RNA–Protein interactions for RNA: ENST00000502588.5

TNFRSF25-216, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-216ENST00000502588 SLC26A8Q96RN1 970 aa34.58■■■■□ 3.13
TNFRSF25-216ENST00000502588 RIMS2Q9UQ26 1411 aa34.57■■■■□ 3.13
TNFRSF25-216ENST00000502588 TOM1O60784 492 aa34.55■■■■□ 3.12
TNFRSF25-216ENST00000502588 CHGAP10645 457 aaKnown RBP34.53■■■■□ 3.12
TNFRSF25-216ENST00000502588 NWD1Q149M9 1564 aa34.51■■■■□ 3.12
TNFRSF25-216ENST00000502588 PLEKHG1Q9ULL1 1385 aa34.49■■■■□ 3.11
TNFRSF25-216ENST00000502588 CHD2O14647 1828 aaKnown RBP34.48■■■■□ 3.11
TNFRSF25-216ENST00000502588 DISP3Q9P2K9 1392 aa34.48■■■■□ 3.11
TNFRSF25-216ENST00000502588 HFM1A2PYH4 1435 aa34.47■■■■□ 3.11
TNFRSF25-216ENST00000502588 HSPA1LP34931 641 aa34.47■■■■□ 3.11
TNFRSF25-216ENST00000502588 CLTCL1P53675 1640 aa34.46■■■■□ 3.11
TNFRSF25-216ENST00000502588 NUTM2DQ5VT03 806 aaPredicted RBP34.46■■■■□ 3.11
TNFRSF25-216ENST00000502588 BCANQ96GW7 911 aa34.45■■■■□ 3.11
TNFRSF25-216ENST00000502588 PPP1R15AO75807 674 aaPredicted RBP34.43■■■■□ 3.1
TNFRSF25-216ENST00000502588 KCNA6P17658 529 aa34.43■■■■□ 3.1
TNFRSF25-216ENST00000502588 RBM33Q96EV2 1170 aaKnown RBP34.41■■■■□ 3.1
TNFRSF25-216ENST00000502588 TMEM94Q12767 1356 aa34.4■■■■□ 3.1
TNFRSF25-216ENST00000502588 TRPM2O94759 1503 aa34.39■■■■□ 3.1
TNFRSF25-216ENST00000502588 NKTRP30414 1462 aaKnown RBP34.39■■■■□ 3.1
TNFRSF25-216ENST00000502588 ADAMTS13Q76LX8 1427 aa34.38■■■■□ 3.09
TNFRSF25-216ENST00000502588 NRXN3Q9Y4C0 1643 aa34.35■■■■□ 3.09
TNFRSF25-216ENST00000502588 KIF1BO60333 1816 aa34.34■■■■□ 3.09
TNFRSF25-216ENST00000502588 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.34■■■■□ 3.09
TNFRSF25-216ENST00000502588 DIP2AQ14689 1571 aa34.33■■■■□ 3.09
TNFRSF25-216ENST00000502588 HDGFP51858 240 aaKnown RBP34.33■■■■□ 3.09
TNFRSF25-216ENST00000502588 PROSER2Q86WR7 435 aaPredicted RBP34.33■■■■□ 3.09
TNFRSF25-216ENST00000502588 TRIM52Q96A61 297 aa34.32■■■■□ 3.08
TNFRSF25-216ENST00000502588 ILDR2Q71H61 639 aa34.31■■■■□ 3.08
TNFRSF25-216ENST00000502588 TBX22Q9Y458 520 aa34.28■■■■□ 3.08
TNFRSF25-216ENST00000502588 NEXMIFQ5QGS0 1516 aa34.28■■■■□ 3.08
TNFRSF25-216ENST00000502588 MED1Q15648 1581 aaPredicted RBP34.28■■■■□ 3.08
TNFRSF25-216ENST00000502588 SETBP1Q9Y6X0 1596 aa34.24■■■■□ 3.07
TNFRSF25-216ENST00000502588 ROBO1Q9Y6N7 1651 aa34.24■■■■□ 3.07
TNFRSF25-216ENST00000502588 ZNF326Q5BKZ1 582 aaKnown RBP34.22■■■■□ 3.07
TNFRSF25-216ENST00000502588 PTPRUQ92729 1446 aa34.21■■■■□ 3.07
TNFRSF25-216ENST00000502588 SLC4A1APQ9BWU0 796 aaKnown RBP34.2■■■■□ 3.07
TNFRSF25-216ENST00000502588 XRN1Q8IZH2 1706 aaKnown RBP34.18■■■■□ 3.06
TNFRSF25-216ENST00000502588 PIK3R4Q99570 1358 aa34.16■■■■□ 3.06
TNFRSF25-216ENST00000502588 FOXD1Q16676 465 aa34.16■■■■□ 3.06
TNFRSF25-216ENST00000502588 FAM135BQ49AJ0 1406 aa34.15■■■■□ 3.06
TNFRSF25-216ENST00000502588 MSH6P52701 1360 aa34.15■■■■□ 3.06
TNFRSF25-216ENST00000502588 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.15■■■■□ 3.06
TNFRSF25-216ENST00000502588 PPLO60437 1756 aa34.12■■■■□ 3.05
TNFRSF25-216ENST00000502588 SETD1AO15047 1707 aaKnown RBP34.11■■■■□ 3.05
TNFRSF25-216ENST00000502588 AMOTL2Q9Y2J4 779 aa34.09■■■■□ 3.05
TNFRSF25-216ENST00000502588 METP08581 1390 aa34.09■■■■□ 3.05
TNFRSF25-216ENST00000502588 NCOA3Q9Y6Q9 1424 aa34.04■■■■□ 3.04
TNFRSF25-216ENST00000502588 PHLPP1O60346 1717 aa34.03■■■■□ 3.04
TNFRSF25-216ENST00000502588 C14orf37Q86TY3 774 aa34.02■■■■□ 3.04
TNFRSF25-216ENST00000502588 MPHOSPH9Q99550 1183 aa34.01■■■■□ 3.03
TNFRSF25-216ENST00000502588 SLAIN2Q9P270 581 aa34.01■■■■□ 3.03
TNFRSF25-216ENST00000502588 IFT172Q9UG01 1749 aa33.99■■■■□ 3.03
TNFRSF25-216ENST00000502588 SETD5Q9C0A6 1442 aa33.98■■■■□ 3.03
TNFRSF25-216ENST00000502588 NALCNQ8IZF0 1738 aa33.98■■■■□ 3.03
TNFRSF25-216ENST00000502588 CCDC144AA2RUR9 1427 aa33.95■■■■□ 3.02
TNFRSF25-216ENST00000502588 COL16A1Q07092 1604 aaPredicted RBP33.93■■■■□ 3.02
TNFRSF25-216ENST00000502588 C19orf44Q9H6X5 657 aa33.93■■■■□ 3.02
TNFRSF25-216ENST00000502588 SPATA31E1Q6ZUB1 1445 aa33.92■■■■□ 3.02
TNFRSF25-216ENST00000502588 RAB3GAP2Q9H2M9 1393 aa33.9■■■■□ 3.02
TNFRSF25-216ENST00000502588 RPGRIP1LQ68CZ1 1315 aa33.9■■■■□ 3.02
TNFRSF25-216ENST00000502588 VGFO15240 615 aaPredicted RBP33.9■■■■□ 3.02
TNFRSF25-216ENST00000502588 SOCS7O14512 581 aa33.88■■■■□ 3.01
TNFRSF25-216ENST00000502588 CADPS2Q86UW7 1296 aa33.88■■■■□ 3.01
TNFRSF25-216ENST00000502588 ATF3P18847 181 aa33.87■■■■□ 3.01
TNFRSF25-216ENST00000502588 PHF23Q9BUL5 403 aaPredicted RBP33.85■■■■□ 3.01
TNFRSF25-216ENST00000502588 AHDC1Q5TGY3 1603 aaPredicted RBP33.85■■■■□ 3.01
TNFRSF25-216ENST00000502588 DCCP43146 1447 aa33.85■■■■□ 3.01
TNFRSF25-216ENST00000502588 RGL3Q3MIN7 710 aa33.84■■■■□ 3.01
TNFRSF25-216ENST00000502588 ADGRL3Q9HAR2 1447 aa33.84■■■■□ 3.01
TNFRSF25-216ENST00000502588 ADGRF5Q8IZF2 1346 aa33.83■■■■□ 3.01
TNFRSF25-216ENST00000502588 MST1RQ04912 1400 aa33.82■■■■□ 3
TNFRSF25-216ENST00000502588 ROBO2Q9HCK4 1378 aa33.81■■■■□ 3
TNFRSF25-216ENST00000502588 PTCH1Q13635 1447 aa33.8■■■■□ 3
TNFRSF25-216ENST00000502588 ASXL1Q8IXJ9 1541 aa33.79■■■■□ 3
TNFRSF25-216ENST00000502588 BRINP3Q76B58 766 aa33.77■■■■□ 3
TNFRSF25-216ENST00000502588 NHSL1Q5SYE7 1610 aa33.77■■■■□ 3
TNFRSF25-216ENST00000502588 PRAG1Q86YV5 1406 aa33.77■■■■□ 3
TNFRSF25-216ENST00000502588 RGS17Q9UGC6 210 aaPredicted RBP33.76■■■□□ 2.99
TNFRSF25-216ENST00000502588 JCADQ9P266 1359 aa33.73■■■□□ 2.99
TNFRSF25-216ENST00000502588 SHPRHQ149N8 1683 aa33.73■■■□□ 2.99
TNFRSF25-216ENST00000502588 ANKRD30BQ9BXX2 1392 aa33.72■■■□□ 2.99
TNFRSF25-216ENST00000502588 ACIN1Q9UKV3 1341 aaKnown RBP33.7■■■□□ 2.99
TNFRSF25-216ENST00000502588 PIK3C2GO75747 1445 aa33.7■■■□□ 2.98
TNFRSF25-216ENST00000502588 LRP6O75581 1613 aa33.68■■■□□ 2.98
TNFRSF25-216ENST00000502588 KNDC1Q76NI1 1749 aa33.68■■■□□ 2.98
TNFRSF25-216ENST00000502588 C1orf167Q5SNV9 1468 aa33.63■■■□□ 2.97
TNFRSF25-216ENST00000502588 DDX17Q92841 729 aaKnown RBP33.63■■■□□ 2.97
TNFRSF25-216ENST00000502588 TMEM132EQ6IEE7 984 aa33.62■■■□□ 2.97
TNFRSF25-216ENST00000502588 NRXN1Q9ULB1 1477 aa33.62■■■□□ 2.97
TNFRSF25-216ENST00000502588 STK26Q9P289 416 aa33.61■■■□□ 2.97
TNFRSF25-216ENST00000502588 MYOM2P54296 1465 aa33.61■■■□□ 2.97
TNFRSF25-216ENST00000502588 TECPR2O15040 1411 aa33.6■■■□□ 2.97
TNFRSF25-216ENST00000502588 CDC42BPGQ6DT37 1551 aa33.6■■■□□ 2.97
TNFRSF25-216ENST00000502588 LRPPRCP42704 1394 aaKnown RBP33.59■■■□□ 2.97
TNFRSF25-216ENST00000502588 LAMC1P11047 1609 aa33.58■■■□□ 2.97
TNFRSF25-216ENST00000502588 POTEAQ6S8J7 498 aa33.57■■■□□ 2.96
TNFRSF25-216ENST00000502588 PLEKHH1Q9ULM0 1364 aa33.56■■■□□ 2.96
TNFRSF25-216ENST00000502588 WAPLQ7Z5K2 1190 aa33.55■■■□□ 2.96
TNFRSF25-216ENST00000502588 SPATA31A6Q5VVP1 1343 aa33.53■■■□□ 2.96
TNFRSF25-216ENST00000502588 YTHDC2Q9H6S0 1430 aaKnown RBP33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms