RNA–Protein interactions for RNA: ENST00000504091.1

SH3TC2-204, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 4,522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-204ENST00000504091 ARHGEF40Q8TER5 1519 aa8.83□□□□□ -1
SH3TC2-204ENST00000504091 FAM69CQ0P6D2 419 aa8.82□□□□□ -1
SH3TC2-204ENST00000504091 RALBP1Q15311 655 aa8.82□□□□□ -1
SH3TC2-204ENST00000504091 WDR43Q15061 677 aaKnown RBP eCLIP8.82□□□□□ -1
SH3TC2-204ENST00000504091 KCTD17Q8N5Z5 321 aa8.82□□□□□ -1
SH3TC2-204ENST00000504091 TTC37Q6PGP7 1564 aa8.82□□□□□ -1
SH3TC2-204ENST00000504091 SAMD1Q6SPF0 538 aaPredicted RBP8.82□□□□□ -1
SH3TC2-204ENST00000504091 GOLGA6L22H0YM25 854 aa8.81□□□□□ -1
SH3TC2-204ENST00000504091 MAP7D2Q96T17 732 aa8.81□□□□□ -1
SH3TC2-204ENST00000504091 CTTNBP2Q8WZ74 1663 aa8.81□□□□□ -1
SH3TC2-204ENST00000504091 XRCC6P12956 609 aaKnown RBP eCLIP8.81□□□□□ -1
SH3TC2-204ENST00000504091 LMOD2Q6P5Q4 547 aa8.81□□□□□ -1
SH3TC2-204ENST00000504091 KIAA1211Q6ZU35 1233 aa8.81□□□□□ -1
SH3TC2-204ENST00000504091 MPHOSPH9Q99550 1183 aa8.81□□□□□ -1
SH3TC2-204ENST00000504091 MAGI2Q86UL8 1455 aa8.81□□□□□ -1
SH3TC2-204ENST00000504091 SLC24A3Q9HC58 644 aa8.81□□□□□ -1
SH3TC2-204ENST00000504091 PDIA4P13667 645 aaKnown RBP8.8□□□□□ -1
SH3TC2-204ENST00000504091 CDCA7LQ96GN5 454 aa8.8□□□□□ -1
SH3TC2-204ENST00000504091 GPBP1L1Q9HC44 474 aaPredicted RBP8.8□□□□□ -1
SH3TC2-204ENST00000504091 MYBBP1AQ9BQG0 1328 aaKnown RBP8.8□□□□□ -1
SH3TC2-204ENST00000504091 PREX1Q8TCU6 1659 aa8.8□□□□□ -1
SH3TC2-204ENST00000504091 TRAK2O60296 914 aa8.8□□□□□ -1
SH3TC2-204ENST00000504091 CARD11Q9BXL7 1154 aa8.8□□□□□ -1
SH3TC2-204ENST00000504091 PTPRGP23470 1445 aa8.79□□□□□ -1
SH3TC2-204ENST00000504091 LRRC9Q6ZRR7 1453 aa8.79□□□□□ -1
SH3TC2-204ENST00000504091 SPDYE4A6NLX3 237 aa8.79□□□□□ -1
SH3TC2-204ENST00000504091 PDE4CQ08493 712 aa8.79□□□□□ -1
SH3TC2-204ENST00000504091 DNTTIP2Q5QJE6 756 aaKnown RBP8.79□□□□□ -1
SH3TC2-204ENST00000504091 NLRP13Q86W25 1043 aa8.79□□□□□ -1
SH3TC2-204ENST00000504091 PANK2Q9BZ23 570 aa8.79□□□□□ -1
SH3TC2-204ENST00000504091 DDX11L8A8MPP1 907 aa8.79□□□□□ -1
SH3TC2-204ENST00000504091 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.79□□□□□ -1
SH3TC2-204ENST00000504091 HSCBQ8IWL3 235 aa8.79□□□□□ -1
SH3TC2-204ENST00000504091 MYCNP04198 464 aaPredicted RBP8.78□□□□□ -1
SH3TC2-204ENST00000504091 GRPEL1Q9HAV7 217 aa8.78□□□□□ -1
SH3TC2-204ENST00000504091 KIF15Q9NS87 1388 aa8.78□□□□□ -1
SH3TC2-204ENST00000504091 CALD1Q05682 793 aaKnown RBP8.77□□□□□ -1.01
SH3TC2-204ENST00000504091 GBP4Q96PP9 640 aa8.77□□□□□ -1.01
SH3TC2-204ENST00000504091 CHMP5Q9NZZ3 219 aa8.77□□□□□ -1.01
SH3TC2-204ENST00000504091 MCM4P33991 863 aa8.77□□□□□ -1.01
SH3TC2-204ENST00000504091 CC2D1BQ5T0F9 858 aaKnown RBP8.77□□□□□ -1.01
SH3TC2-204ENST00000504091 DISP1Q96F81 1524 aa8.77□□□□□ -1.01
SH3TC2-204ENST00000504091 R3HCC1Q9Y3T6 440 aaKnown RBP8.77□□□□□ -1.01
SH3TC2-204ENST00000504091 SPATA31D1Q6ZQQ2 1576 aa8.76□□□□□ -1.01
SH3TC2-204ENST00000504091 EFCAB5A4FU69 1503 aa8.76□□□□□ -1.01
SH3TC2-204ENST00000504091 NCOA1Q15788 1441 aa8.76□□□□□ -1.01
SH3TC2-204ENST00000504091 MTMR7Q9Y216 660 aa8.76□□□□□ -1.01
SH3TC2-204ENST00000504091 ROCK2O75116 1388 aaKnown RBP8.76□□□□□ -1.01
SH3TC2-204ENST00000504091 PTMAP06454 111 aaKnown RBP8.76□□□□□ -1.01
SH3TC2-204ENST00000504091 PTPRMP28827 1452 aa8.76□□□□□ -1.01
SH3TC2-204ENST00000504091 HSP90AB1P08238 724 aaKnown RBP8.75□□□□□ -1.01
SH3TC2-204ENST00000504091 MAPK8IP3Q9UPT6 1336 aa8.75□□□□□ -1.01
SH3TC2-204ENST00000504091 MTERF4Q7Z6M4 381 aaKnown RBP8.75□□□□□ -1.01
SH3TC2-204ENST00000504091 PTPRTO14522 1441 aa8.75□□□□□ -1.01
SH3TC2-204ENST00000504091 ISY1Q9ULR0 285 aaKnown RBP8.75□□□□□ -1.01
SH3TC2-204ENST00000504091 PRXQ9BXM0 1461 aa8.74□□□□□ -1.01
SH3TC2-204ENST00000504091 C8orf34Q49A92 452 aa8.74□□□□□ -1.01
SH3TC2-204ENST00000504091 BRD4O60885 1362 aaPredicted RBP8.74□□□□□ -1.01
SH3TC2-204ENST00000504091 LMTK3Q96Q04 1460 aa8.74□□□□□ -1.01
SH3TC2-204ENST00000504091 NBPF8Q3BBV2 869 aa8.74□□□□□ -1.01
SH3TC2-204ENST00000504091 FRMPD1Q5SYB0 1578 aa8.74□□□□□ -1.01
SH3TC2-204ENST00000504091 PTMSP20962 102 aa8.73□□□□□ -1.01
SH3TC2-204ENST00000504091 ZHX1Q9UKY1 873 aaPredicted RBP8.73□□□□□ -1.01
SH3TC2-204ENST00000504091 RICTORQ6R327 1708 aa8.73□□□□□ -1.01
SH3TC2-204ENST00000504091 USP47Q96K76 1375 aa8.73□□□□□ -1.01
SH3TC2-204ENST00000504091 TIAM1Q13009 1591 aa8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 NCOA2Q15596 1464 aa8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 GOLGA2Q08379 1002 aa8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 SKOR2Q2VWA4 1001 aaPredicted RBP8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 C20orf194Q5TEA3 1177 aa8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 FAM135AQ9P2D6 1515 aa8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 MAP3K1Q13233 1512 aa8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 MFAP1P55081 439 aaKnown RBP8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 FGD6Q6ZV73 1430 aa8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 COL17A1Q9UMD9 1497 aaPredicted RBP8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 AAMPQ13685 434 aa8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 PRDM10Q9NQV6 1147 aa8.72□□□□□ -1.01
SH3TC2-204ENST00000504091 FANCAO15360 1455 aa8.71□□□□□ -1.01
SH3TC2-204ENST00000504091 MROH2AA6NES4 1674 aa8.71□□□□□ -1.01
SH3TC2-204ENST00000504091 CARMIL1Q5VZK9 1371 aa8.71□□□□□ -1.01
SH3TC2-204ENST00000504091 FHOD3Q2V2M9 1422 aa8.71□□□□□ -1.01
SH3TC2-204ENST00000504091 POGZQ7Z3K3 1410 aa8.71□□□□□ -1.01
SH3TC2-204ENST00000504091 CIZ1Q9ULV3 898 aaPredicted RBP8.71□□□□□ -1.01
SH3TC2-204ENST00000504091 HFM1A2PYH4 1435 aa8.71□□□□□ -1.02
SH3TC2-204ENST00000504091 NASPP49321 788 aaPredicted RBP8.71□□□□□ -1.02
SH3TC2-204ENST00000504091 ZSCAN30Q86W11 494 aa8.71□□□□□ -1.02
SH3TC2-204ENST00000504091 SOCS7O14512 581 aa8.7□□□□□ -1.02
SH3TC2-204ENST00000504091 FGD1P98174 961 aa8.7□□□□□ -1.02
SH3TC2-204ENST00000504091 CCDC173Q0VFZ6 552 aa8.7□□□□□ -1.02
SH3TC2-204ENST00000504091 ARHGEF12Q9NZN5 1544 aa8.7□□□□□ -1.02
SH3TC2-204ENST00000504091 UQCRHLA0A096LP55 91 aa8.69□□□□□ -1.02
SH3TC2-204ENST00000504091 UQCRHP07919 91 aa8.69□□□□□ -1.02
SH3TC2-204ENST00000504091 IGF1RP08069 1367 aa8.69□□□□□ -1.02
SH3TC2-204ENST00000504091 CSPP1Q1MSJ5 1256 aa8.69□□□□□ -1.02
SH3TC2-204ENST00000504091 DDX49Q9Y6V7 483 aaKnown RBP8.69□□□□□ -1.02
SH3TC2-204ENST00000504091 MADDQ8WXG6 1647 aa8.69□□□□□ -1.02
SH3TC2-204ENST00000504091 ST20-MTHFSA0A0A6YYL1 179 aa8.68□□□□□ -1.02
SH3TC2-204ENST00000504091 PMFBP1Q8TBY8 1022 aa8.68□□□□□ -1.02
SH3TC2-204ENST00000504091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.68□□□□□ -1.02
SH3TC2-204ENST00000504091 TBC1D2Q9BYX2 928 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms