RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 MPHOSPH9Q99550 1183 aa29.47■■■□□ 2.31
SNX25-204ENST00000506896 TRPM2O94759 1503 aa29.45■■■□□ 2.3
SNX25-204ENST00000506896 RIMS2Q9UQ26 1411 aa29.43■■■□□ 2.3
SNX25-204ENST00000506896 CHGAP10645 457 aaKnown RBP29.42■■■□□ 2.3
SNX25-204ENST00000506896 HDGFP51858 240 aaKnown RBP29.42■■■□□ 2.3
SNX25-204ENST00000506896 UBAP1LF5GYI3 381 aa29.41■■■□□ 2.3
SNX25-204ENST00000506896 TRIM26Q12899 539 aaPredicted RBP29.4■■■□□ 2.3
SNX25-204ENST00000506896 LRRC7Q96NW7 1537 aa29.4■■■□□ 2.3
SNX25-204ENST00000506896 SLC26A8Q96RN1 970 aa29.39■■■□□ 2.3
SNX25-204ENST00000506896 PLEKHG1Q9ULL1 1385 aa29.38■■■□□ 2.29
SNX25-204ENST00000506896 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.37■■■□□ 2.29
SNX25-204ENST00000506896 CLTCL1P53675 1640 aa29.34■■■□□ 2.29
SNX25-204ENST00000506896 KCNA6P17658 529 aa29.33■■■□□ 2.29
SNX25-204ENST00000506896 FOXD1Q16676 465 aa29.33■■■□□ 2.29
SNX25-204ENST00000506896 PPP1R15AO75807 674 aaPredicted RBP29.32■■■□□ 2.28
SNX25-204ENST00000506896 TOM1O60784 492 aa29.31■■■□□ 2.28
SNX25-204ENST00000506896 XIRP1Q702N8 1843 aaKnown RBP29.3■■■□□ 2.28
SNX25-204ENST00000506896 BCANQ96GW7 911 aa29.3■■■□□ 2.28
SNX25-204ENST00000506896 NUTM2DQ5VT03 806 aaPredicted RBP29.29■■■□□ 2.28
SNX25-204ENST00000506896 TBX22Q9Y458 520 aa29.29■■■□□ 2.28
SNX25-204ENST00000506896 ALKQ9UM73 1620 aa29.28■■■□□ 2.28
SNX25-204ENST00000506896 CCDC144AA2RUR9 1427 aa29.28■■■□□ 2.28
SNX25-204ENST00000506896 KIF1BO60333 1816 aa29.27■■■□□ 2.28
SNX25-204ENST00000506896 CHD2O14647 1828 aaKnown RBP29.27■■■□□ 2.28
SNX25-204ENST00000506896 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.27
SNX25-204ENST00000506896 ADAMTS13Q76LX8 1427 aa29.25■■■□□ 2.27
SNX25-204ENST00000506896 NWD1Q149M9 1564 aa29.25■■■□□ 2.27
SNX25-204ENST00000506896 ZNF326Q5BKZ1 582 aaKnown RBP29.22■■■□□ 2.27
SNX25-204ENST00000506896 PIP4K2BP78356 416 aa29.19■■■□□ 2.26
SNX25-204ENST00000506896 PROSER2Q86WR7 435 aaPredicted RBP29.19■■■□□ 2.26
SNX25-204ENST00000506896 DIP2AQ14689 1571 aa29.18■■■□□ 2.26
SNX25-204ENST00000506896 NKTRP30414 1462 aaKnown RBP29.18■■■□□ 2.26
SNX25-204ENST00000506896 TMEM94Q12767 1356 aa29.18■■■□□ 2.26
SNX25-204ENST00000506896 NEXMIFQ5QGS0 1516 aa29.18■■■□□ 2.26
SNX25-204ENST00000506896 PIK3R4Q99570 1358 aa29.16■■■□□ 2.26
SNX25-204ENST00000506896 NRXN3Q9Y4C0 1643 aa29.16■■■□□ 2.26
SNX25-204ENST00000506896 ANKRD30BQ9BXX2 1392 aa29.15■■■□□ 2.26
SNX25-204ENST00000506896 RPGRIP1LQ68CZ1 1315 aa29.15■■■□□ 2.26
SNX25-204ENST00000506896 SETBP1Q9Y6X0 1596 aa29.14■■■□□ 2.26
SNX25-204ENST00000506896 SCAF1Q9H7N4 1312 aaKnown RBP29.14■■■□□ 2.25
SNX25-204ENST00000506896 RBM33Q96EV2 1170 aaKnown RBP29.12■■■□□ 2.25
SNX25-204ENST00000506896 SPATA31E1Q6ZUB1 1445 aa29.11■■■□□ 2.25
SNX25-204ENST00000506896 HSPA1LP34931 641 aa29.09■■■□□ 2.25
SNX25-204ENST00000506896 VGFO15240 615 aaPredicted RBP29.08■■■□□ 2.25
SNX25-204ENST00000506896 PTPRUQ92729 1446 aa29.08■■■□□ 2.25
SNX25-204ENST00000506896 AMOTL2Q9Y2J4 779 aa29.06■■■□□ 2.24
SNX25-204ENST00000506896 NCOA3Q9Y6Q9 1424 aa29.05■■■□□ 2.24
SNX25-204ENST00000506896 PPLO60437 1756 aa29.04■■■□□ 2.24
SNX25-204ENST00000506896 RGL3Q3MIN7 710 aa29.04■■■□□ 2.24
SNX25-204ENST00000506896 METP08581 1390 aa29.02■■■□□ 2.24
SNX25-204ENST00000506896 FAM135BQ49AJ0 1406 aa29■■■□□ 2.23
SNX25-204ENST00000506896 MSH6P52701 1360 aa29■■■□□ 2.23
SNX25-204ENST00000506896 XRN1Q8IZH2 1706 aaKnown RBP28.99■■■□□ 2.23
SNX25-204ENST00000506896 SETD1AO15047 1707 aaKnown RBP28.97■■■□□ 2.23
SNX25-204ENST00000506896 IFT172Q9UG01 1749 aa28.96■■■□□ 2.23
SNX25-204ENST00000506896 DHX57Q6P158 1386 aaKnown RBP28.95■■■□□ 2.22
SNX25-204ENST00000506896 C19orf44Q9H6X5 657 aa28.93■■■□□ 2.22
SNX25-204ENST00000506896 SLAIN2Q9P270 581 aa28.93■■■□□ 2.22
SNX25-204ENST00000506896 PCGF6Q9BYE7 350 aa28.92■■■□□ 2.22
SNX25-204ENST00000506896 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.91■■■□□ 2.22
SNX25-204ENST00000506896 ADGRF5Q8IZF2 1346 aa28.91■■■□□ 2.22
SNX25-204ENST00000506896 MYOM2P54296 1465 aa28.9■■■□□ 2.22
SNX25-204ENST00000506896 ROBO1Q9Y6N7 1651 aa28.89■■■□□ 2.22
SNX25-204ENST00000506896 STAC3Q96MF2 364 aa28.89■■■□□ 2.22
SNX25-204ENST00000506896 C14orf37Q86TY3 774 aa28.88■■■□□ 2.21
SNX25-204ENST00000506896 DISP3Q9P2K9 1392 aa28.88■■■□□ 2.21
SNX25-204ENST00000506896 CADPS2Q86UW7 1296 aa28.86■■■□□ 2.21
SNX25-204ENST00000506896 PIK3C2GO75747 1445 aa28.86■■■□□ 2.21
SNX25-204ENST00000506896 NRXN1Q9ULB1 1477 aa28.85■■■□□ 2.21
SNX25-204ENST00000506896 ATF3P18847 181 aa28.83■■■□□ 2.21
SNX25-204ENST00000506896 PRAG1Q86YV5 1406 aa28.83■■■□□ 2.21
SNX25-204ENST00000506896 DCCP43146 1447 aa28.81■■■□□ 2.2
SNX25-204ENST00000506896 PTCH1Q13635 1447 aa28.8■■■□□ 2.2
SNX25-204ENST00000506896 DCAF11Q8TEB1 546 aa28.8■■■□□ 2.2
SNX25-204ENST00000506896 ROBO2Q9HCK4 1378 aa28.78■■■□□ 2.2
SNX25-204ENST00000506896 ADGRL3Q9HAR2 1447 aa28.77■■■□□ 2.2
SNX25-204ENST00000506896 LAMC1P11047 1609 aa28.76■■■□□ 2.2
SNX25-204ENST00000506896 MED1Q15648 1581 aaPredicted RBP28.75■■■□□ 2.19
SNX25-204ENST00000506896 C14orf93Q9H972 538 aaKnown RBP28.75■■■□□ 2.19
SNX25-204ENST00000506896 NALCNQ8IZF0 1738 aa28.74■■■□□ 2.19
SNX25-204ENST00000506896 SIN3AQ96ST3 1273 aa28.74■■■□□ 2.19
SNX25-204ENST00000506896 KDM2AQ9Y2K7 1162 aa28.74■■■□□ 2.19
SNX25-204ENST00000506896 MST1RQ04912 1400 aa28.71■■■□□ 2.19
SNX25-204ENST00000506896 ASXL1Q8IXJ9 1541 aa28.71■■■□□ 2.19
SNX25-204ENST00000506896 TMEM132EQ6IEE7 984 aa28.71■■■□□ 2.19
SNX25-204ENST00000506896 PHLPP1O60346 1717 aa28.71■■■□□ 2.19
SNX25-204ENST00000506896 NEUROD1Q13562 356 aa28.7■■■□□ 2.18
SNX25-204ENST00000506896 ILDR2Q71H61 639 aa28.7■■■□□ 2.18
SNX25-204ENST00000506896 BRINP3Q76B58 766 aa28.69■■■□□ 2.18
SNX25-204ENST00000506896 LRPPRCP42704 1394 aaKnown RBP28.69■■■□□ 2.18
SNX25-204ENST00000506896 ABCC11Q96J66 1382 aa28.69■■■□□ 2.18
SNX25-204ENST00000506896 TECPR2O15040 1411 aa28.69■■■□□ 2.18
SNX25-204ENST00000506896 CFAP70Q5T0N1 1121 aa28.68■■■□□ 2.18
SNX25-204ENST00000506896 AHDC1Q5TGY3 1603 aaPredicted RBP28.65■■■□□ 2.18
SNX25-204ENST00000506896 STK26Q9P289 416 aa28.65■■■□□ 2.18
SNX25-204ENST00000506896 COL16A1Q07092 1604 aaPredicted RBP28.65■■■□□ 2.18
SNX25-204ENST00000506896 KNDC1Q76NI1 1749 aa28.64■■■□□ 2.18
SNX25-204ENST00000506896 L3MBTL2Q969R5 705 aa28.64■■■□□ 2.18
SNX25-204ENST00000506896 YTHDC2Q9H6S0 1430 aaKnown RBP28.63■■■□□ 2.17
SNX25-204ENST00000506896 WAPLQ7Z5K2 1190 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms