RNA–Protein interactions for RNA: ENST00000502816.1

TRIO-204, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 736 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-204ENST00000502816 TRPM2O94759 1503 aa37.29■■■■□ 3.56
TRIO-204ENST00000502816 CHGAP10645 457 aaKnown RBP37.25■■■■□ 3.55
TRIO-204ENST00000502816 TRIM52Q96A61 297 aa37.25■■■■□ 3.55
TRIO-204ENST00000502816 SLC26A8Q96RN1 970 aa37.24■■■■□ 3.55
TRIO-204ENST00000502816 TOM1O60784 492 aa37.22■■■■□ 3.55
TRIO-204ENST00000502816 KCNA6P17658 529 aa37.22■■■■□ 3.55
TRIO-204ENST00000502816 XIRP1Q702N8 1843 aaKnown RBP37.22■■■■□ 3.55
TRIO-204ENST00000502816 CLTCL1P53675 1640 aa37.21■■■■□ 3.55
TRIO-204ENST00000502816 ALKQ9UM73 1620 aa37.2■■■■□ 3.55
TRIO-204ENST00000502816 NWD1Q149M9 1564 aa37.2■■■■□ 3.55
TRIO-204ENST00000502816 PPP1R15AO75807 674 aaPredicted RBP37.19■■■■□ 3.54
TRIO-204ENST00000502816 SLC4A1APQ9BWU0 796 aaKnown RBP37.19■■■■□ 3.54
TRIO-204ENST00000502816 TBX22Q9Y458 520 aa37.18■■■■□ 3.54
TRIO-204ENST00000502816 ACIN1Q9UKV3 1341 aaKnown RBP37.17■■■■□ 3.54
TRIO-204ENST00000502816 CHD2O14647 1828 aaKnown RBP37.16■■■■□ 3.54
TRIO-204ENST00000502816 KIF1BO60333 1816 aa37.15■■■■□ 3.54
TRIO-204ENST00000502816 ADAMTS13Q76LX8 1427 aa37.14■■■■□ 3.54
TRIO-204ENST00000502816 DIP2AQ14689 1571 aa37.13■■■■□ 3.53
TRIO-204ENST00000502816 NKTRP30414 1462 aaKnown RBP37.13■■■■□ 3.53
TRIO-204ENST00000502816 BCANQ96GW7 911 aa37.12■■■■□ 3.53
TRIO-204ENST00000502816 SETD5Q9C0A6 1442 aa37.1■■■■□ 3.53
TRIO-204ENST00000502816 PIK3R4Q99570 1358 aa37.07■■■■□ 3.53
TRIO-204ENST00000502816 NUTM2DQ5VT03 806 aaPredicted RBP37.07■■■■□ 3.52
TRIO-204ENST00000502816 NEXMIFQ5QGS0 1516 aa37.05■■■■□ 3.52
TRIO-204ENST00000502816 SETBP1Q9Y6X0 1596 aa37.04■■■■□ 3.52
TRIO-204ENST00000502816 MPHOSPH9Q99550 1183 aa37.04■■■■□ 3.52
TRIO-204ENST00000502816 TMEM94Q12767 1356 aa37.04■■■■□ 3.52
TRIO-204ENST00000502816 NRXN3Q9Y4C0 1643 aa37.03■■■■□ 3.52
TRIO-204ENST00000502816 ZNF326Q5BKZ1 582 aaKnown RBP37.02■■■■□ 3.52
TRIO-204ENST00000502816 PROSER2Q86WR7 435 aaPredicted RBP37.01■■■■□ 3.52
TRIO-204ENST00000502816 PIP4K2BP78356 416 aa37■■■■□ 3.51
TRIO-204ENST00000502816 SENP3Q9H4L4 574 aaPredicted RBP36.98■■■■□ 3.51
TRIO-204ENST00000502816 NCOA3Q9Y6Q9 1424 aa36.95■■■■□ 3.51
TRIO-204ENST00000502816 FOXD1Q16676 465 aa36.95■■■■□ 3.51
TRIO-204ENST00000502816 RPGRIP1LQ68CZ1 1315 aa36.94■■■■□ 3.5
TRIO-204ENST00000502816 RAB3GAP2Q9H2M9 1393 aa36.93■■■■□ 3.5
TRIO-204ENST00000502816 SCAF1Q9H7N4 1312 aaKnown RBP36.92■■■■□ 3.5
TRIO-204ENST00000502816 HSPA1LP34931 641 aa36.9■■■■□ 3.5
TRIO-204ENST00000502816 PTPRUQ92729 1446 aa36.89■■■■□ 3.5
TRIO-204ENST00000502816 PPLO60437 1756 aa36.89■■■■□ 3.5
TRIO-204ENST00000502816 CCDC144AA2RUR9 1427 aa36.88■■■■□ 3.49
TRIO-204ENST00000502816 HRCP23327 699 aa36.88■■■■□ 3.49
TRIO-204ENST00000502816 VGFO15240 615 aaPredicted RBP36.87■■■■□ 3.49
TRIO-204ENST00000502816 RBM33Q96EV2 1170 aaKnown RBP36.86■■■■□ 3.49
TRIO-204ENST00000502816 XRN1Q8IZH2 1706 aaKnown RBP36.85■■■■□ 3.49
TRIO-204ENST00000502816 FAM135BQ49AJ0 1406 aa36.85■■■■□ 3.49
TRIO-204ENST00000502816 AMOTL2Q9Y2J4 779 aa36.84■■■■□ 3.49
TRIO-204ENST00000502816 SPATA31E1Q6ZUB1 1445 aa36.84■■■■□ 3.49
TRIO-204ENST00000502816 MSH6P52701 1360 aa36.83■■■■□ 3.49
TRIO-204ENST00000502816 METP08581 1390 aa36.81■■■■□ 3.48
TRIO-204ENST00000502816 SETD1AO15047 1707 aaKnown RBP36.8■■■■□ 3.48
TRIO-204ENST00000502816 IFT172Q9UG01 1749 aa36.76■■■■□ 3.47
TRIO-204ENST00000502816 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.73■■■■□ 3.47
TRIO-204ENST00000502816 C19orf44Q9H6X5 657 aa36.72■■■■□ 3.47
TRIO-204ENST00000502816 ROBO1Q9Y6N7 1651 aa36.7■■■■□ 3.47
TRIO-204ENST00000502816 SLAIN2Q9P270 581 aa36.7■■■■□ 3.47
TRIO-204ENST00000502816 ANKRD30BQ9BXX2 1392 aa36.69■■■■□ 3.46
TRIO-204ENST00000502816 PRAG1Q86YV5 1406 aa36.68■■■■□ 3.46
TRIO-204ENST00000502816 DISP3Q9P2K9 1392 aa36.66■■■■□ 3.46
TRIO-204ENST00000502816 RGL3Q3MIN7 710 aa36.65■■■■□ 3.46
TRIO-204ENST00000502816 CADPS2Q86UW7 1296 aa36.65■■■■□ 3.46
TRIO-204ENST00000502816 DCCP43146 1447 aa36.64■■■■□ 3.46
TRIO-204ENST00000502816 ADGRF5Q8IZF2 1346 aa36.62■■■■□ 3.45
TRIO-204ENST00000502816 C14orf37Q86TY3 774 aa36.61■■■■□ 3.45
TRIO-204ENST00000502816 PTCH1Q13635 1447 aa36.6■■■■□ 3.45
TRIO-204ENST00000502816 ATF3P18847 181 aa36.58■■■■□ 3.45
TRIO-204ENST00000502816 PIK3C2GO75747 1445 aa36.56■■■■□ 3.44
TRIO-204ENST00000502816 MED1Q15648 1581 aaPredicted RBP36.56■■■■□ 3.44
TRIO-204ENST00000502816 ADGRL3Q9HAR2 1447 aa36.54■■■■□ 3.44
TRIO-204ENST00000502816 NRXN1Q9ULB1 1477 aa36.54■■■■□ 3.44
TRIO-204ENST00000502816 NALCNQ8IZF0 1738 aa36.52■■■■□ 3.44
TRIO-204ENST00000502816 ROBO2Q9HCK4 1378 aa36.52■■■■□ 3.44
TRIO-204ENST00000502816 MYOM2P54296 1465 aa36.51■■■■□ 3.44
TRIO-204ENST00000502816 PHLPP1O60346 1717 aa36.47■■■■□ 3.43
TRIO-204ENST00000502816 TECPR2O15040 1411 aa36.46■■■■□ 3.43
TRIO-204ENST00000502816 MST1RQ04912 1400 aa36.46■■■■□ 3.43
TRIO-204ENST00000502816 ASXL1Q8IXJ9 1541 aa36.45■■■■□ 3.43
TRIO-204ENST00000502816 AHDC1Q5TGY3 1603 aaPredicted RBP36.44■■■■□ 3.42
TRIO-204ENST00000502816 C14orf93Q9H972 538 aaKnown RBP36.43■■■■□ 3.42
TRIO-204ENST00000502816 KNDC1Q76NI1 1749 aa36.42■■■■□ 3.42
TRIO-204ENST00000502816 LRPPRCP42704 1394 aaKnown RBP36.42■■■■□ 3.42
TRIO-204ENST00000502816 COL16A1Q07092 1604 aaPredicted RBP36.41■■■■□ 3.42
TRIO-204ENST00000502816 ABCC11Q96J66 1382 aa36.41■■■■□ 3.42
TRIO-204ENST00000502816 ILDR2Q71H61 639 aa36.41■■■■□ 3.42
TRIO-204ENST00000502816 LAMC1P11047 1609 aa36.41■■■■□ 3.42
TRIO-204ENST00000502816 BRINP3Q76B58 766 aa36.4■■■■□ 3.42
TRIO-204ENST00000502816 STAC3Q96MF2 364 aa36.37■■■■□ 3.41
TRIO-204ENST00000502816 TMEM132EQ6IEE7 984 aa36.34■■■■□ 3.41
TRIO-204ENST00000502816 SIRT1Q96EB6 747 aa36.34■■■■□ 3.41
TRIO-204ENST00000502816 YTHDC2Q9H6S0 1430 aaKnown RBP36.34■■■■□ 3.41
TRIO-204ENST00000502816 JCADQ9P266 1359 aa36.32■■■■□ 3.4
TRIO-204ENST00000502816 NHSL1Q5SYE7 1610 aa36.32■■■■□ 3.4
TRIO-204ENST00000502816 CFAP70Q5T0N1 1121 aa36.31■■■■□ 3.4
TRIO-204ENST00000502816 C1orf167Q5SNV9 1468 aa36.31■■■■□ 3.4
TRIO-204ENST00000502816 CDC42BPGQ6DT37 1551 aa36.28■■■■□ 3.4
TRIO-204ENST00000502816 DHX57Q6P158 1386 aaKnown RBP36.27■■■■□ 3.4
TRIO-204ENST00000502816 STK26Q9P289 416 aa36.27■■■■□ 3.4
TRIO-204ENST00000502816 WAPLQ7Z5K2 1190 aa36.25■■■■□ 3.39
TRIO-204ENST00000502816 DCAF11Q8TEB1 546 aa36.25■■■■□ 3.39
TRIO-204ENST00000502816 SHPRHQ149N8 1683 aa36.24■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms