RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SKOR2Q2VWA4 1001 aaPredicted RBP20.38■□□□□ 0.85
PCDHA1-203ENST00000504120 RASSF8Q8NHQ8 419 aa20.38■□□□□ 0.85
PCDHA1-203ENST00000504120 SF3A1Q15459 793 aaKnown RBP20.37■□□□□ 0.85
PCDHA1-203ENST00000504120 TOMM22Q9NS69 142 aa20.37■□□□□ 0.85
PCDHA1-203ENST00000504120 API5Q9BZZ5 524 aaKnown RBP20.36■□□□□ 0.85
PCDHA1-203ENST00000504120 PEG3Q9GZU2 1588 aa20.36■□□□□ 0.85
PCDHA1-203ENST00000504120 GTF2E1P29083 439 aaPredicted RBP20.35■□□□□ 0.85
PCDHA1-203ENST00000504120 CCDC7Q96M83 1385 aa20.35■□□□□ 0.85
PCDHA1-203ENST00000504120 FRAT2O75474 233 aaPredicted RBP20.35■□□□□ 0.85
PCDHA1-203ENST00000504120 DZIP1LQ8IYY4 767 aaKnown RBP20.34■□□□□ 0.85
PCDHA1-203ENST00000504120 H3BQV1 296 aa20.34■□□□□ 0.85
PCDHA1-203ENST00000504120 IFFO2Q5TF58 517 aa20.34■□□□□ 0.85
PCDHA1-203ENST00000504120 REC8O95072 547 aa20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 NEXNQ0ZGT2 675 aa20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 RUNDC1Q96C34 613 aa20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 FOXD4L5Q5VV16 416 aaPredicted RBP20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 FOXD4L4Q8WXT5 416 aaPredicted RBP20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 DDX49Q9Y6V7 483 aaKnown RBP20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 RIPK4P57078 832 aa20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 RUFY2Q8WXA3 655 aa20.33■□□□□ 0.84
PCDHA1-203ENST00000504120 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 LRRFIP1Q32MZ4 808 aaKnown RBP20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 DIAPH3Q9NSV4 1193 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 G3V3G9 751 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 DCAF8Q5TAQ9 597 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 NOC3LQ8WTT2 800 aaKnown RBP20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 ROCK1Q13464 1354 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 MIA2Q96PC5 1412 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 FAM184AQ8NB25 1140 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 KIF7Q2M1P5 1343 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
PCDHA1-203ENST00000504120 EHBP1L1Q8N3D4 1523 aa20.31■□□□□ 0.84
PCDHA1-203ENST00000504120 ZNF644Q9H582 1327 aaPredicted RBP20.3■□□□□ 0.84
PCDHA1-203ENST00000504120 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
PCDHA1-203ENST00000504120 FANCIQ9NVI1 1328 aa20.3■□□□□ 0.84
PCDHA1-203ENST00000504120 TTC5Q8N0Z6 440 aa20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 ANKRD50Q9ULJ7 1429 aa20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 C9orf78Q9NZ63 289 aaPredicted RBP20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 AAMPQ13685 434 aa20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 CNTLNQ9NXG0 1405 aa20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 GSE1Q14687 1217 aa20.28■□□□□ 0.84
PCDHA1-203ENST00000504120 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.84
PCDHA1-203ENST00000504120 ZKSCAN1P17029 563 aaPredicted RBP20.27■□□□□ 0.84
PCDHA1-203ENST00000504120 EIF2S2P20042 333 aaKnown RBP20.26■□□□□ 0.83
PCDHA1-203ENST00000504120 GNAI1P63096 354 aa20.26■□□□□ 0.83
PCDHA1-203ENST00000504120 TPM3P06753 285 aa20.26■□□□□ 0.83
PCDHA1-203ENST00000504120 CYB5RLQ6IPT4 315 aa20.26■□□□□ 0.83
PCDHA1-203ENST00000504120 DDX58O95786 925 aaKnown RBP20.25■□□□□ 0.83
PCDHA1-203ENST00000504120 CREBRFQ8IUR6 639 aa20.25■□□□□ 0.83
PCDHA1-203ENST00000504120 MARCH6O60337 910 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 AKAP17AQ02040 695 aaKnown RBP20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 CPLX2Q6PUV4 134 aaKnown RBP20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 HECW1Q76N89 1606 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 GOLGA6L1Q8N7Z2 621 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 ARID3AQ99856 593 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 GOLGA6L19H0YKK7 550 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 SYNE3Q6ZMZ3 975 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 EVA1CP58658 441 aa20.23■□□□□ 0.83
PCDHA1-203ENST00000504120 BRD4O60885 1362 aaPredicted RBP20.22■□□□□ 0.83
PCDHA1-203ENST00000504120 CHMP5Q9NZZ3 219 aa20.22■□□□□ 0.83
PCDHA1-203ENST00000504120 BECN2A8MW95 431 aa20.21■□□□□ 0.83
PCDHA1-203ENST00000504120 FKBP5Q13451 457 aaPredicted RBP20.21■□□□□ 0.83
PCDHA1-203ENST00000504120 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
PCDHA1-203ENST00000504120 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
PCDHA1-203ENST00000504120 TPD52L1Q16890 204 aaPredicted RBP20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 RNF20Q5VTR2 975 aa20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 PSME1Q06323 249 aa20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 INTS3Q68E01 1043 aaKnown RBP20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 ARHGAP5Q13017 1502 aa20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 G3BP1Q13283 466 aaKnown RBP eCLIP20.18■□□□□ 0.82
PCDHA1-203ENST00000504120 ANO2Q9NQ90 1003 aa20.18■□□□□ 0.82
PCDHA1-203ENST00000504120 MCTP1Q6DN14 999 aa20.18■□□□□ 0.82
PCDHA1-203ENST00000504120 CUL7Q14999 1698 aa20.18■□□□□ 0.82
PCDHA1-203ENST00000504120 NCBP3Q53F19 620 aaKnown RBP20.18■□□□□ 0.82
PCDHA1-203ENST00000504120 PLEKHH2Q8IVE3 1493 aa20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 FOXD4L6Q3SYB3 417 aaPredicted RBP20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 FOXD4L3Q6VB84 417 aaPredicted RBP20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 TSPYL4Q9UJ04 414 aa20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 TSR1Q2NL82 804 aaKnown RBP20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
PCDHA1-203ENST00000504120 TRIM29Q14134 588 aa20.16■□□□□ 0.82
PCDHA1-203ENST00000504120 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.15■□□□□ 0.82
PCDHA1-203ENST00000504120 VPS53Q5VIR6 699 aa20.15■□□□□ 0.82
PCDHA1-203ENST00000504120 TPM1P09493 284 aa20.15■□□□□ 0.82
PCDHA1-203ENST00000504120 CEP89Q96ST8 783 aa20.15■□□□□ 0.82
PCDHA1-203ENST00000504120 WASHC2AQ641Q2 1341 aa20.14■□□□□ 0.82
PCDHA1-203ENST00000504120 PES1O00541 588 aaKnown RBP20.14■□□□□ 0.81
PCDHA1-203ENST00000504120 AMOTL1Q8IY63 956 aa20.14■□□□□ 0.81
PCDHA1-203ENST00000504120 NUCB2P80303 420 aa20.14■□□□□ 0.81
PCDHA1-203ENST00000504120 GGNBP2Q9H3C7 697 aa20.14■□□□□ 0.81
PCDHA1-203ENST00000504120 CPLX1O14810 134 aa20.13■□□□□ 0.81
PCDHA1-203ENST00000504120 ERC2O15083 957 aa20.13■□□□□ 0.81
PCDHA1-203ENST00000504120 RSPH6AQ9H0K4 717 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms