RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-261ENST00000507901 LTBP4Q8N2S1 1624 aa24.3■■□□□ 1.48
DDR1-261ENST00000507901 TXNDC2Q86VQ3 553 aa24.29■■□□□ 1.48
DDR1-261ENST00000507901 NEXMIFQ5QGS0 1516 aa24.27■■□□□ 1.48
DDR1-261ENST00000507901 ANKRD30BQ9BXX2 1392 aa24.26■■□□□ 1.47
DDR1-261ENST00000507901 EID1Q9Y6B2 187 aa24.25■■□□□ 1.47
DDR1-261ENST00000507901 SPATA31E1Q6ZUB1 1445 aa24.25■■□□□ 1.47
DDR1-261ENST00000507901 ZNF335Q9H4Z2 1342 aaPredicted RBP24.24■■□□□ 1.47
DDR1-261ENST00000507901 CCDC144AA2RUR9 1427 aa24.24■■□□□ 1.47
DDR1-261ENST00000507901 PLEKHG1Q9ULL1 1385 aa24.23■■□□□ 1.47
DDR1-261ENST00000507901 CHGAP10645 457 aaKnown RBP24.22■■□□□ 1.47
DDR1-261ENST00000507901 STRCP1A6NGW2 1772 aa24.21■■□□□ 1.47
DDR1-261ENST00000507901 IQSEC2Q5JU85 1478 aa24.21■■□□□ 1.47
DDR1-261ENST00000507901 PPLO60437 1756 aa24.21■■□□□ 1.47
DDR1-261ENST00000507901 IFT172Q9UG01 1749 aa24.2■■□□□ 1.46
DDR1-261ENST00000507901 NRXN3Q9Y4C0 1643 aa24.2■■□□□ 1.46
DDR1-261ENST00000507901 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.19■■□□□ 1.46
DDR1-261ENST00000507901 ADAMTS13Q76LX8 1427 aa24.18■■□□□ 1.46
DDR1-261ENST00000507901 SETBP1Q9Y6X0 1596 aa24.17■■□□□ 1.46
DDR1-261ENST00000507901 HDGFP51858 240 aaKnown RBP24.16■■□□□ 1.46
DDR1-261ENST00000507901 DIP2AQ14689 1571 aa24.15■■□□□ 1.46
DDR1-261ENST00000507901 RPGRIP1LQ68CZ1 1315 aa24.13■■□□□ 1.45
DDR1-261ENST00000507901 CPS1P31327 1500 aa24.13■■□□□ 1.45
DDR1-261ENST00000507901 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
DDR1-261ENST00000507901 NUTM2DQ5VT03 806 aaPredicted RBP24.12■■□□□ 1.45
DDR1-261ENST00000507901 ZNF326Q5BKZ1 582 aaKnown RBP24.11■■□□□ 1.45
DDR1-261ENST00000507901 SETD1AO15047 1707 aaKnown RBP24.1■■□□□ 1.45
DDR1-261ENST00000507901 CHD2O14647 1828 aaKnown RBP24.1■■□□□ 1.45
DDR1-261ENST00000507901 DHX57Q6P158 1386 aaKnown RBP24.09■■□□□ 1.45
DDR1-261ENST00000507901 PPP1R15AO75807 674 aaPredicted RBP24.09■■□□□ 1.45
DDR1-261ENST00000507901 SLC26A8Q96RN1 970 aa24.08■■□□□ 1.45
DDR1-261ENST00000507901 TBX22Q9Y458 520 aa24.08■■□□□ 1.45
DDR1-261ENST00000507901 UBAP1LF5GYI3 381 aa24.04■■□□□ 1.44
DDR1-261ENST00000507901 XIRP1Q702N8 1843 aaKnown RBP24.04■■□□□ 1.44
DDR1-261ENST00000507901 NRXN1Q9ULB1 1477 aa24.04■■□□□ 1.44
DDR1-261ENST00000507901 LRRC7Q96NW7 1537 aa24.04■■□□□ 1.44
DDR1-261ENST00000507901 PIK3R4Q99570 1358 aa24.03■■□□□ 1.44
DDR1-261ENST00000507901 MYOM2P54296 1465 aa24.03■■□□□ 1.44
DDR1-261ENST00000507901 VGFO15240 615 aaPredicted RBP24.03■■□□□ 1.44
DDR1-261ENST00000507901 XRN1Q8IZH2 1706 aaKnown RBP24.01■■□□□ 1.43
DDR1-261ENST00000507901 NKTRP30414 1462 aaKnown RBP24.01■■□□□ 1.43
DDR1-261ENST00000507901 KCNA6P17658 529 aa24.01■■□□□ 1.43
DDR1-261ENST00000507901 RGL3Q3MIN7 710 aa24.01■■□□□ 1.43
DDR1-261ENST00000507901 ALKQ9UM73 1620 aa24.01■■□□□ 1.43
DDR1-261ENST00000507901 PTPRUQ92729 1446 aa24.01■■□□□ 1.43
DDR1-261ENST00000507901 ADGRF5Q8IZF2 1346 aa24■■□□□ 1.43
DDR1-261ENST00000507901 PIK3C2GO75747 1445 aa24■■□□□ 1.43
DDR1-261ENST00000507901 SENP3Q9H4L4 574 aaPredicted RBP23.98■■□□□ 1.43
DDR1-261ENST00000507901 METP08581 1390 aa23.98■■□□□ 1.43
DDR1-261ENST00000507901 BCANQ96GW7 911 aa23.96■■□□□ 1.43
DDR1-261ENST00000507901 PRAG1Q86YV5 1406 aa23.95■■□□□ 1.42
DDR1-261ENST00000507901 TOM1O60784 492 aa23.94■■□□□ 1.42
DDR1-261ENST00000507901 ASXL1Q8IXJ9 1541 aa23.94■■□□□ 1.42
DDR1-261ENST00000507901 PCGF6Q9BYE7 350 aa23.93■■□□□ 1.42
DDR1-261ENST00000507901 LAMC1P11047 1609 aa23.91■■□□□ 1.42
DDR1-261ENST00000507901 STAC3Q96MF2 364 aa23.88■■□□□ 1.41
DDR1-261ENST00000507901 TMEM94Q12767 1356 aa23.88■■□□□ 1.41
DDR1-261ENST00000507901 AMOTL2Q9Y2J4 779 aa23.87■■□□□ 1.41
DDR1-261ENST00000507901 NCOA3Q9Y6Q9 1424 aa23.86■■□□□ 1.41
DDR1-261ENST00000507901 SIN3AQ96ST3 1273 aa23.86■■□□□ 1.41
DDR1-261ENST00000507901 KNDC1Q76NI1 1749 aa23.85■■□□□ 1.41
DDR1-261ENST00000507901 C14orf93Q9H972 538 aaKnown RBP23.85■■□□□ 1.41
DDR1-261ENST00000507901 PTCH1Q13635 1447 aa23.84■■□□□ 1.41
DDR1-261ENST00000507901 PIP4K2BP78356 416 aa23.84■■□□□ 1.41
DDR1-261ENST00000507901 DCAF11Q8TEB1 546 aa23.84■■□□□ 1.41
DDR1-261ENST00000507901 TECPR2O15040 1411 aa23.84■■□□□ 1.41
DDR1-261ENST00000507901 SCAF1Q9H7N4 1312 aaKnown RBP23.84■■□□□ 1.41
DDR1-261ENST00000507901 ADGRB1O14514 1584 aa23.83■■□□□ 1.41
DDR1-261ENST00000507901 PROSER2Q86WR7 435 aaPredicted RBP23.83■■□□□ 1.41
DDR1-261ENST00000507901 KIAA1210Q9ULL0 1709 aa23.8■■□□□ 1.4
DDR1-261ENST00000507901 LRPPRCP42704 1394 aaKnown RBP23.79■■□□□ 1.4
DDR1-261ENST00000507901 ROBO2Q9HCK4 1378 aa23.79■■□□□ 1.4
DDR1-261ENST00000507901 CFAP70Q5T0N1 1121 aa23.79■■□□□ 1.4
DDR1-261ENST00000507901 RBM33Q96EV2 1170 aaKnown RBP23.79■■□□□ 1.4
DDR1-261ENST00000507901 ABCC11Q96J66 1382 aa23.78■■□□□ 1.4
DDR1-261ENST00000507901 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.77■■□□□ 1.4
DDR1-261ENST00000507901 L3MBTL2Q969R5 705 aa23.77■■□□□ 1.4
DDR1-261ENST00000507901 KDM2AQ9Y2K7 1162 aa23.77■■□□□ 1.4
DDR1-261ENST00000507901 YTHDC2Q9H6S0 1430 aaKnown RBP23.76■■□□□ 1.39
DDR1-261ENST00000507901 NALCNQ8IZF0 1738 aa23.76■■□□□ 1.39
DDR1-261ENST00000507901 HSPA1LP34931 641 aa23.74■■□□□ 1.39
DDR1-261ENST00000507901 TMEM132EQ6IEE7 984 aa23.74■■□□□ 1.39
DDR1-261ENST00000507901 DLC1Q96QB1 1528 aa23.73■■□□□ 1.39
DDR1-261ENST00000507901 NEUROD1Q13562 356 aa23.72■■□□□ 1.39
DDR1-261ENST00000507901 DCCP43146 1447 aa23.72■■□□□ 1.39
DDR1-261ENST00000507901 ADGRL3Q9HAR2 1447 aa23.72■■□□□ 1.39
DDR1-261ENST00000507901 MSH6P52701 1360 aa23.71■■□□□ 1.39
DDR1-261ENST00000507901 DISP3Q9P2K9 1392 aa23.71■■□□□ 1.39
DDR1-261ENST00000507901 CLSPNQ9HAW4 1339 aa23.7■■□□□ 1.38
DDR1-261ENST00000507901 FAM135BQ49AJ0 1406 aa23.69■■□□□ 1.38
DDR1-261ENST00000507901 SIRT1Q96EB6 747 aa23.69■■□□□ 1.38
DDR1-261ENST00000507901 TRPM1Q7Z4N2 1603 aa23.69■■□□□ 1.38
DDR1-261ENST00000507901 C19orf44Q9H6X5 657 aa23.68■■□□□ 1.38
DDR1-261ENST00000507901 PLEKHH1Q9ULM0 1364 aa23.66■■□□□ 1.38
DDR1-261ENST00000507901 ARHGEF28Q8N1W1 1705 aaKnown RBP23.65■■□□□ 1.38
DDR1-261ENST00000507901 STK26Q9P289 416 aa23.64■■□□□ 1.37
DDR1-261ENST00000507901 CDC42BPGQ6DT37 1551 aa23.64■■□□□ 1.37
DDR1-261ENST00000507901 MST1RQ04912 1400 aa23.62■■□□□ 1.37
DDR1-261ENST00000507901 ROBO1Q9Y6N7 1651 aa23.62■■□□□ 1.37
DDR1-261ENST00000507901 NBPF1Q3BBV0 1214 aa23.61■■□□□ 1.37
DDR1-261ENST00000507901 WAPLQ7Z5K2 1190 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms