RNA–Protein interactions for RNA: ENST00000506981.1

LMNA-221, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-221ENST00000506981 PPP1R15AO75807 674 aaPredicted RBP28.62■■■□□ 2.17
LMNA-221ENST00000506981 CERKQ8TCT0 537 aa28.61■■■□□ 2.17
LMNA-221ENST00000506981 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.6■■■□□ 2.17
LMNA-221ENST00000506981 FOXD1Q16676 465 aa28.59■■■□□ 2.17
LMNA-221ENST00000506981 HRCP23327 699 aa28.58■■■□□ 2.17
LMNA-221ENST00000506981 ZNF326Q5BKZ1 582 aaKnown RBP28.57■■■□□ 2.16
LMNA-221ENST00000506981 BCANQ96GW7 911 aa28.57■■■□□ 2.16
LMNA-221ENST00000506981 CCDC144AA2RUR9 1427 aa28.56■■■□□ 2.16
LMNA-221ENST00000506981 CPS1P31327 1500 aa28.56■■■□□ 2.16
LMNA-221ENST00000506981 PLEKHG1Q9ULL1 1385 aa28.54■■■□□ 2.16
LMNA-221ENST00000506981 STRCP1A6NGW2 1772 aa28.54■■■□□ 2.16
LMNA-221ENST00000506981 IQSEC2Q5JU85 1478 aa28.53■■■□□ 2.16
LMNA-221ENST00000506981 NEXMIFQ5QGS0 1516 aa28.5■■■□□ 2.15
LMNA-221ENST00000506981 PPLO60437 1756 aa28.5■■■□□ 2.15
LMNA-221ENST00000506981 NUTM2DQ5VT03 806 aaPredicted RBP28.49■■■□□ 2.15
LMNA-221ENST00000506981 DIP2AQ14689 1571 aa28.48■■■□□ 2.15
LMNA-221ENST00000506981 FBXO41Q8TF61 875 aa28.46■■■□□ 2.15
LMNA-221ENST00000506981 SLC26A8Q96RN1 970 aa28.46■■■□□ 2.15
LMNA-221ENST00000506981 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
LMNA-221ENST00000506981 CHD2O14647 1828 aaKnown RBP28.45■■■□□ 2.14
LMNA-221ENST00000506981 TRIM26Q12899 539 aaPredicted RBP28.43■■■□□ 2.14
LMNA-221ENST00000506981 IFT172Q9UG01 1749 aa28.42■■■□□ 2.14
LMNA-221ENST00000506981 SETBP1Q9Y6X0 1596 aa28.41■■■□□ 2.14
LMNA-221ENST00000506981 NWD1Q149M9 1564 aa28.41■■■□□ 2.14
LMNA-221ENST00000506981 RPGRIP1LQ68CZ1 1315 aa28.41■■■□□ 2.14
LMNA-221ENST00000506981 NRXN3Q9Y4C0 1643 aa28.4■■■□□ 2.14
LMNA-221ENST00000506981 ILDR1Q86SU0 546 aaPredicted RBP28.39■■■□□ 2.14
LMNA-221ENST00000506981 ADAMTS13Q76LX8 1427 aa28.38■■■□□ 2.13
LMNA-221ENST00000506981 SPATA31E1Q6ZUB1 1445 aa28.36■■■□□ 2.13
LMNA-221ENST00000506981 VGFO15240 615 aaPredicted RBP28.36■■■□□ 2.13
LMNA-221ENST00000506981 TBX22Q9Y458 520 aa28.36■■■□□ 2.13
LMNA-221ENST00000506981 LRRC7Q96NW7 1537 aa28.36■■■□□ 2.13
LMNA-221ENST00000506981 XIRP1Q702N8 1843 aaKnown RBP28.36■■■□□ 2.13
LMNA-221ENST00000506981 ANKRD30BQ9BXX2 1392 aa28.35■■■□□ 2.13
LMNA-221ENST00000506981 NKTRP30414 1462 aaKnown RBP28.34■■■□□ 2.13
LMNA-221ENST00000506981 KCNA6P17658 529 aa28.34■■■□□ 2.13
LMNA-221ENST00000506981 RGL3Q3MIN7 710 aa28.34■■■□□ 2.13
LMNA-221ENST00000506981 PIK3R4Q99570 1358 aa28.32■■■□□ 2.12
LMNA-221ENST00000506981 SETD1AO15047 1707 aaKnown RBP28.28■■■□□ 2.12
LMNA-221ENST00000506981 UBAP1LF5GYI3 381 aa28.26■■■□□ 2.11
LMNA-221ENST00000506981 PROSER2Q86WR7 435 aaPredicted RBP28.25■■■□□ 2.11
LMNA-221ENST00000506981 XRN1Q8IZH2 1706 aaKnown RBP28.25■■■□□ 2.11
LMNA-221ENST00000506981 ALKQ9UM73 1620 aa28.25■■■□□ 2.11
LMNA-221ENST00000506981 TMEM94Q12767 1356 aa28.22■■■□□ 2.11
LMNA-221ENST00000506981 TOM1O60784 492 aa28.21■■■□□ 2.11
LMNA-221ENST00000506981 MYOM2P54296 1465 aa28.2■■■□□ 2.1
LMNA-221ENST00000506981 PTPRUQ92729 1446 aa28.18■■■□□ 2.1
LMNA-221ENST00000506981 LAMC1P11047 1609 aa28.18■■■□□ 2.1
LMNA-221ENST00000506981 AMOTL2Q9Y2J4 779 aa28.18■■■□□ 2.1
LMNA-221ENST00000506981 METP08581 1390 aa28.18■■■□□ 2.1
LMNA-221ENST00000506981 ADGRF5Q8IZF2 1346 aa28.18■■■□□ 2.1
LMNA-221ENST00000506981 PIK3C2GO75747 1445 aa28.15■■■□□ 2.1
LMNA-221ENST00000506981 SCAF1Q9H7N4 1312 aaKnown RBP28.15■■■□□ 2.1
LMNA-221ENST00000506981 MSH6P52701 1360 aa28.13■■■□□ 2.09
LMNA-221ENST00000506981 RBM33Q96EV2 1170 aaKnown RBP28.12■■■□□ 2.09
LMNA-221ENST00000506981 NCOA3Q9Y6Q9 1424 aa28.11■■■□□ 2.09
LMNA-221ENST00000506981 NRXN1Q9ULB1 1477 aa28.11■■■□□ 2.09
LMNA-221ENST00000506981 C14orf37Q86TY3 774 aa28.11■■■□□ 2.09
LMNA-221ENST00000506981 DHX57Q6P158 1386 aaKnown RBP28.1■■■□□ 2.09
LMNA-221ENST00000506981 PIP4K2BP78356 416 aa28.09■■■□□ 2.09
LMNA-221ENST00000506981 KNDC1Q76NI1 1749 aa28.08■■■□□ 2.09
LMNA-221ENST00000506981 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.08■■■□□ 2.09
LMNA-221ENST00000506981 DCAF11Q8TEB1 546 aa28.07■■■□□ 2.08
LMNA-221ENST00000506981 STAC3Q96MF2 364 aa28.06■■■□□ 2.08
LMNA-221ENST00000506981 PTCH1Q13635 1447 aa28.06■■■□□ 2.08
LMNA-221ENST00000506981 KDM2AQ9Y2K7 1162 aa28.04■■■□□ 2.08
LMNA-221ENST00000506981 NALCNQ8IZF0 1738 aa28.04■■■□□ 2.08
LMNA-221ENST00000506981 ASXL1Q8IXJ9 1541 aa28.03■■■□□ 2.08
LMNA-221ENST00000506981 PRAG1Q86YV5 1406 aa28.02■■■□□ 2.08
LMNA-221ENST00000506981 C14orf93Q9H972 538 aaKnown RBP27.99■■■□□ 2.07
LMNA-221ENST00000506981 PCGF6Q9BYE7 350 aa27.98■■■□□ 2.07
LMNA-221ENST00000506981 C19orf44Q9H6X5 657 aa27.98■■■□□ 2.07
LMNA-221ENST00000506981 LRPPRCP42704 1394 aaKnown RBP27.98■■■□□ 2.07
LMNA-221ENST00000506981 ROBO1Q9Y6N7 1651 aa27.97■■■□□ 2.07
LMNA-221ENST00000506981 ATF3P18847 181 aa27.97■■■□□ 2.07
LMNA-221ENST00000506981 CFAP70Q5T0N1 1121 aa27.97■■■□□ 2.07
LMNA-221ENST00000506981 DCCP43146 1447 aa27.97■■■□□ 2.07
LMNA-221ENST00000506981 ADGRL3Q9HAR2 1447 aa27.97■■■□□ 2.07
LMNA-221ENST00000506981 ROBO2Q9HCK4 1378 aa27.97■■■□□ 2.07
LMNA-221ENST00000506981 YTHDC2Q9H6S0 1430 aaKnown RBP27.96■■■□□ 2.07
LMNA-221ENST00000506981 TMEM132EQ6IEE7 984 aa27.96■■■□□ 2.07
LMNA-221ENST00000506981 STK26Q9P289 416 aa27.96■■■□□ 2.07
LMNA-221ENST00000506981 KIAA1210Q9ULL0 1709 aa27.95■■■□□ 2.07
LMNA-221ENST00000506981 TECPR2O15040 1411 aa27.95■■■□□ 2.07
LMNA-221ENST00000506981 CADPS2Q86UW7 1296 aa27.95■■■□□ 2.06
LMNA-221ENST00000506981 NEUROD1Q13562 356 aa27.94■■■□□ 2.06
LMNA-221ENST00000506981 SIN3AQ96ST3 1273 aa27.94■■■□□ 2.06
LMNA-221ENST00000506981 ABCC11Q96J66 1382 aa27.92■■■□□ 2.06
LMNA-221ENST00000506981 FAM135BQ49AJ0 1406 aa27.91■■■□□ 2.06
LMNA-221ENST00000506981 SLAIN2Q9P270 581 aa27.9■■■□□ 2.06
LMNA-221ENST00000506981 ADGRB1O14514 1584 aa27.9■■■□□ 2.06
LMNA-221ENST00000506981 HSPA1LP34931 641 aa27.87■■■□□ 2.05
LMNA-221ENST00000506981 DLC1Q96QB1 1528 aa27.86■■■□□ 2.05
LMNA-221ENST00000506981 CDC42BPGQ6DT37 1551 aa27.85■■■□□ 2.05
LMNA-221ENST00000506981 PHLPP1O60346 1717 aa27.84■■■□□ 2.05
LMNA-221ENST00000506981 L3MBTL2Q969R5 705 aa27.84■■■□□ 2.05
LMNA-221ENST00000506981 ARHGEF28Q8N1W1 1705 aaKnown RBP27.82■■■□□ 2.04
LMNA-221ENST00000506981 MST1RQ04912 1400 aa27.82■■■□□ 2.04
LMNA-221ENST00000506981 WAPLQ7Z5K2 1190 aa27.81■■■□□ 2.04
LMNA-221ENST00000506981 SIRT1Q96EB6 747 aa27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms