RNA–Protein interactions for RNA: ENST00000507723.1

TMED9-204, Transcript of transmembrane p24 trafficking protein 9, humanhuman

TSL 2

Gene TMED9, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED9-204ENST00000507723 RPRD2Q5VT52 1461 aaKnown RBP22.22■■□□□ 1.15
TMED9-204ENST00000507723 NWD1Q149M9 1564 aa22.21■■□□□ 1.15
TMED9-204ENST00000507723 PPP1R15AO75807 674 aaPredicted RBP22.19■■□□□ 1.14
TMED9-204ENST00000507723 POTEAQ6S8J7 498 aa22.19■■□□□ 1.14
TMED9-204ENST00000507723 RBM33Q96EV2 1170 aaKnown RBP22.19■■□□□ 1.14
TMED9-204ENST00000507723 SLAIN2Q9P270 581 aa22.19■■□□□ 1.14
TMED9-204ENST00000507723 ADGRL2O95490 1459 aa22.17■■□□□ 1.14
TMED9-204ENST00000507723 JCADQ9P266 1359 aa22.17■■□□□ 1.14
TMED9-204ENST00000507723 PLEKHG1Q9ULL1 1385 aa22.17■■□□□ 1.14
TMED9-204ENST00000507723 ANKRD50Q9ULJ7 1429 aa22.14■■□□□ 1.14
TMED9-204ENST00000507723 NCOA3Q9Y6Q9 1424 aa22.14■■□□□ 1.14
TMED9-204ENST00000507723 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.13
TMED9-204ENST00000507723 ZFYVE9O95405 1425 aa22.13■■□□□ 1.13
TMED9-204ENST00000507723 RIMS2Q9UQ26 1411 aa22.13■■□□□ 1.13
TMED9-204ENST00000507723 C14orf37Q86TY3 774 aa22.11■■□□□ 1.13
TMED9-204ENST00000507723 TBX22Q9Y458 520 aa22.11■■□□□ 1.13
TMED9-204ENST00000507723 PHLPP1O60346 1717 aa22.11■■□□□ 1.13
TMED9-204ENST00000507723 FAM50AQ14320 339 aaKnown RBP22.1■■□□□ 1.13
TMED9-204ENST00000507723 SPATA31A6Q5VVP1 1343 aa22.08■■□□□ 1.13
TMED9-204ENST00000507723 CADPS2Q86UW7 1296 aa22.08■■□□□ 1.13
TMED9-204ENST00000507723 CHGAP10645 457 aaKnown RBP22.06■■□□□ 1.12
TMED9-204ENST00000507723 MEX3CQ5U5Q3 659 aaKnown RBP22.06■■□□□ 1.12
TMED9-204ENST00000507723 PIK3R4Q99570 1358 aa22.06■■□□□ 1.12
TMED9-204ENST00000507723 CHD2O14647 1828 aaKnown RBP22.06■■□□□ 1.12
TMED9-204ENST00000507723 ATF3P18847 181 aa22.05■■□□□ 1.12
TMED9-204ENST00000507723 TMEM131LA2VDJ0 1609 aa22.05■■□□□ 1.12
TMED9-204ENST00000507723 ZNF772Q68DY9 489 aaPredicted RBP22.04■■□□□ 1.12
TMED9-204ENST00000507723 C19orf44Q9H6X5 657 aa22.04■■□□□ 1.12
TMED9-204ENST00000507723 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
TMED9-204ENST00000507723 DIP2AQ14689 1571 aa22.04■■□□□ 1.12
TMED9-204ENST00000507723 COL16A1Q07092 1604 aaPredicted RBP22.02■■□□□ 1.11
TMED9-204ENST00000507723 ADAMTS13Q76LX8 1427 aa21.98■■□□□ 1.11
TMED9-204ENST00000507723 MYO5BQ9ULV0 1848 aa21.98■■□□□ 1.11
TMED9-204ENST00000507723 UNC13BO14795 1591 aa21.98■■□□□ 1.11
TMED9-204ENST00000507723 AHDC1Q5TGY3 1603 aaPredicted RBP21.98■■□□□ 1.11
TMED9-204ENST00000507723 TRPM2O94759 1503 aa21.96■■□□□ 1.11
TMED9-204ENST00000507723 NUTM2DQ5VT03 806 aaPredicted RBP21.95■■□□□ 1.1
TMED9-204ENST00000507723 LRP6O75581 1613 aa21.95■■□□□ 1.1
TMED9-204ENST00000507723 SETD1AO15047 1707 aaKnown RBP21.94■■□□□ 1.1
TMED9-204ENST00000507723 AMOTL2Q9Y2J4 779 aa21.94■■□□□ 1.1
TMED9-204ENST00000507723 ROCK1Q13464 1354 aa21.94■■□□□ 1.1
TMED9-204ENST00000507723 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.94■■□□□ 1.1
TMED9-204ENST00000507723 DCCP43146 1447 aa21.93■■□□□ 1.1
TMED9-204ENST00000507723 SHPRHQ149N8 1683 aa21.92■■□□□ 1.1
TMED9-204ENST00000507723 PPARGC1BQ86YN6 1023 aaKnown RBP21.92■■□□□ 1.1
TMED9-204ENST00000507723 RXRBP28702 533 aa21.91■■□□□ 1.1
TMED9-204ENST00000507723 BRINP3Q76B58 766 aa21.91■■□□□ 1.1
TMED9-204ENST00000507723 TRIM52Q96A61 297 aa21.91■■□□□ 1.1
TMED9-204ENST00000507723 E9PCH4 1651 aa21.91■■□□□ 1.1
TMED9-204ENST00000507723 IQGAP3Q86VI3 1631 aa21.9■■□□□ 1.1
TMED9-204ENST00000507723 NUP155O75694 1391 aa21.89■■□□□ 1.1
TMED9-204ENST00000507723 UPF1Q92900 1129 aaKnown RBP eCLIP21.89■■□□□ 1.09
TMED9-204ENST00000507723 NUTM2BA6NNL0 878 aaPredicted RBP21.86■■□□□ 1.09
TMED9-204ENST00000507723 NUTM2EB1AL46 878 aaPredicted RBP21.86■■□□□ 1.09
TMED9-204ENST00000507723 NUTM2AQ8IVF1 878 aaPredicted RBP21.86■■□□□ 1.09
TMED9-204ENST00000507723 CDK12Q9NYV4 1490 aaPredicted RBP21.85■■□□□ 1.09
TMED9-204ENST00000507723 PTPRUQ92729 1446 aa21.85■■□□□ 1.09
TMED9-204ENST00000507723 SETD5Q9C0A6 1442 aa21.84■■□□□ 1.09
TMED9-204ENST00000507723 LRRC59Q96AG4 307 aaKnown RBP21.84■■□□□ 1.09
TMED9-204ENST00000507723 ASXL1Q8IXJ9 1541 aa21.84■■□□□ 1.09
TMED9-204ENST00000507723 ZNF326Q5BKZ1 582 aaKnown RBP21.83■■□□□ 1.09
TMED9-204ENST00000507723 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
TMED9-204ENST00000507723 AFF2P51816 1311 aa21.81■■□□□ 1.08
TMED9-204ENST00000507723 MST1RQ04912 1400 aa21.8■■□□□ 1.08
TMED9-204ENST00000507723 XRN1Q8IZH2 1706 aaKnown RBP21.79■■□□□ 1.08
TMED9-204ENST00000507723 ADGRL3Q9HAR2 1447 aa21.77■■□□□ 1.08
TMED9-204ENST00000507723 ITGAEP38570 1179 aa21.76■■□□□ 1.07
TMED9-204ENST00000507723 METP08581 1390 aa21.75■■□□□ 1.07
TMED9-204ENST00000507723 RBM6P78332 1123 aaKnown RBP21.75■■□□□ 1.07
TMED9-204ENST00000507723 C8orf37Q96NL8 207 aa21.75■■□□□ 1.07
TMED9-204ENST00000507723 NHSL1Q5SYE7 1610 aa21.75■■□□□ 1.07
TMED9-204ENST00000507723 NRXN3Q9Y4C0 1643 aa21.75■■□□□ 1.07
TMED9-204ENST00000507723 SPHKAPQ2M3C7 1700 aa21.73■■□□□ 1.07
TMED9-204ENST00000507723 QTRT2Q9H974 415 aaKnown RBP21.73■■□□□ 1.07
TMED9-204ENST00000507723 PNPLA6Q8IY17 1366 aa21.72■■□□□ 1.07
TMED9-204ENST00000507723 NGLY1Q96IV0 654 aa21.71■■□□□ 1.07
TMED9-204ENST00000507723 RGS12O14924 1447 aa21.68■■□□□ 1.06
TMED9-204ENST00000507723 C1orf167Q5SNV9 1468 aa21.67■■□□□ 1.06
TMED9-204ENST00000507723 NEXMIFQ5QGS0 1516 aa21.66■■□□□ 1.06
TMED9-204ENST00000507723 PTCH1Q13635 1447 aa21.66■■□□□ 1.06
TMED9-204ENST00000507723 VGFO15240 615 aaPredicted RBP21.66■■□□□ 1.06
TMED9-204ENST00000507723 FOXD1Q16676 465 aa21.66■■□□□ 1.06
TMED9-204ENST00000507723 DDX17Q92841 729 aaKnown RBP21.66■■□□□ 1.06
TMED9-204ENST00000507723 ADAMTS2O95450 1211 aa21.65■■□□□ 1.06
TMED9-204ENST00000507723 RRBP1Q9P2E9 1410 aaKnown RBP21.64■■□□□ 1.06
TMED9-204ENST00000507723 NALCNQ8IZF0 1738 aa21.63■■□□□ 1.05
TMED9-204ENST00000507723 ATAD2Q6PL18 1390 aa21.63■■□□□ 1.05
TMED9-204ENST00000507723 TRPC5Q9UL62 973 aaPredicted RBP21.62■■□□□ 1.05
TMED9-204ENST00000507723 CLTCL1P53675 1640 aa21.62■■□□□ 1.05
TMED9-204ENST00000507723 SOS2Q07890 1332 aaPredicted RBP21.61■■□□□ 1.05
TMED9-204ENST00000507723 USP21Q9UK80 565 aa21.61■■□□□ 1.05
TMED9-204ENST00000507723 RPGRIP1LQ68CZ1 1315 aa21.59■■□□□ 1.05
TMED9-204ENST00000507723 LAMC1P11047 1609 aa21.59■■□□□ 1.05
TMED9-204ENST00000507723 PRAG1Q86YV5 1406 aa21.59■■□□□ 1.05
TMED9-204ENST00000507723 KIF1BO60333 1816 aa21.59■■□□□ 1.05
TMED9-204ENST00000507723 HFM1A2PYH4 1435 aa21.58■■□□□ 1.05
TMED9-204ENST00000507723 ROBO2Q9HCK4 1378 aa21.58■■□□□ 1.04
TMED9-204ENST00000507723 ORAI2Q96SN7 254 aa21.57■■□□□ 1.04
TMED9-204ENST00000507723 FNBP4Q8N3X1 1017 aaPredicted RBP21.56■■□□□ 1.04
TMED9-204ENST00000507723 NPHP3Q7Z494 1330 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms