RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 SKOR2Q2VWA4 1001 aaPredicted RBP20.38■□□□□ 0.85
PCDHA1-203ENST00000504120 RASSF8Q8NHQ8 419 aa20.38■□□□□ 0.85
PCDHA1-203ENST00000504120 SF3A1Q15459 793 aaKnown RBP20.37■□□□□ 0.85
PCDHA1-203ENST00000504120 TOMM22Q9NS69 142 aa20.37■□□□□ 0.85
PCDHA1-203ENST00000504120 API5Q9BZZ5 524 aaKnown RBP20.36■□□□□ 0.85
PCDHA1-203ENST00000504120 PEG3Q9GZU2 1588 aa20.36■□□□□ 0.85
PCDHA1-203ENST00000504120 GTF2E1P29083 439 aaPredicted RBP20.35■□□□□ 0.85
PCDHA1-203ENST00000504120 CCDC7Q96M83 1385 aa20.35■□□□□ 0.85
PCDHA1-203ENST00000504120 FRAT2O75474 233 aaPredicted RBP20.35■□□□□ 0.85
PCDHA1-203ENST00000504120 DZIP1LQ8IYY4 767 aaKnown RBP20.34■□□□□ 0.85
PCDHA1-203ENST00000504120 H3BQV1 296 aa20.34■□□□□ 0.85
PCDHA1-203ENST00000504120 IFFO2Q5TF58 517 aa20.34■□□□□ 0.85
PCDHA1-203ENST00000504120 REC8O95072 547 aa20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 NEXNQ0ZGT2 675 aa20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 RUNDC1Q96C34 613 aa20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 FOXD4L5Q5VV16 416 aaPredicted RBP20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 FOXD4L4Q8WXT5 416 aaPredicted RBP20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 DDX49Q9Y6V7 483 aaKnown RBP20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 RIPK4P57078 832 aa20.33■□□□□ 0.85
PCDHA1-203ENST00000504120 RUFY2Q8WXA3 655 aa20.33■□□□□ 0.84
PCDHA1-203ENST00000504120 SYNJ2O15056 1496 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 LRRFIP1Q32MZ4 808 aaKnown RBP20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 DIAPH3Q9NSV4 1193 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 G3V3G9 751 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 DCAF8Q5TAQ9 597 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 NOC3LQ8WTT2 800 aaKnown RBP20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 ROCK1Q13464 1354 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 MIA2Q96PC5 1412 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 FAM184AQ8NB25 1140 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 KIF7Q2M1P5 1343 aa20.32■□□□□ 0.84
PCDHA1-203ENST00000504120 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
PCDHA1-203ENST00000504120 EHBP1L1Q8N3D4 1523 aa20.31■□□□□ 0.84
PCDHA1-203ENST00000504120 ZNF644Q9H582 1327 aaPredicted RBP20.3■□□□□ 0.84
PCDHA1-203ENST00000504120 ABCA10Q8WWZ4 1543 aa20.3■□□□□ 0.84
PCDHA1-203ENST00000504120 FANCIQ9NVI1 1328 aa20.3■□□□□ 0.84
PCDHA1-203ENST00000504120 TTC5Q8N0Z6 440 aa20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 ANKRD50Q9ULJ7 1429 aa20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 SLC4A3P48751 1232 aa20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 C9orf78Q9NZ63 289 aaPredicted RBP20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 AAMPQ13685 434 aa20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 CNTLNQ9NXG0 1405 aa20.29■□□□□ 0.84
PCDHA1-203ENST00000504120 GSE1Q14687 1217 aa20.28■□□□□ 0.84
PCDHA1-203ENST00000504120 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.84
PCDHA1-203ENST00000504120 ZKSCAN1P17029 563 aaPredicted RBP20.27■□□□□ 0.84
PCDHA1-203ENST00000504120 EIF2S2P20042 333 aaKnown RBP20.26■□□□□ 0.83
PCDHA1-203ENST00000504120 GNAI1P63096 354 aa20.26■□□□□ 0.83
PCDHA1-203ENST00000504120 TPM3P06753 285 aa20.26■□□□□ 0.83
PCDHA1-203ENST00000504120 CYB5RLQ6IPT4 315 aa20.26■□□□□ 0.83
PCDHA1-203ENST00000504120 DDX58O95786 925 aaKnown RBP20.25■□□□□ 0.83
PCDHA1-203ENST00000504120 CREBRFQ8IUR6 639 aa20.25■□□□□ 0.83
PCDHA1-203ENST00000504120 MARCH6O60337 910 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 AKAP17AQ02040 695 aaKnown RBP20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 CPLX2Q6PUV4 134 aaKnown RBP20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 TIAM1Q13009 1591 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 HECW1Q76N89 1606 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 GOLGA6L1Q8N7Z2 621 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 ARID3AQ99856 593 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 SNAPC4Q5SXM2 1469 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 GOLGA6L19H0YKK7 550 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 SYNE3Q6ZMZ3 975 aa20.24■□□□□ 0.83
PCDHA1-203ENST00000504120 EVA1CP58658 441 aa20.23■□□□□ 0.83
PCDHA1-203ENST00000504120 BRD4O60885 1362 aaPredicted RBP20.22■□□□□ 0.83
PCDHA1-203ENST00000504120 CHMP5Q9NZZ3 219 aa20.22■□□□□ 0.83
PCDHA1-203ENST00000504120 BECN2A8MW95 431 aa20.21■□□□□ 0.83
PCDHA1-203ENST00000504120 FKBP5Q13451 457 aaPredicted RBP20.21■□□□□ 0.83
PCDHA1-203ENST00000504120 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
PCDHA1-203ENST00000504120 HSP90AB4PQ58FF6 505 aa20.2■□□□□ 0.82
PCDHA1-203ENST00000504120 TPD52L1Q16890 204 aaPredicted RBP20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 RNF20Q5VTR2 975 aa20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 PSME1Q06323 249 aa20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 INTS3Q68E01 1043 aaKnown RBP20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 ARHGAP5Q13017 1502 aa20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 KIAA0586Q9BVV6 1533 aa20.19■□□□□ 0.82
PCDHA1-203ENST00000504120 G3BP1Q13283 466 aaKnown RBP eCLIP20.18■□□□□ 0.82
PCDHA1-203ENST00000504120 ANO2Q9NQ90 1003 aa20.18■□□□□ 0.82
PCDHA1-203ENST00000504120 MCTP1Q6DN14 999 aa20.18■□□□□ 0.82
PCDHA1-203ENST00000504120 CUL7Q14999 1698 aa20.18■□□□□ 0.82
PCDHA1-203ENST00000504120 NCBP3Q53F19 620 aaKnown RBP20.18■□□□□ 0.82
PCDHA1-203ENST00000504120 PLEKHH2Q8IVE3 1493 aa20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 FOXD4L6Q3SYB3 417 aaPredicted RBP20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 FOXD4L3Q6VB84 417 aaPredicted RBP20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 TSPYL4Q9UJ04 414 aa20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 TSR1Q2NL82 804 aaKnown RBP20.17■□□□□ 0.82
PCDHA1-203ENST00000504120 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
PCDHA1-203ENST00000504120 TRIM29Q14134 588 aa20.16■□□□□ 0.82
PCDHA1-203ENST00000504120 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.15■□□□□ 0.82
PCDHA1-203ENST00000504120 VPS53Q5VIR6 699 aa20.15■□□□□ 0.82
PCDHA1-203ENST00000504120 TPM1P09493 284 aa20.15■□□□□ 0.82
PCDHA1-203ENST00000504120 CEP89Q96ST8 783 aa20.15■□□□□ 0.82
PCDHA1-203ENST00000504120 WASHC2AQ641Q2 1341 aa20.14■□□□□ 0.82
PCDHA1-203ENST00000504120 PES1O00541 588 aaKnown RBP20.14■□□□□ 0.81
PCDHA1-203ENST00000504120 AMOTL1Q8IY63 956 aa20.14■□□□□ 0.81
PCDHA1-203ENST00000504120 NUCB2P80303 420 aa20.14■□□□□ 0.81
PCDHA1-203ENST00000504120 GGNBP2Q9H3C7 697 aa20.14■□□□□ 0.81
PCDHA1-203ENST00000504120 CPLX1O14810 134 aa20.13■□□□□ 0.81
PCDHA1-203ENST00000504120 ERC2O15083 957 aa20.13■□□□□ 0.81
PCDHA1-203ENST00000504120 RSPH6AQ9H0K4 717 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms