■□□□□ 0.81
PTPN13-206ENST00000507902 C14orf37Q86TY3 774 aa20.13■□□□□ 0.81
PTPN13-206ENST00000507902 DHX57Q6P158 1386 aaKnown RBP20.11■□□□□ 0.81
PTPN13-206ENST00000507902 SCAF1Q9H7N4 1312 aaKnown RBP20.11■□□□□ 0.81
PTPN13-206ENST00000507902 DCCP43146 1447 aa20.1■□□□□ 0.81
PTPN13-206ENST00000507902 DCAF11Q8TEB1 546 aa20.09■□□□□ 0.81
PTPN13-206ENST00000507902 KNDC1Q76NI1 1749 aa20.08■□□□□ 0.81
PTPN13-206ENST00000507902 PIP4K2BP78356 416 aa20.08■□□□□ 0.81
PTPN13-206ENST00000507902 C19orf44Q9H6X5 657 aa20.08■□□□□ 0.81
PTPN13-206ENST00000507902 C14orf93Q9H972 538 aaKnown RBP20.07■□□□□ 0.8
PTPN13-206ENST00000507902 TECPR2O15040 1411 aa20.07■□□□□ 0.8
PTPN13-206ENST00000507902 CADPS2Q86UW7 1296 aa20.06■□□□□ 0.8
PTPN13-206ENST00000507902 RBM33Q96EV2 1170 aaKnown RBP20.06■□□□□ 0.8
PTPN13-206ENST00000507902 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
PTPN13-206ENST00000507902 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.05■□□□□ 0.8
PTPN13-206ENST00000507902 ADGRL3Q9HAR2 1447 aa20.05■□□□□ 0.8
PTPN13-206ENST00000507902 ATF3P18847 181 aa20.05■□□□□ 0.8
PTPN13-206ENST00000507902 ASXL1Q8IXJ9 1541 aa20.04■□□□□ 0.8
PTPN13-206ENST00000507902 KDM2AQ9Y2K7 1162 aa20.04■□□□□ 0.8
PTPN13-206ENST00000507902 ABCC11Q96J66 1382 aa20.04■□□□□ 0.8
PTPN13-206ENST00000507902 YTHDC2Q9H6S0 1430 aaKnown RBP20.03■□□□□ 0.8
PTPN13-206ENST00000507902 ROBO2Q9HCK4 1378 aa20.03■□□□□ 0.8
PTPN13-206ENST00000507902 NALCNQ8IZF0 1738 aa20.02■□□□□ 0.8
PTPN13-206ENST00000507902 FAM135BQ49AJ0 1406 aa20.02■□□□□ 0.79
PTPN13-206ENST00000507902 CFAP70Q5T0N1 1121 aa20.01■□□□□ 0.79
PTPN13-206ENST00000507902 KIAA1210Q9ULL0 1709 aa20■□□□□ 0.79
PTPN13-206ENST00000507902 SLAIN2Q9P270 581 aa20■□□□□ 0.79
PTPN13-206ENST00000507902 ROBO1Q9Y6N7 1651 aa20■□□□□ 0.79
PTPN13-206ENST00000507902 TMEM132EQ6IEE7 984 aa19.99■□□□□ 0.79
PTPN13-206ENST00000507902 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
PTPN13-206ENST00000507902 STK26Q9P289 416 aa19.98■□□□□ 0.79
PTPN13-206ENST00000507902 ADGRB1O14514 1584 aa19.98■□□□□ 0.79
PTPN13-206ENST00000507902 DLC1Q96QB1 1528 aa19.97■□□□□ 0.79
PTPN13-206ENST00000507902 NEUROD1Q13562 356 aa19.97■□□□□ 0.79
PTPN13-206ENST00000507902 SIRT1Q96EB6 747 aa19.97■□□□□ 0.79
PTPN13-206ENST00000507902 CDC42BPGQ6DT37 1551 aa19.96■□□□□ 0.79
PTPN13-206ENST00000507902 SIN3AQ96ST3 1273 aa19.95■□□□□ 0.78
PTPN13-206ENST00000507902 HSPA1LP34931 641 aa19.94■□□□□ 0.78
PTPN13-206ENST00000507902 TONSLQ96HA7 1378 aa19.94■□□□□ 0.78
PTPN13-206ENST00000507902 L3MBTL2Q969R5 705 aa19.93■□□□□ 0.78
PTPN13-206ENST00000507902 MST1RQ04912 1400 aa19.93■□□□□ 0.78
PTPN13-206ENST00000507902 CLSPNQ9HAW4 1339 aa19.91■□□□□ 0.78
PTPN13-206ENST00000507902 POGKQ9P215 609 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms