RNA–Protein interactions for RNA: ENST00000504044.1

NFKB1-204, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2

Gene NFKB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-204ENST00000504044 PLEKHG1Q9ULL1 1385 aa26.67■■□□□ 1.86
NFKB1-204ENST00000504044 ZFYVE9O95405 1425 aa26.66■■□□□ 1.86
NFKB1-204ENST00000504044 TOM1O60784 492 aa26.66■■□□□ 1.86
NFKB1-204ENST00000504044 ZNF326Q5BKZ1 582 aaKnown RBP26.65■■□□□ 1.86
NFKB1-204ENST00000504044 SPHKAPQ2M3C7 1700 aa26.65■■□□□ 1.86
NFKB1-204ENST00000504044 SETD5Q9C0A6 1442 aa26.65■■□□□ 1.86
NFKB1-204ENST00000504044 SLC26A8Q96RN1 970 aa26.63■■□□□ 1.85
NFKB1-204ENST00000504044 TRPM2O94759 1503 aa26.63■■□□□ 1.85
NFKB1-204ENST00000504044 KCNA6P17658 529 aa26.61■■□□□ 1.85
NFKB1-204ENST00000504044 MPHOSPH9Q99550 1183 aa26.57■■□□□ 1.84
NFKB1-204ENST00000504044 TBX22Q9Y458 520 aa26.57■■□□□ 1.84
NFKB1-204ENST00000504044 LRRC7Q96NW7 1537 aa26.56■■□□□ 1.84
NFKB1-204ENST00000504044 NUTM2DQ5VT03 806 aaPredicted RBP26.55■■□□□ 1.84
NFKB1-204ENST00000504044 SCAF1Q9H7N4 1312 aaKnown RBP26.54■■□□□ 1.84
NFKB1-204ENST00000504044 MYO5BQ9ULV0 1848 aa26.52■■□□□ 1.84
NFKB1-204ENST00000504044 CLTCL1P53675 1640 aa26.51■■□□□ 1.83
NFKB1-204ENST00000504044 DIP2AQ14689 1571 aa26.51■■□□□ 1.83
NFKB1-204ENST00000504044 CCDC144AA2RUR9 1427 aa26.51■■□□□ 1.83
NFKB1-204ENST00000504044 PIK3R4Q99570 1358 aa26.51■■□□□ 1.83
NFKB1-204ENST00000504044 RAB3GAP2Q9H2M9 1393 aa26.51■■□□□ 1.83
NFKB1-204ENST00000504044 PROSER2Q86WR7 435 aaPredicted RBP26.51■■□□□ 1.83
NFKB1-204ENST00000504044 SENP3Q9H4L4 574 aaPredicted RBP26.51■■□□□ 1.83
NFKB1-204ENST00000504044 NKTRP30414 1462 aaKnown RBP26.5■■□□□ 1.83
NFKB1-204ENST00000504044 RPGRIP1LQ68CZ1 1315 aa26.5■■□□□ 1.83
NFKB1-204ENST00000504044 VGFO15240 615 aaPredicted RBP26.49■■□□□ 1.83
NFKB1-204ENST00000504044 PIP4K2BP78356 416 aa26.49■■□□□ 1.83
NFKB1-204ENST00000504044 HRCP23327 699 aa26.47■■□□□ 1.83
NFKB1-204ENST00000504044 FOXD1Q16676 465 aa26.47■■□□□ 1.83
NFKB1-204ENST00000504044 TMEM94Q12767 1356 aa26.46■■□□□ 1.83
NFKB1-204ENST00000504044 KIF1BO60333 1816 aa26.45■■□□□ 1.82
NFKB1-204ENST00000504044 ADAMTS13Q76LX8 1427 aa26.45■■□□□ 1.82
NFKB1-204ENST00000504044 STRCP1A6NGW2 1772 aa26.45■■□□□ 1.82
NFKB1-204ENST00000504044 NWD1Q149M9 1564 aa26.45■■□□□ 1.82
NFKB1-204ENST00000504044 NEXMIFQ5QGS0 1516 aa26.4■■□□□ 1.82
NFKB1-204ENST00000504044 MSH6P52701 1360 aa26.4■■□□□ 1.82
NFKB1-204ENST00000504044 SETBP1Q9Y6X0 1596 aa26.4■■□□□ 1.82
NFKB1-204ENST00000504044 NCOA3Q9Y6Q9 1424 aa26.39■■□□□ 1.82
NFKB1-204ENST00000504044 C14orf37Q86TY3 774 aa26.38■■□□□ 1.81
NFKB1-204ENST00000504044 AMOTL2Q9Y2J4 779 aa26.37■■□□□ 1.81
NFKB1-204ENST00000504044 ANKRD30BQ9BXX2 1392 aa26.33■■□□□ 1.81
NFKB1-204ENST00000504044 RGL3Q3MIN7 710 aa26.33■■□□□ 1.81
NFKB1-204ENST00000504044 CHD2O14647 1828 aaKnown RBP26.32■■□□□ 1.8
NFKB1-204ENST00000504044 RBM33Q96EV2 1170 aaKnown RBP26.31■■□□□ 1.8
NFKB1-204ENST00000504044 HSPA1LP34931 641 aa26.29■■□□□ 1.8
NFKB1-204ENST00000504044 SPATA31E1Q6ZUB1 1445 aa26.29■■□□□ 1.8
NFKB1-204ENST00000504044 ATF3P18847 181 aa26.27■■□□□ 1.8
NFKB1-204ENST00000504044 CADPS2Q86UW7 1296 aa26.27■■□□□ 1.8
NFKB1-204ENST00000504044 C19orf44Q9H6X5 657 aa26.27■■□□□ 1.8
NFKB1-204ENST00000504044 METP08581 1390 aa26.27■■□□□ 1.8
NFKB1-204ENST00000504044 NRXN3Q9Y4C0 1643 aa26.27■■□□□ 1.8
NFKB1-204ENST00000504044 FAM135BQ49AJ0 1406 aa26.26■■□□□ 1.79
NFKB1-204ENST00000504044 PTPRUQ92729 1446 aa26.25■■□□□ 1.79
NFKB1-204ENST00000504044 ALKQ9UM73 1620 aa26.25■■□□□ 1.79
NFKB1-204ENST00000504044 XIRP1Q702N8 1843 aaKnown RBP26.23■■□□□ 1.79
NFKB1-204ENST00000504044 SLAIN2Q9P270 581 aa26.23■■□□□ 1.79
NFKB1-204ENST00000504044 PPLO60437 1756 aa26.21■■□□□ 1.79
NFKB1-204ENST00000504044 ADGRF5Q8IZF2 1346 aa26.19■■□□□ 1.78
NFKB1-204ENST00000504044 DCCP43146 1447 aa26.18■■□□□ 1.78
NFKB1-204ENST00000504044 XRN1Q8IZH2 1706 aaKnown RBP26.18■■□□□ 1.78
NFKB1-204ENST00000504044 PTCH1Q13635 1447 aa26.17■■□□□ 1.78
NFKB1-204ENST00000504044 DISP3Q9P2K9 1392 aa26.17■■□□□ 1.78
NFKB1-204ENST00000504044 STAC3Q96MF2 364 aa26.16■■□□□ 1.78
NFKB1-204ENST00000504044 PIK3C2GO75747 1445 aa26.13■■□□□ 1.77
NFKB1-204ENST00000504044 MYOM2P54296 1465 aa26.12■■□□□ 1.77
NFKB1-204ENST00000504044 PRAG1Q86YV5 1406 aa26.12■■□□□ 1.77
NFKB1-204ENST00000504044 ADGRL3Q9HAR2 1447 aa26.11■■□□□ 1.77
NFKB1-204ENST00000504044 ROBO1Q9Y6N7 1651 aa26.08■■□□□ 1.77
NFKB1-204ENST00000504044 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.08■■□□□ 1.76
NFKB1-204ENST00000504044 IFT172Q9UG01 1749 aa26.08■■□□□ 1.76
NFKB1-204ENST00000504044 C14orf93Q9H972 538 aaKnown RBP26.07■■□□□ 1.76
NFKB1-204ENST00000504044 LRPPRCP42704 1394 aaKnown RBP26.07■■□□□ 1.76
NFKB1-204ENST00000504044 ROBO2Q9HCK4 1378 aa26.07■■□□□ 1.76
NFKB1-204ENST00000504044 DCAF11Q8TEB1 546 aa26.06■■□□□ 1.76
NFKB1-204ENST00000504044 SETD1AO15047 1707 aaKnown RBP26.05■■□□□ 1.76
NFKB1-204ENST00000504044 STK26Q9P289 416 aa26.05■■□□□ 1.76
NFKB1-204ENST00000504044 DHX57Q6P158 1386 aaKnown RBP26.05■■□□□ 1.76
NFKB1-204ENST00000504044 NRXN1Q9ULB1 1477 aa26.04■■□□□ 1.76
NFKB1-204ENST00000504044 ABCC11Q96J66 1382 aa26.04■■□□□ 1.76
NFKB1-204ENST00000504044 KDM2AQ9Y2K7 1162 aa26.03■■□□□ 1.76
NFKB1-204ENST00000504044 TECPR2O15040 1411 aa26.03■■□□□ 1.76
NFKB1-204ENST00000504044 TRIM26Q12899 539 aaPredicted RBP26.02■■□□□ 1.76
NFKB1-204ENST00000504044 LAMC1P11047 1609 aa26.01■■□□□ 1.75
NFKB1-204ENST00000504044 TMEM132EQ6IEE7 984 aa26.01■■□□□ 1.75
NFKB1-204ENST00000504044 YTHDC2Q9H6S0 1430 aaKnown RBP26■■□□□ 1.75
NFKB1-204ENST00000504044 CFAP70Q5T0N1 1121 aa26■■□□□ 1.75
NFKB1-204ENST00000504044 PHF23Q9BUL5 403 aaPredicted RBP26■■□□□ 1.75
NFKB1-204ENST00000504044 MST1RQ04912 1400 aa25.99■■□□□ 1.75
NFKB1-204ENST00000504044 BRINP3Q76B58 766 aa25.99■■□□□ 1.75
NFKB1-204ENST00000504044 SIRT1Q96EB6 747 aa25.99■■□□□ 1.75
NFKB1-204ENST00000504044 JCADQ9P266 1359 aa25.96■■□□□ 1.75
NFKB1-204ENST00000504044 MED1Q15648 1581 aaPredicted RBP25.96■■□□□ 1.75
NFKB1-204ENST00000504044 PHLPP1O60346 1717 aa25.93■■□□□ 1.74
NFKB1-204ENST00000504044 NALCNQ8IZF0 1738 aa25.93■■□□□ 1.74
NFKB1-204ENST00000504044 C1orf167Q5SNV9 1468 aa25.92■■□□□ 1.74
NFKB1-204ENST00000504044 WAPLQ7Z5K2 1190 aa25.92■■□□□ 1.74
NFKB1-204ENST00000504044 ASXL1Q8IXJ9 1541 aa25.92■■□□□ 1.74
NFKB1-204ENST00000504044 AHDC1Q5TGY3 1603 aaPredicted RBP25.92■■□□□ 1.74
NFKB1-204ENST00000504044 POGKQ9P215 609 aa25.91■■□□□ 1.74
NFKB1-204ENST00000504044 KNDC1Q76NI1 1749 aa25.91■■□□□ 1.74
NFKB1-204ENST00000504044 CDC42BPGQ6DT37 1551 aa25.89■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms