RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 PLEKHG1Q9ULL1 1385 aa21.32■■□□□ 1
PDLIM7-211ENST00000504318 CHD2O14647 1828 aaKnown RBP21.29■■□□□ 1
PDLIM7-211ENST00000504318 CLTCL1P53675 1640 aa21.29■■□□□ 1
PDLIM7-211ENST00000504318 TRPM2O94759 1503 aa21.28■■□□□ 1
PDLIM7-211ENST00000504318 ADAMTS13Q76LX8 1427 aa21.28■■□□□ 1
PDLIM7-211ENST00000504318 SLC26A8Q96RN1 970 aa21.27■■□□□ 1
PDLIM7-211ENST00000504318 TOM1O60784 492 aa21.26■□□□□ 0.99
PDLIM7-211ENST00000504318 KCNA6P17658 529 aa21.26■□□□□ 0.99
PDLIM7-211ENST00000504318 NKTRP30414 1462 aaKnown RBP21.26■□□□□ 0.99
PDLIM7-211ENST00000504318 NRXN3Q9Y4C0 1643 aa21.26■□□□□ 0.99
PDLIM7-211ENST00000504318 DIP2AQ14689 1571 aa21.23■□□□□ 0.99
PDLIM7-211ENST00000504318 HSPA1LP34931 641 aa21.22■□□□□ 0.99
PDLIM7-211ENST00000504318 TMEM94Q12767 1356 aa21.22■□□□□ 0.99
PDLIM7-211ENST00000504318 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
PDLIM7-211ENST00000504318 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
PDLIM7-211ENST00000504318 SETBP1Q9Y6X0 1596 aa21.19■□□□□ 0.98
PDLIM7-211ENST00000504318 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.19■□□□□ 0.98
PDLIM7-211ENST00000504318 TBX22Q9Y458 520 aa21.19■□□□□ 0.98
PDLIM7-211ENST00000504318 CHGAP10645 457 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-211ENST00000504318 NUTM2DQ5VT03 806 aaPredicted RBP21.17■□□□□ 0.98
PDLIM7-211ENST00000504318 KIF1BO60333 1816 aa21.16■□□□□ 0.98
PDLIM7-211ENST00000504318 PTPRUQ92729 1446 aa21.16■□□□□ 0.98
PDLIM7-211ENST00000504318 HDGFP51858 240 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-211ENST00000504318 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
PDLIM7-211ENST00000504318 PIK3R4Q99570 1358 aa21.14■□□□□ 0.98
PDLIM7-211ENST00000504318 PPP1R15AO75807 674 aaPredicted RBP21.14■□□□□ 0.97
PDLIM7-211ENST00000504318 XRN1Q8IZH2 1706 aaKnown RBP21.14■□□□□ 0.97
PDLIM7-211ENST00000504318 DISP3Q9P2K9 1392 aa21.13■□□□□ 0.97
PDLIM7-211ENST00000504318 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-211ENST00000504318 RBM33Q96EV2 1170 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-211ENST00000504318 SETD1AO15047 1707 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-211ENST00000504318 FAM135BQ49AJ0 1406 aa21.12■□□□□ 0.97
PDLIM7-211ENST00000504318 PROSER2Q86WR7 435 aaPredicted RBP21.11■□□□□ 0.97
PDLIM7-211ENST00000504318 MED1Q15648 1581 aaPredicted RBP21.1■□□□□ 0.97
PDLIM7-211ENST00000504318 ILDR2Q71H61 639 aa21.1■□□□□ 0.97
PDLIM7-211ENST00000504318 NCOA3Q9Y6Q9 1424 aa21.1■□□□□ 0.97
PDLIM7-211ENST00000504318 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
PDLIM7-211ENST00000504318 TRIM52Q96A61 297 aa21.08■□□□□ 0.97
PDLIM7-211ENST00000504318 BCANQ96GW7 911 aa21.08■□□□□ 0.97
PDLIM7-211ENST00000504318 SLC4A1APQ9BWU0 796 aaKnown RBP21.08■□□□□ 0.97
PDLIM7-211ENST00000504318 PPLO60437 1756 aa21.08■□□□□ 0.96
PDLIM7-211ENST00000504318 METP08581 1390 aa21.06■□□□□ 0.96
PDLIM7-211ENST00000504318 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.06■□□□□ 0.96
PDLIM7-211ENST00000504318 FOXD1Q16676 465 aa21.04■□□□□ 0.96
PDLIM7-211ENST00000504318 MSH6P52701 1360 aa21.02■□□□□ 0.96
PDLIM7-211ENST00000504318 ZNF326Q5BKZ1 582 aaKnown RBP21.02■□□□□ 0.96
PDLIM7-211ENST00000504318 AMOTL2Q9Y2J4 779 aa21.02■□□□□ 0.96
PDLIM7-211ENST00000504318 SPATA31E1Q6ZUB1 1445 aa21.02■□□□□ 0.96
PDLIM7-211ENST00000504318 SETD5Q9C0A6 1442 aa21.02■□□□□ 0.96
PDLIM7-211ENST00000504318 IFT172Q9UG01 1749 aa21.01■□□□□ 0.95
PDLIM7-211ENST00000504318 MPHOSPH9Q99550 1183 aa21.01■□□□□ 0.95
PDLIM7-211ENST00000504318 PRAG1Q86YV5 1406 aa20.99■□□□□ 0.95
PDLIM7-211ENST00000504318 RPGRIP1LQ68CZ1 1315 aa20.98■□□□□ 0.95
PDLIM7-211ENST00000504318 SLAIN2Q9P270 581 aa20.96■□□□□ 0.95
PDLIM7-211ENST00000504318 RAB3GAP2Q9H2M9 1393 aa20.96■□□□□ 0.95
PDLIM7-211ENST00000504318 DCCP43146 1447 aa20.95■□□□□ 0.95
PDLIM7-211ENST00000504318 NALCNQ8IZF0 1738 aa20.95■□□□□ 0.94
PDLIM7-211ENST00000504318 COL16A1Q07092 1604 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-211ENST00000504318 CCDC144AA2RUR9 1427 aa20.95■□□□□ 0.94
PDLIM7-211ENST00000504318 C19orf44Q9H6X5 657 aa20.94■□□□□ 0.94
PDLIM7-211ENST00000504318 PHLPP1O60346 1717 aa20.93■□□□□ 0.94
PDLIM7-211ENST00000504318 PTCH1Q13635 1447 aa20.93■□□□□ 0.94
PDLIM7-211ENST00000504318 VGFO15240 615 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-211ENST00000504318 AHDC1Q5TGY3 1603 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-211ENST00000504318 ASXL1Q8IXJ9 1541 aa20.9■□□□□ 0.94
PDLIM7-211ENST00000504318 MST1RQ04912 1400 aa20.9■□□□□ 0.94
PDLIM7-211ENST00000504318 ADGRL3Q9HAR2 1447 aa20.9■□□□□ 0.94
PDLIM7-211ENST00000504318 ROBO2Q9HCK4 1378 aa20.89■□□□□ 0.93
PDLIM7-211ENST00000504318 ADGRF5Q8IZF2 1346 aa20.89■□□□□ 0.93
PDLIM7-211ENST00000504318 ACIN1Q9UKV3 1341 aaKnown RBP20.89■□□□□ 0.93
PDLIM7-211ENST00000504318 CADPS2Q86UW7 1296 aa20.89■□□□□ 0.93
PDLIM7-211ENST00000504318 NRXN1Q9ULB1 1477 aa20.87■□□□□ 0.93
PDLIM7-211ENST00000504318 PIK3C2GO75747 1445 aa20.87■□□□□ 0.93
PDLIM7-211ENST00000504318 RGS17Q9UGC6 210 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-211ENST00000504318 NHSL1Q5SYE7 1610 aa20.85■□□□□ 0.93
PDLIM7-211ENST00000504318 ANKRD30BQ9BXX2 1392 aa20.85■□□□□ 0.93
PDLIM7-211ENST00000504318 SOCS7O14512 581 aa20.84■□□□□ 0.93
PDLIM7-211ENST00000504318 BRINP3Q76B58 766 aa20.84■□□□□ 0.93
PDLIM7-211ENST00000504318 ATF3P18847 181 aa20.83■□□□□ 0.93
PDLIM7-211ENST00000504318 C14orf37Q86TY3 774 aa20.83■□□□□ 0.93
PDLIM7-211ENST00000504318 TECPR2O15040 1411 aa20.83■□□□□ 0.93
PDLIM7-211ENST00000504318 KNDC1Q76NI1 1749 aa20.82■□□□□ 0.92
PDLIM7-211ENST00000504318 LAMC1P11047 1609 aa20.82■□□□□ 0.92
PDLIM7-211ENST00000504318 MYOM2P54296 1465 aa20.81■□□□□ 0.92
PDLIM7-211ENST00000504318 SHPRHQ149N8 1683 aa20.81■□□□□ 0.92
PDLIM7-211ENST00000504318 HRCP23327 699 aa20.81■□□□□ 0.92
PDLIM7-211ENST00000504318 RGL3Q3MIN7 710 aa20.81■□□□□ 0.92
PDLIM7-211ENST00000504318 JCADQ9P266 1359 aa20.8■□□□□ 0.92
PDLIM7-211ENST00000504318 LRP6O75581 1613 aa20.78■□□□□ 0.92
PDLIM7-211ENST00000504318 C1orf167Q5SNV9 1468 aa20.78■□□□□ 0.92
PDLIM7-211ENST00000504318 CDC42BPGQ6DT37 1551 aa20.76■□□□□ 0.91
PDLIM7-211ENST00000504318 LRPPRCP42704 1394 aaKnown RBP20.76■□□□□ 0.91
PDLIM7-211ENST00000504318 ABCC11Q96J66 1382 aa20.75■□□□□ 0.91
PDLIM7-211ENST00000504318 YTHDC2Q9H6S0 1430 aaKnown RBP20.72■□□□□ 0.91
PDLIM7-211ENST00000504318 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
PDLIM7-211ENST00000504318 C14orf93Q9H972 538 aaKnown RBP20.72■□□□□ 0.91
PDLIM7-211ENST00000504318 PLEKHH1Q9ULM0 1364 aa20.72■□□□□ 0.91
PDLIM7-211ENST00000504318 TMEM132EQ6IEE7 984 aa20.71■□□□□ 0.91
PDLIM7-211ENST00000504318 ADGRB1O14514 1584 aa20.71■□□□□ 0.91
PDLIM7-211ENST00000504318 DDX17Q92841 729 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms