RNA–Protein interactions for RNA: ENST00000506874.1

SNX2-205, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 200 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-205ENST00000506874 GCC2Q8IWJ2 1684 aa24.95■■□□□ 1.58
SNX2-205ENST00000506874 PPP1R15AO75807 674 aaPredicted RBP24.95■■□□□ 1.58
SNX2-205ENST00000506874 CHGAP10645 457 aaKnown RBP24.95■■□□□ 1.58
SNX2-205ENST00000506874 ITGAEP38570 1179 aa24.95■■□□□ 1.58
SNX2-205ENST00000506874 PPARGC1BQ86YN6 1023 aaKnown RBP24.95■■□□□ 1.58
SNX2-205ENST00000506874 UNC13BO14795 1591 aa24.94■■□□□ 1.58
SNX2-205ENST00000506874 RIMS2Q9UQ26 1411 aa24.93■■□□□ 1.58
SNX2-205ENST00000506874 ZFYVE9O95405 1425 aa24.91■■□□□ 1.58
SNX2-205ENST00000506874 TMEM131LA2VDJ0 1609 aa24.9■■□□□ 1.58
SNX2-205ENST00000506874 FAM135BQ49AJ0 1406 aa24.9■■□□□ 1.58
SNX2-205ENST00000506874 HDGFP51858 240 aaKnown RBP24.9■■□□□ 1.58
SNX2-205ENST00000506874 E9PCH4 1651 aa24.89■■□□□ 1.58
SNX2-205ENST00000506874 NUTM2DQ5VT03 806 aaPredicted RBP24.89■■□□□ 1.58
SNX2-205ENST00000506874 ROCK1Q13464 1354 aa24.89■■□□□ 1.57
SNX2-205ENST00000506874 PLEKHG1Q9ULL1 1385 aa24.89■■□□□ 1.57
SNX2-205ENST00000506874 NWD1Q149M9 1564 aa24.88■■□□□ 1.57
SNX2-205ENST00000506874 NKTRP30414 1462 aaKnown RBP24.88■■□□□ 1.57
SNX2-205ENST00000506874 ROBO1Q9Y6N7 1651 aa24.86■■□□□ 1.57
SNX2-205ENST00000506874 NUP155O75694 1391 aa24.85■■□□□ 1.57
SNX2-205ENST00000506874 CHD2O14647 1828 aaKnown RBP24.85■■□□□ 1.57
SNX2-205ENST00000506874 IQGAP3Q86VI3 1631 aa24.85■■□□□ 1.57
SNX2-205ENST00000506874 MSH6P52701 1360 aa24.84■■□□□ 1.57
SNX2-205ENST00000506874 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.83■■□□□ 1.57
SNX2-205ENST00000506874 TBX22Q9Y458 520 aa24.8■■□□□ 1.56
SNX2-205ENST00000506874 SLAIN2Q9P270 581 aa24.79■■□□□ 1.56
SNX2-205ENST00000506874 RGS17Q9UGC6 210 aaPredicted RBP24.79■■□□□ 1.56
SNX2-205ENST00000506874 C14orf37Q86TY3 774 aa24.78■■□□□ 1.56
SNX2-205ENST00000506874 ADAMTS13Q76LX8 1427 aa24.76■■□□□ 1.55
SNX2-205ENST00000506874 PHLPP1O60346 1717 aa24.72■■□□□ 1.55
SNX2-205ENST00000506874 DIP2AQ14689 1571 aa24.71■■□□□ 1.55
SNX2-205ENST00000506874 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
SNX2-205ENST00000506874 AMOTL2Q9Y2J4 779 aa24.68■■□□□ 1.54
SNX2-205ENST00000506874 SPHKAPQ2M3C7 1700 aa24.68■■□□□ 1.54
SNX2-205ENST00000506874 PIK3R4Q99570 1358 aa24.67■■□□□ 1.54
SNX2-205ENST00000506874 POTEAQ6S8J7 498 aa24.67■■□□□ 1.54
SNX2-205ENST00000506874 NCOA3Q9Y6Q9 1424 aa24.67■■□□□ 1.54
SNX2-205ENST00000506874 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.66■■□□□ 1.54
SNX2-205ENST00000506874 TRPM2O94759 1503 aa24.66■■□□□ 1.54
SNX2-205ENST00000506874 ATF3P18847 181 aa24.66■■□□□ 1.54
SNX2-205ENST00000506874 PTPRUQ92729 1446 aa24.65■■□□□ 1.54
SNX2-205ENST00000506874 C19orf44Q9H6X5 657 aa24.65■■□□□ 1.54
SNX2-205ENST00000506874 JCADQ9P266 1359 aa24.65■■□□□ 1.54
SNX2-205ENST00000506874 CADPS2Q86UW7 1296 aa24.64■■□□□ 1.54
SNX2-205ENST00000506874 COL16A1Q07092 1604 aaPredicted RBP24.61■■□□□ 1.53
SNX2-205ENST00000506874 NRXN3Q9Y4C0 1643 aa24.6■■□□□ 1.53
SNX2-205ENST00000506874 RRBP1Q9P2E9 1410 aaKnown RBP24.59■■□□□ 1.53
SNX2-205ENST00000506874 CLTCL1P53675 1640 aa24.57■■□□□ 1.52
SNX2-205ENST00000506874 SETBP1Q9Y6X0 1596 aa24.57■■□□□ 1.52
SNX2-205ENST00000506874 NAIPQ13075 1403 aa24.56■■□□□ 1.52
SNX2-205ENST00000506874 TRIM52Q96A61 297 aa24.55■■□□□ 1.52
SNX2-205ENST00000506874 XRN1Q8IZH2 1706 aaKnown RBP24.55■■□□□ 1.52
SNX2-205ENST00000506874 METP08581 1390 aa24.54■■□□□ 1.52
SNX2-205ENST00000506874 MEX3CQ5U5Q3 659 aaKnown RBP24.53■■□□□ 1.52
SNX2-205ENST00000506874 BRINP3Q76B58 766 aa24.53■■□□□ 1.52
SNX2-205ENST00000506874 KIF1BO60333 1816 aa24.53■■□□□ 1.52
SNX2-205ENST00000506874 AHDC1Q5TGY3 1603 aaPredicted RBP24.53■■□□□ 1.52
SNX2-205ENST00000506874 NEXMIFQ5QGS0 1516 aa24.51■■□□□ 1.51
SNX2-205ENST00000506874 LRP6O75581 1613 aa24.51■■□□□ 1.51
SNX2-205ENST00000506874 SPATA31A6Q5VVP1 1343 aa24.5■■□□□ 1.51
SNX2-205ENST00000506874 DCCP43146 1447 aa24.48■■□□□ 1.51
SNX2-205ENST00000506874 SHPRHQ149N8 1683 aa24.47■■□□□ 1.51
SNX2-205ENST00000506874 SETD1AO15047 1707 aaKnown RBP24.47■■□□□ 1.51
SNX2-205ENST00000506874 MST1RQ04912 1400 aa24.46■■□□□ 1.51
SNX2-205ENST00000506874 NUTM2BA6NNL0 878 aaPredicted RBP24.46■■□□□ 1.51
SNX2-205ENST00000506874 NUTM2EB1AL46 878 aaPredicted RBP24.46■■□□□ 1.51
SNX2-205ENST00000506874 NUTM2AQ8IVF1 878 aaPredicted RBP24.46■■□□□ 1.51
SNX2-205ENST00000506874 ASXL1Q8IXJ9 1541 aa24.45■■□□□ 1.51
SNX2-205ENST00000506874 SLC4A1APQ9BWU0 796 aaKnown RBP24.44■■□□□ 1.5
SNX2-205ENST00000506874 HFM1A2PYH4 1435 aa24.44■■□□□ 1.5
SNX2-205ENST00000506874 ADGRL3Q9HAR2 1447 aa24.43■■□□□ 1.5
SNX2-205ENST00000506874 NALCNQ8IZF0 1738 aa24.41■■□□□ 1.5
SNX2-205ENST00000506874 VGFO15240 615 aaPredicted RBP24.41■■□□□ 1.5
SNX2-205ENST00000506874 ZNF772Q68DY9 489 aaPredicted RBP24.41■■□□□ 1.5
SNX2-205ENST00000506874 DDX17Q92841 729 aaKnown RBP24.41■■□□□ 1.5
SNX2-205ENST00000506874 NHSL1Q5SYE7 1610 aa24.39■■□□□ 1.49
SNX2-205ENST00000506874 FOXD1Q16676 465 aa24.38■■□□□ 1.49
SNX2-205ENST00000506874 SETD5Q9C0A6 1442 aa24.36■■□□□ 1.49
SNX2-205ENST00000506874 LRRC59Q96AG4 307 aaKnown RBP24.36■■□□□ 1.49
SNX2-205ENST00000506874 RPGRIP1LQ68CZ1 1315 aa24.35■■□□□ 1.49
SNX2-205ENST00000506874 ROBO2Q9HCK4 1378 aa24.34■■□□□ 1.49
SNX2-205ENST00000506874 PPLO60437 1756 aa24.34■■□□□ 1.49
SNX2-205ENST00000506874 C1orf167Q5SNV9 1468 aa24.32■■□□□ 1.48
SNX2-205ENST00000506874 PTCH1Q13635 1447 aa24.32■■□□□ 1.48
SNX2-205ENST00000506874 AFF2P51816 1311 aa24.32■■□□□ 1.48
SNX2-205ENST00000506874 RXRBP28702 533 aa24.3■■□□□ 1.48
SNX2-205ENST00000506874 PNPLA6Q8IY17 1366 aa24.29■■□□□ 1.48
SNX2-205ENST00000506874 C8orf37Q96NL8 207 aa24.29■■□□□ 1.48
SNX2-205ENST00000506874 ORAI2Q96SN7 254 aa24.29■■□□□ 1.48
SNX2-205ENST00000506874 RGL3Q3MIN7 710 aa24.28■■□□□ 1.48
SNX2-205ENST00000506874 ADGRF5Q8IZF2 1346 aa24.25■■□□□ 1.47
SNX2-205ENST00000506874 CCDC144AA2RUR9 1427 aa24.25■■□□□ 1.47
SNX2-205ENST00000506874 ADAMTS2O95450 1211 aa24.23■■□□□ 1.47
SNX2-205ENST00000506874 UPF1Q92900 1129 aaKnown RBP eCLIP24.23■■□□□ 1.47
SNX2-205ENST00000506874 MPHOSPH9Q99550 1183 aa24.23■■□□□ 1.47
SNX2-205ENST00000506874 STK26Q9P289 416 aa24.23■■□□□ 1.47
SNX2-205ENST00000506874 PRAG1Q86YV5 1406 aa24.22■■□□□ 1.47
SNX2-205ENST00000506874 QTRT2Q9H974 415 aaKnown RBP24.21■■□□□ 1.47
SNX2-205ENST00000506874 SOS2Q07890 1332 aaPredicted RBP24.2■■□□□ 1.46
SNX2-205ENST00000506874 NGLY1Q96IV0 654 aa24.2■■□□□ 1.46
SNX2-205ENST00000506874 LAMC1P11047 1609 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms