RNA–Protein interactions for RNA: ENST00000506165.1

APBB3-211, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-211ENST00000506165 TMEM131LA2VDJ0 1609 aa27.1■■□□□ 1.93
APBB3-211ENST00000506165 COL16A1Q07092 1604 aaPredicted RBP27.1■■□□□ 1.93
APBB3-211ENST00000506165 PROSER2Q86WR7 435 aaPredicted RBP27.1■■□□□ 1.93
APBB3-211ENST00000506165 STAG3Q9UJ98 1225 aa27.1■■□□□ 1.93
APBB3-211ENST00000506165 ADGRL2O95490 1459 aa27.1■■□□□ 1.93
APBB3-211ENST00000506165 ANKRD30AQ9BXX3 1397 aa27.09■■□□□ 1.93
APBB3-211ENST00000506165 RPRD2Q5VT52 1461 aaKnown RBP27.06■■□□□ 1.92
APBB3-211ENST00000506165 SLC52A1Q9NWF4 448 aa27.04■■□□□ 1.92
APBB3-211ENST00000506165 CHIC2Q9UKJ5 165 aa27.03■■□□□ 1.92
APBB3-211ENST00000506165 PLEKHG1Q9ULL1 1385 aa27.02■■□□□ 1.92
APBB3-211ENST00000506165 MSH6P52701 1360 aa27.01■■□□□ 1.91
APBB3-211ENST00000506165 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.01■■□□□ 1.91
APBB3-211ENST00000506165 SLAIN2Q9P270 581 aa27■■□□□ 1.91
APBB3-211ENST00000506165 SHPRHQ149N8 1683 aa26.98■■□□□ 1.91
APBB3-211ENST00000506165 JCADQ9P266 1359 aa26.98■■□□□ 1.91
APBB3-211ENST00000506165 UNC13BO14795 1591 aa26.98■■□□□ 1.91
APBB3-211ENST00000506165 E9PCH4 1651 aa26.98■■□□□ 1.91
APBB3-211ENST00000506165 LRP6O75581 1613 aa26.97■■□□□ 1.91
APBB3-211ENST00000506165 RIMS2Q9UQ26 1411 aa26.96■■□□□ 1.91
APBB3-211ENST00000506165 NCOA3Q9Y6Q9 1424 aa26.96■■□□□ 1.91
APBB3-211ENST00000506165 AHDC1Q5TGY3 1603 aaPredicted RBP26.95■■□□□ 1.91
APBB3-211ENST00000506165 ADAMTS13Q76LX8 1427 aa26.93■■□□□ 1.9
APBB3-211ENST00000506165 ANKRD50Q9ULJ7 1429 aa26.93■■□□□ 1.9
APBB3-211ENST00000506165 DIP2AQ14689 1571 aa26.92■■□□□ 1.9
APBB3-211ENST00000506165 TBX22Q9Y458 520 aa26.91■■□□□ 1.9
APBB3-211ENST00000506165 IQGAP3Q86VI3 1631 aa26.87■■□□□ 1.89
APBB3-211ENST00000506165 APLP2Q06481 763 aa26.86■■□□□ 1.89
APBB3-211ENST00000506165 BCANQ96GW7 911 aa26.85■■□□□ 1.89
APBB3-211ENST00000506165 PIK3R4Q99570 1358 aa26.84■■□□□ 1.89
APBB3-211ENST00000506165 SPATA31A6Q5VVP1 1343 aa26.84■■□□□ 1.89
APBB3-211ENST00000506165 NRXN3Q9Y4C0 1643 aa26.83■■□□□ 1.89
APBB3-211ENST00000506165 XRN1Q8IZH2 1706 aaKnown RBP26.82■■□□□ 1.88
APBB3-211ENST00000506165 NHSL1Q5SYE7 1610 aa26.81■■□□□ 1.88
APBB3-211ENST00000506165 HDGFP51858 240 aaKnown RBP26.81■■□□□ 1.88
APBB3-211ENST00000506165 PTPRUQ92729 1446 aa26.81■■□□□ 1.88
APBB3-211ENST00000506165 TRPM2O94759 1503 aa26.8■■□□□ 1.88
APBB3-211ENST00000506165 PPP1R15AO75807 674 aaPredicted RBP26.78■■□□□ 1.88
APBB3-211ENST00000506165 PPARGC1BQ86YN6 1023 aaKnown RBP26.78■■□□□ 1.88
APBB3-211ENST00000506165 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.78■■□□□ 1.88
APBB3-211ENST00000506165 C19orf44Q9H6X5 657 aa26.78■■□□□ 1.88
APBB3-211ENST00000506165 CADPS2Q86UW7 1296 aa26.76■■□□□ 1.87
APBB3-211ENST00000506165 UPF1Q92900 1129 aaKnown RBP eCLIP26.76■■□□□ 1.87
APBB3-211ENST00000506165 SETBP1Q9Y6X0 1596 aa26.73■■□□□ 1.87
APBB3-211ENST00000506165 NUTM2DQ5VT03 806 aaPredicted RBP26.73■■□□□ 1.87
APBB3-211ENST00000506165 SPHKAPQ2M3C7 1700 aa26.73■■□□□ 1.87
APBB3-211ENST00000506165 DCCP43146 1447 aa26.73■■□□□ 1.87
APBB3-211ENST00000506165 FAM50AQ14320 339 aaKnown RBP26.72■■□□□ 1.87
APBB3-211ENST00000506165 ZNF772Q68DY9 489 aaPredicted RBP26.72■■□□□ 1.87
APBB3-211ENST00000506165 ASXL1Q8IXJ9 1541 aa26.71■■□□□ 1.87
APBB3-211ENST00000506165 CDK12Q9NYV4 1490 aaPredicted RBP26.71■■□□□ 1.87
APBB3-211ENST00000506165 BRINP3Q76B58 766 aa26.71■■□□□ 1.87
APBB3-211ENST00000506165 ROCK1Q13464 1354 aa26.7■■□□□ 1.86
APBB3-211ENST00000506165 SETD5Q9C0A6 1442 aa26.68■■□□□ 1.86
APBB3-211ENST00000506165 CHGAP10645 457 aaKnown RBP26.68■■□□□ 1.86
APBB3-211ENST00000506165 ATF3P18847 181 aa26.68■■□□□ 1.86
APBB3-211ENST00000506165 AMOTL2Q9Y2J4 779 aa26.68■■□□□ 1.86
APBB3-211ENST00000506165 NALCNQ8IZF0 1738 aa26.68■■□□□ 1.86
APBB3-211ENST00000506165 MST1RQ04912 1400 aa26.67■■□□□ 1.86
APBB3-211ENST00000506165 C14orf37Q86TY3 774 aa26.67■■□□□ 1.86
APBB3-211ENST00000506165 MEX3CQ5U5Q3 659 aaKnown RBP26.65■■□□□ 1.86
APBB3-211ENST00000506165 TRIM52Q96A61 297 aa26.65■■□□□ 1.86
APBB3-211ENST00000506165 LAMC1P11047 1609 aa26.64■■□□□ 1.85
APBB3-211ENST00000506165 RXRBP28702 533 aa26.6■■□□□ 1.85
APBB3-211ENST00000506165 SRCAPQ6ZRS2 3230 aa26.6■■□□□ 1.85
APBB3-211ENST00000506165 NUP155O75694 1391 aa26.58■■□□□ 1.84
APBB3-211ENST00000506165 METP08581 1390 aa26.58■■□□□ 1.84
APBB3-211ENST00000506165 NEXMIFQ5QGS0 1516 aa26.57■■□□□ 1.84
APBB3-211ENST00000506165 AFF2P51816 1311 aa26.57■■□□□ 1.84
APBB3-211ENST00000506165 CLTCL1P53675 1640 aa26.56■■□□□ 1.84
APBB3-211ENST00000506165 NUTM2BA6NNL0 878 aaPredicted RBP26.55■■□□□ 1.84
APBB3-211ENST00000506165 NUTM2EB1AL46 878 aaPredicted RBP26.55■■□□□ 1.84
APBB3-211ENST00000506165 NUTM2AQ8IVF1 878 aaPredicted RBP26.55■■□□□ 1.84
APBB3-211ENST00000506165 KIF1BO60333 1816 aa26.55■■□□□ 1.84
APBB3-211ENST00000506165 ADGRL3Q9HAR2 1447 aa26.55■■□□□ 1.84
APBB3-211ENST00000506165 PNPLA6Q8IY17 1366 aa26.54■■□□□ 1.84
APBB3-211ENST00000506165 RGS12O14924 1447 aa26.54■■□□□ 1.84
APBB3-211ENST00000506165 EP400Q96L91 3159 aa26.52■■□□□ 1.84
APBB3-211ENST00000506165 LRRC59Q96AG4 307 aaKnown RBP26.5■■□□□ 1.83
APBB3-211ENST00000506165 DDX17Q92841 729 aaKnown RBP26.48■■□□□ 1.83
APBB3-211ENST00000506165 RRBP1Q9P2E9 1410 aaKnown RBP26.48■■□□□ 1.83
APBB3-211ENST00000506165 C1orf167Q5SNV9 1468 aa26.45■■□□□ 1.82
APBB3-211ENST00000506165 COL22A1Q8NFW1 1626 aaPredicted RBP26.45■■□□□ 1.82
APBB3-211ENST00000506165 RBM6P78332 1123 aaKnown RBP26.44■■□□□ 1.82
APBB3-211ENST00000506165 MARF1Q9Y4F3 1742 aaKnown RBP26.43■■□□□ 1.82
APBB3-211ENST00000506165 PRAG1Q86YV5 1406 aa26.42■■□□□ 1.82
APBB3-211ENST00000506165 QTRT2Q9H974 415 aaKnown RBP26.42■■□□□ 1.82
APBB3-211ENST00000506165 C8orf37Q96NL8 207 aa26.41■■□□□ 1.82
APBB3-211ENST00000506165 PTCH1Q13635 1447 aa26.4■■□□□ 1.82
APBB3-211ENST00000506165 PPLO60437 1756 aa26.4■■□□□ 1.82
APBB3-211ENST00000506165 SOS2Q07890 1332 aaPredicted RBP26.39■■□□□ 1.81
APBB3-211ENST00000506165 ZNF326Q5BKZ1 582 aaKnown RBP26.38■■□□□ 1.81
APBB3-211ENST00000506165 ROBO2Q9HCK4 1378 aa26.35■■□□□ 1.81
APBB3-211ENST00000506165 ITGAEP38570 1179 aa26.32■■□□□ 1.8
APBB3-211ENST00000506165 ORAI2Q96SN7 254 aa26.32■■□□□ 1.8
APBB3-211ENST00000506165 ADAMTS2O95450 1211 aa26.3■■□□□ 1.8
APBB3-211ENST00000506165 FNBP4Q8N3X1 1017 aaPredicted RBP26.3■■□□□ 1.8
APBB3-211ENST00000506165 NGLY1Q96IV0 654 aa26.3■■□□□ 1.8
APBB3-211ENST00000506165 ATRNO75882 1429 aa26.3■■□□□ 1.8
APBB3-211ENST00000506165 MYOM2P54296 1465 aa26.29■■□□□ 1.8
APBB3-211ENST00000506165 CDC42BPGQ6DT37 1551 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms