RNA–Protein interactions for RNA: ENST00000505753.1

SIM1-203, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 2

Gene SIM1, Length 565 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-203ENST00000505753 STAG3Q9UJ98 1225 aa14.01□□□□□ -0.17
SIM1-203ENST00000505753 EID1Q9Y6B2 187 aa14.01□□□□□ -0.17
SIM1-203ENST00000505753 SPHKAPQ2M3C7 1700 aa14.01□□□□□ -0.17
SIM1-203ENST00000505753 RIMS2Q9UQ26 1411 aa13.98□□□□□ -0.17
SIM1-203ENST00000505753 ZNF335Q9H4Z2 1342 aaPredicted RBP13.98□□□□□ -0.17
SIM1-203ENST00000505753 HDGFP51858 240 aaKnown RBP13.98□□□□□ -0.17
SIM1-203ENST00000505753 CERKQ8TCT0 537 aa13.98□□□□□ -0.17
SIM1-203ENST00000505753 CLTCL1P53675 1640 aa13.97□□□□□ -0.17
SIM1-203ENST00000505753 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
SIM1-203ENST00000505753 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
SIM1-203ENST00000505753 IQGAP1P46940 1657 aa13.97□□□□□ -0.17
SIM1-203ENST00000505753 IQSEC2Q5JU85 1478 aa13.96□□□□□ -0.17
SIM1-203ENST00000505753 SPATA31E1Q6ZUB1 1445 aa13.94□□□□□ -0.18
SIM1-203ENST00000505753 ANKRD30BQ9BXX2 1392 aa13.94□□□□□ -0.18
SIM1-203ENST00000505753 RPGRIP1LQ68CZ1 1315 aa13.93□□□□□ -0.18
SIM1-203ENST00000505753 TBX22Q9Y458 520 aa13.93□□□□□ -0.18
SIM1-203ENST00000505753 CPS1P31327 1500 aa13.93□□□□□ -0.18
SIM1-203ENST00000505753 CCDC144AA2RUR9 1427 aa13.92□□□□□ -0.18
SIM1-203ENST00000505753 ADAMTS13Q76LX8 1427 aa13.92□□□□□ -0.18
SIM1-203ENST00000505753 CHGAP10645 457 aaKnown RBP13.92□□□□□ -0.18
SIM1-203ENST00000505753 TRIM26Q12899 539 aaPredicted RBP13.92□□□□□ -0.18
SIM1-203ENST00000505753 MYO5BQ9ULV0 1848 aa13.92□□□□□ -0.18
SIM1-203ENST00000505753 NEXMIFQ5QGS0 1516 aa13.91□□□□□ -0.18
SIM1-203ENST00000505753 SETBP1Q9Y6X0 1596 aa13.89□□□□□ -0.19
SIM1-203ENST00000505753 PIK3R4Q99570 1358 aa13.89□□□□□ -0.19
SIM1-203ENST00000505753 KCNA6P17658 529 aa13.89□□□□□ -0.19
SIM1-203ENST00000505753 SLC26A8Q96RN1 970 aa13.89□□□□□ -0.19
SIM1-203ENST00000505753 VGFO15240 615 aaPredicted RBP13.87□□□□□ -0.19
SIM1-203ENST00000505753 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
SIM1-203ENST00000505753 DIP2AQ14689 1571 aa13.87□□□□□ -0.19
SIM1-203ENST00000505753 STRCP1A6NGW2 1772 aa13.86□□□□□ -0.19
SIM1-203ENST00000505753 LRRC7Q96NW7 1537 aa13.86□□□□□ -0.19
SIM1-203ENST00000505753 KIF1BO60333 1816 aa13.86□□□□□ -0.19
SIM1-203ENST00000505753 ZNF326Q5BKZ1 582 aaKnown RBP13.86□□□□□ -0.19
SIM1-203ENST00000505753 NUTM2DQ5VT03 806 aaPredicted RBP13.86□□□□□ -0.19
SIM1-203ENST00000505753 NWD1Q149M9 1564 aa13.86□□□□□ -0.19
SIM1-203ENST00000505753 NRXN3Q9Y4C0 1643 aa13.86□□□□□ -0.19
SIM1-203ENST00000505753 NKTRP30414 1462 aaKnown RBP13.84□□□□□ -0.19
SIM1-203ENST00000505753 PRAG1Q86YV5 1406 aa13.82□□□□□ -0.2
SIM1-203ENST00000505753 NRXN1Q9ULB1 1477 aa13.82□□□□□ -0.2
SIM1-203ENST00000505753 METP08581 1390 aa13.82□□□□□ -0.2
SIM1-203ENST00000505753 PTPRUQ92729 1446 aa13.81□□□□□ -0.2
SIM1-203ENST00000505753 NCOA3Q9Y6Q9 1424 aa13.81□□□□□ -0.2
SIM1-203ENST00000505753 STAC3Q96MF2 364 aa13.81□□□□□ -0.2
SIM1-203ENST00000505753 ADGRF5Q8IZF2 1346 aa13.81□□□□□ -0.2
SIM1-203ENST00000505753 DISP3Q9P2K9 1392 aa13.81□□□□□ -0.2
SIM1-203ENST00000505753 PPLO60437 1756 aa13.81□□□□□ -0.2
SIM1-203ENST00000505753 RGL3Q3MIN7 710 aa13.8□□□□□ -0.2
SIM1-203ENST00000505753 BCANQ96GW7 911 aa13.8□□□□□ -0.2
SIM1-203ENST00000505753 CHD2O14647 1828 aaKnown RBP13.8□□□□□ -0.2
SIM1-203ENST00000505753 IFT172Q9UG01 1749 aa13.79□□□□□ -0.2
SIM1-203ENST00000505753 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
SIM1-203ENST00000505753 TMEM94Q12767 1356 aa13.79□□□□□ -0.2
SIM1-203ENST00000505753 PIK3C2GO75747 1445 aa13.79□□□□□ -0.2
SIM1-203ENST00000505753 MYOM2P54296 1465 aa13.79□□□□□ -0.2
SIM1-203ENST00000505753 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
SIM1-203ENST00000505753 SOCS7O14512 581 aa13.78□□□□□ -0.2
SIM1-203ENST00000505753 DHX57Q6P158 1386 aaKnown RBP13.78□□□□□ -0.2
SIM1-203ENST00000505753 AMOTL2Q9Y2J4 779 aa13.77□□□□□ -0.21
SIM1-203ENST00000505753 SETD1AO15047 1707 aaKnown RBP13.76□□□□□ -0.21
SIM1-203ENST00000505753 XRN1Q8IZH2 1706 aaKnown RBP13.76□□□□□ -0.21
SIM1-203ENST00000505753 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
SIM1-203ENST00000505753 C14orf93Q9H972 538 aaKnown RBP13.76□□□□□ -0.21
SIM1-203ENST00000505753 TOM1O60784 492 aa13.75□□□□□ -0.21
SIM1-203ENST00000505753 XIRP1Q702N8 1843 aaKnown RBP13.75□□□□□ -0.21
SIM1-203ENST00000505753 UBAP1LF5GYI3 381 aa13.74□□□□□ -0.21
SIM1-203ENST00000505753 TECPR2O15040 1411 aa13.73□□□□□ -0.21
SIM1-203ENST00000505753 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
SIM1-203ENST00000505753 ABCC11Q96J66 1382 aa13.71□□□□□ -0.21
SIM1-203ENST00000505753 ILDR2Q71H61 639 aa13.71□□□□□ -0.21
SIM1-203ENST00000505753 SIRT1Q96EB6 747 aa13.71□□□□□ -0.21
SIM1-203ENST00000505753 C19orf44Q9H6X5 657 aa13.71□□□□□ -0.21
SIM1-203ENST00000505753 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.22
SIM1-203ENST00000505753 ASXL1Q8IXJ9 1541 aa13.7□□□□□ -0.22
SIM1-203ENST00000505753 DCAF11Q8TEB1 546 aa13.7□□□□□ -0.22
SIM1-203ENST00000505753 RBM33Q96EV2 1170 aaKnown RBP13.7□□□□□ -0.22
SIM1-203ENST00000505753 ROBO2Q9HCK4 1378 aa13.7□□□□□ -0.22
SIM1-203ENST00000505753 CFAP70Q5T0N1 1121 aa13.69□□□□□ -0.22
SIM1-203ENST00000505753 DCCP43146 1447 aa13.69□□□□□ -0.22
SIM1-203ENST00000505753 FAM135BQ49AJ0 1406 aa13.69□□□□□ -0.22
SIM1-203ENST00000505753 MSH6P52701 1360 aa13.69□□□□□ -0.22
SIM1-203ENST00000505753 ADGRB1O14514 1584 aa13.67□□□□□ -0.22
SIM1-203ENST00000505753 SIN3AQ96ST3 1273 aa13.67□□□□□ -0.22
SIM1-203ENST00000505753 LAMC1P11047 1609 aa13.67□□□□□ -0.22
SIM1-203ENST00000505753 YTHDC2Q9H6S0 1430 aaKnown RBP13.66□□□□□ -0.22
SIM1-203ENST00000505753 ADGRL3Q9HAR2 1447 aa13.66□□□□□ -0.22
SIM1-203ENST00000505753 TMEM132EQ6IEE7 984 aa13.66□□□□□ -0.22
SIM1-203ENST00000505753 CADPS2Q86UW7 1296 aa13.66□□□□□ -0.22
SIM1-203ENST00000505753 L3MBTL2Q969R5 705 aa13.66□□□□□ -0.22
SIM1-203ENST00000505753 SLAIN2Q9P270 581 aa13.66□□□□□ -0.22
SIM1-203ENST00000505753 KDM2AQ9Y2K7 1162 aa13.65□□□□□ -0.22
SIM1-203ENST00000505753 PIP4K2BP78356 416 aa13.63□□□□□ -0.23
SIM1-203ENST00000505753 PCGF6Q9BYE7 350 aa13.63□□□□□ -0.23
SIM1-203ENST00000505753 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.63□□□□□ -0.23
SIM1-203ENST00000505753 KNDC1Q76NI1 1749 aa13.62□□□□□ -0.23
SIM1-203ENST00000505753 DLC1Q96QB1 1528 aa13.62□□□□□ -0.23
SIM1-203ENST00000505753 CLSPNQ9HAW4 1339 aa13.62□□□□□ -0.23
SIM1-203ENST00000505753 ATF3P18847 181 aa13.61□□□□□ -0.23
SIM1-203ENST00000505753 MST1RQ04912 1400 aa13.61□□□□□ -0.23
SIM1-203ENST00000505753 HSPA1LP34931 641 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms