RNA–Protein interactions for RNA: ENST00000506891.1

TTC39B-205, Transcript of tetratricopeptide repeat domain 39B, humanhuman

TSL 1 (best)

Gene TTC39B, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-205ENST00000506891 IQGAP1P46940 1657 aa18.17■□□□□ 0.5
TTC39B-205ENST00000506891 PLEKHG1Q9ULL1 1385 aa18.15■□□□□ 0.5
TTC39B-205ENST00000506891 RIMS2Q9UQ26 1411 aa18.15■□□□□ 0.5
TTC39B-205ENST00000506891 ZFYVE9O95405 1425 aa18.14■□□□□ 0.49
TTC39B-205ENST00000506891 LRRC7Q96NW7 1537 aa18.13■□□□□ 0.49
TTC39B-205ENST00000506891 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
TTC39B-205ENST00000506891 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
TTC39B-205ENST00000506891 PROSER2Q86WR7 435 aaPredicted RBP18.11■□□□□ 0.49
TTC39B-205ENST00000506891 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
TTC39B-205ENST00000506891 SCAF1Q9H7N4 1312 aaKnown RBP18.09■□□□□ 0.49
TTC39B-205ENST00000506891 SPHKAPQ2M3C7 1700 aa18.09■□□□□ 0.49
TTC39B-205ENST00000506891 ZNF326Q5BKZ1 582 aaKnown RBP18.08■□□□□ 0.48
TTC39B-205ENST00000506891 TRPM2O94759 1503 aa18.08■□□□□ 0.48
TTC39B-205ENST00000506891 NUTM2DQ5VT03 806 aaPredicted RBP18.07■□□□□ 0.48
TTC39B-205ENST00000506891 HRCP23327 699 aa18.06■□□□□ 0.48
TTC39B-205ENST00000506891 HSPA1LP34931 641 aa18.06■□□□□ 0.48
TTC39B-205ENST00000506891 SETD5Q9C0A6 1442 aa18.06■□□□□ 0.48
TTC39B-205ENST00000506891 TMEM94Q12767 1356 aa18.05■□□□□ 0.48
TTC39B-205ENST00000506891 PIK3R4Q99570 1358 aa18.05■□□□□ 0.48
TTC39B-205ENST00000506891 RPGRIP1LQ68CZ1 1315 aa18.03■□□□□ 0.48
TTC39B-205ENST00000506891 MPHOSPH9Q99550 1183 aa18.03■□□□□ 0.48
TTC39B-205ENST00000506891 VGFO15240 615 aaPredicted RBP18.02■□□□□ 0.48
TTC39B-205ENST00000506891 NCOA3Q9Y6Q9 1424 aa18.02■□□□□ 0.48
TTC39B-205ENST00000506891 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
TTC39B-205ENST00000506891 ADAMTS13Q76LX8 1427 aa18■□□□□ 0.47
TTC39B-205ENST00000506891 AMOTL2Q9Y2J4 779 aa17.99■□□□□ 0.47
TTC39B-205ENST00000506891 MYO5BQ9ULV0 1848 aa17.99■□□□□ 0.47
TTC39B-205ENST00000506891 DISP3Q9P2K9 1392 aa17.99■□□□□ 0.47
TTC39B-205ENST00000506891 NKTRP30414 1462 aaKnown RBP17.99■□□□□ 0.47
TTC39B-205ENST00000506891 DIP2AQ14689 1571 aa17.99■□□□□ 0.47
TTC39B-205ENST00000506891 STRCP1A6NGW2 1772 aa17.99■□□□□ 0.47
TTC39B-205ENST00000506891 FAM135BQ49AJ0 1406 aa17.98■□□□□ 0.47
TTC39B-205ENST00000506891 RBM33Q96EV2 1170 aaKnown RBP17.98■□□□□ 0.47
TTC39B-205ENST00000506891 MSH6P52701 1360 aa17.97■□□□□ 0.47
TTC39B-205ENST00000506891 C19orf44Q9H6X5 657 aa17.97■□□□□ 0.47
TTC39B-205ENST00000506891 KIF1BO60333 1816 aa17.96■□□□□ 0.47
TTC39B-205ENST00000506891 SLAIN2Q9P270 581 aa17.96■□□□□ 0.47
TTC39B-205ENST00000506891 CLTCL1P53675 1640 aa17.96■□□□□ 0.47
TTC39B-205ENST00000506891 RAB3GAP2Q9H2M9 1393 aa17.94■□□□□ 0.46
TTC39B-205ENST00000506891 FOXD1Q16676 465 aa17.94■□□□□ 0.46
TTC39B-205ENST00000506891 ALKQ9UM73 1620 aa17.94■□□□□ 0.46
TTC39B-205ENST00000506891 NWD1Q149M9 1564 aa17.93■□□□□ 0.46
TTC39B-205ENST00000506891 CCDC144AA2RUR9 1427 aa17.93■□□□□ 0.46
TTC39B-205ENST00000506891 C14orf37Q86TY3 774 aa17.93■□□□□ 0.46
TTC39B-205ENST00000506891 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
TTC39B-205ENST00000506891 SETBP1Q9Y6X0 1596 aa17.91■□□□□ 0.46
TTC39B-205ENST00000506891 ATF3P18847 181 aa17.91■□□□□ 0.46
TTC39B-205ENST00000506891 NEXMIFQ5QGS0 1516 aa17.89■□□□□ 0.45
TTC39B-205ENST00000506891 METP08581 1390 aa17.89■□□□□ 0.45
TTC39B-205ENST00000506891 PTPRUQ92729 1446 aa17.89■□□□□ 0.45
TTC39B-205ENST00000506891 CHD2O14647 1828 aaKnown RBP17.88■□□□□ 0.45
TTC39B-205ENST00000506891 RGL3Q3MIN7 710 aa17.87■□□□□ 0.45
TTC39B-205ENST00000506891 ANKRD30BQ9BXX2 1392 aa17.86■□□□□ 0.45
TTC39B-205ENST00000506891 SPATA31E1Q6ZUB1 1445 aa17.85■□□□□ 0.45
TTC39B-205ENST00000506891 ILDR2Q71H61 639 aa17.84■□□□□ 0.45
TTC39B-205ENST00000506891 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.44
TTC39B-205ENST00000506891 STAC3Q96MF2 364 aa17.82■□□□□ 0.44
TTC39B-205ENST00000506891 PPLO60437 1756 aa17.81■□□□□ 0.44
TTC39B-205ENST00000506891 ADGRF5Q8IZF2 1346 aa17.81■□□□□ 0.44
TTC39B-205ENST00000506891 XIRP1Q702N8 1843 aaKnown RBP17.81■□□□□ 0.44
TTC39B-205ENST00000506891 PRAG1Q86YV5 1406 aa17.81■□□□□ 0.44
TTC39B-205ENST00000506891 DCCP43146 1447 aa17.8■□□□□ 0.44
TTC39B-205ENST00000506891 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
TTC39B-205ENST00000506891 XRN1Q8IZH2 1706 aaKnown RBP17.77■□□□□ 0.44
TTC39B-205ENST00000506891 SOCS7O14512 581 aa17.76■□□□□ 0.43
TTC39B-205ENST00000506891 BRINP3Q76B58 766 aa17.76■□□□□ 0.43
TTC39B-205ENST00000506891 SIRT1Q96EB6 747 aa17.76■□□□□ 0.43
TTC39B-205ENST00000506891 C14orf93Q9H972 538 aaKnown RBP17.76■□□□□ 0.43
TTC39B-205ENST00000506891 IFT172Q9UG01 1749 aa17.75■□□□□ 0.43
TTC39B-205ENST00000506891 PTCH1Q13635 1447 aa17.74■□□□□ 0.43
TTC39B-205ENST00000506891 ROBO2Q9HCK4 1378 aa17.74■□□□□ 0.43
TTC39B-205ENST00000506891 JCADQ9P266 1359 aa17.74■□□□□ 0.43
TTC39B-205ENST00000506891 MYOM2P54296 1465 aa17.74■□□□□ 0.43
TTC39B-205ENST00000506891 ABCC11Q96J66 1382 aa17.73■□□□□ 0.43
TTC39B-205ENST00000506891 ADGRL3Q9HAR2 1447 aa17.72■□□□□ 0.43
TTC39B-205ENST00000506891 NRXN1Q9ULB1 1477 aa17.72■□□□□ 0.43
TTC39B-205ENST00000506891 SETD1AO15047 1707 aaKnown RBP17.72■□□□□ 0.43
TTC39B-205ENST00000506891 PIK3C2GO75747 1445 aa17.72■□□□□ 0.43
TTC39B-205ENST00000506891 LRPPRCP42704 1394 aaKnown RBP17.71■□□□□ 0.43
TTC39B-205ENST00000506891 ROBO1Q9Y6N7 1651 aa17.71■□□□□ 0.42
TTC39B-205ENST00000506891 MED1Q15648 1581 aaPredicted RBP17.7■□□□□ 0.42
TTC39B-205ENST00000506891 TMEM132EQ6IEE7 984 aa17.7■□□□□ 0.42
TTC39B-205ENST00000506891 LRRC59Q96AG4 307 aaKnown RBP17.7■□□□□ 0.42
TTC39B-205ENST00000506891 STK26Q9P289 416 aa17.7■□□□□ 0.42
TTC39B-205ENST00000506891 SPATA31A6Q5VVP1 1343 aa17.7■□□□□ 0.42
TTC39B-205ENST00000506891 MST1RQ04912 1400 aa17.69■□□□□ 0.42
TTC39B-205ENST00000506891 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.69■□□□□ 0.42
TTC39B-205ENST00000506891 LAMC1P11047 1609 aa17.69■□□□□ 0.42
TTC39B-205ENST00000506891 TECPR2O15040 1411 aa17.68■□□□□ 0.42
TTC39B-205ENST00000506891 CFAP70Q5T0N1 1121 aa17.68■□□□□ 0.42
TTC39B-205ENST00000506891 DHX57Q6P158 1386 aaKnown RBP17.67■□□□□ 0.42
TTC39B-205ENST00000506891 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
TTC39B-205ENST00000506891 RGS17Q9UGC6 210 aaPredicted RBP17.67■□□□□ 0.42
TTC39B-205ENST00000506891 TRIM26Q12899 539 aaPredicted RBP17.66■□□□□ 0.42
TTC39B-205ENST00000506891 DCAF11Q8TEB1 546 aa17.66■□□□□ 0.42
TTC39B-205ENST00000506891 C1orf167Q5SNV9 1468 aa17.64■□□□□ 0.41
TTC39B-205ENST00000506891 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
TTC39B-205ENST00000506891 ORAI2Q96SN7 254 aa17.63■□□□□ 0.41
TTC39B-205ENST00000506891 YTHDC2Q9H6S0 1430 aaKnown RBP17.63■□□□□ 0.41
TTC39B-205ENST00000506891 AHDC1Q5TGY3 1603 aaPredicted RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms