RNA–Protein interactions for RNA: ENST00000502557.5

CCHCR1-216, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-216ENST00000502557 ZNF326Q5BKZ1 582 aaKnown RBP26.18■■□□□ 1.78
CCHCR1-216ENST00000502557 HDGFP51858 240 aaKnown RBP26.17■■□□□ 1.78
CCHCR1-216ENST00000502557 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.17■■□□□ 1.78
CCHCR1-216ENST00000502557 NUTM2DQ5VT03 806 aaPredicted RBP26.15■■□□□ 1.78
CCHCR1-216ENST00000502557 PPP1R15AO75807 674 aaPredicted RBP26.14■■□□□ 1.78
CCHCR1-216ENST00000502557 POLR1AO95602 1720 aaPredicted RBP26.14■■□□□ 1.77
CCHCR1-216ENST00000502557 SPATA31E1Q6ZUB1 1445 aa26.14■■□□□ 1.77
CCHCR1-216ENST00000502557 DHX57Q6P158 1386 aaKnown RBP26.13■■□□□ 1.77
CCHCR1-216ENST00000502557 PLEKHG1Q9ULL1 1385 aa26.11■■□□□ 1.77
CCHCR1-216ENST00000502557 MYO5BQ9ULV0 1848 aa26.1■■□□□ 1.77
CCHCR1-216ENST00000502557 RPGRIP1LQ68CZ1 1315 aa26.1■■□□□ 1.77
CCHCR1-216ENST00000502557 RGL3Q3MIN7 710 aa26.09■■□□□ 1.77
CCHCR1-216ENST00000502557 SENP3Q9H4L4 574 aaPredicted RBP26.08■■□□□ 1.77
CCHCR1-216ENST00000502557 IQGAP1P46940 1657 aa26.08■■□□□ 1.77
CCHCR1-216ENST00000502557 NEXMIFQ5QGS0 1516 aa26.08■■□□□ 1.77
CCHCR1-216ENST00000502557 BCANQ96GW7 911 aa26.06■■□□□ 1.76
CCHCR1-216ENST00000502557 ZNF335Q9H4Z2 1342 aaPredicted RBP26.06■■□□□ 1.76
CCHCR1-216ENST00000502557 KIF1BO60333 1816 aa26.05■■□□□ 1.76
CCHCR1-216ENST00000502557 SLC26A8Q96RN1 970 aa26.05■■□□□ 1.76
CCHCR1-216ENST00000502557 VGFO15240 615 aaPredicted RBP26.03■■□□□ 1.76
CCHCR1-216ENST00000502557 ADAMTS13Q76LX8 1427 aa26■■□□□ 1.75
CCHCR1-216ENST00000502557 TBX22Q9Y458 520 aa25.99■■□□□ 1.75
CCHCR1-216ENST00000502557 LTBP4Q8N2S1 1624 aa25.98■■□□□ 1.75
CCHCR1-216ENST00000502557 ADGRF5Q8IZF2 1346 aa25.96■■□□□ 1.75
CCHCR1-216ENST00000502557 SIN3AQ96ST3 1273 aa25.96■■□□□ 1.75
CCHCR1-216ENST00000502557 SETBP1Q9Y6X0 1596 aa25.95■■□□□ 1.74
CCHCR1-216ENST00000502557 KCNA6P17658 529 aa25.91■■□□□ 1.74
CCHCR1-216ENST00000502557 CERKQ8TCT0 537 aa25.91■■□□□ 1.74
CCHCR1-216ENST00000502557 NRXN3Q9Y4C0 1643 aa25.91■■□□□ 1.74
CCHCR1-216ENST00000502557 DIP2AQ14689 1571 aa25.9■■□□□ 1.74
CCHCR1-216ENST00000502557 PPLO60437 1756 aa25.9■■□□□ 1.74
CCHCR1-216ENST00000502557 NEUROD1Q13562 356 aa25.89■■□□□ 1.74
CCHCR1-216ENST00000502557 DCAF11Q8TEB1 546 aa25.89■■□□□ 1.74
CCHCR1-216ENST00000502557 MYOM2P54296 1465 aa25.89■■□□□ 1.73
CCHCR1-216ENST00000502557 CPS1P31327 1500 aa25.88■■□□□ 1.73
CCHCR1-216ENST00000502557 METP08581 1390 aa25.87■■□□□ 1.73
CCHCR1-216ENST00000502557 PIK3R4Q99570 1358 aa25.87■■□□□ 1.73
CCHCR1-216ENST00000502557 KDM2AQ9Y2K7 1162 aa25.87■■□□□ 1.73
CCHCR1-216ENST00000502557 NRXN1Q9ULB1 1477 aa25.86■■□□□ 1.73
CCHCR1-216ENST00000502557 PIK3C2GO75747 1445 aa25.86■■□□□ 1.73
CCHCR1-216ENST00000502557 IFT172Q9UG01 1749 aa25.85■■□□□ 1.73
CCHCR1-216ENST00000502557 PTPRUQ92729 1446 aa25.84■■□□□ 1.73
CCHCR1-216ENST00000502557 STAC3Q96MF2 364 aa25.84■■□□□ 1.73
CCHCR1-216ENST00000502557 ALKQ9UM73 1620 aa25.83■■□□□ 1.73
CCHCR1-216ENST00000502557 NWD1Q149M9 1564 aa25.82■■□□□ 1.72
CCHCR1-216ENST00000502557 L3MBTL2Q969R5 705 aa25.81■■□□□ 1.72
CCHCR1-216ENST00000502557 AMOTL2Q9Y2J4 779 aa25.81■■□□□ 1.72
CCHCR1-216ENST00000502557 LRRC7Q96NW7 1537 aa25.81■■□□□ 1.72
CCHCR1-216ENST00000502557 STRCP1A6NGW2 1772 aa25.81■■□□□ 1.72
CCHCR1-216ENST00000502557 C14orf93Q9H972 538 aaKnown RBP25.79■■□□□ 1.72
CCHCR1-216ENST00000502557 NKTRP30414 1462 aaKnown RBP25.79■■□□□ 1.72
CCHCR1-216ENST00000502557 CFAP70Q5T0N1 1121 aa25.77■■□□□ 1.72
CCHCR1-216ENST00000502557 PROSER2Q86WR7 435 aaPredicted RBP25.77■■□□□ 1.72
CCHCR1-216ENST00000502557 IQSEC2Q5JU85 1478 aa25.77■■□□□ 1.72
CCHCR1-216ENST00000502557 TMEM94Q12767 1356 aa25.75■■□□□ 1.71
CCHCR1-216ENST00000502557 CLSPNQ9HAW4 1339 aa25.74■■□□□ 1.71
CCHCR1-216ENST00000502557 SETD1AO15047 1707 aaKnown RBP25.74■■□□□ 1.71
CCHCR1-216ENST00000502557 TMEM132EQ6IEE7 984 aa25.73■■□□□ 1.71
CCHCR1-216ENST00000502557 RBM33Q96EV2 1170 aaKnown RBP25.73■■□□□ 1.71
CCHCR1-216ENST00000502557 ASXL1Q8IXJ9 1541 aa25.72■■□□□ 1.71
CCHCR1-216ENST00000502557 CHD2O14647 1828 aaKnown RBP25.72■■□□□ 1.71
CCHCR1-216ENST00000502557 CCER1Q8TC90 406 aaPredicted RBP25.71■■□□□ 1.71
CCHCR1-216ENST00000502557 XRN1Q8IZH2 1706 aaKnown RBP25.7■■□□□ 1.7
CCHCR1-216ENST00000502557 PRAG1Q86YV5 1406 aa25.7■■□□□ 1.7
CCHCR1-216ENST00000502557 LRPPRCP42704 1394 aaKnown RBP25.69■■□□□ 1.7
CCHCR1-216ENST00000502557 TONSLQ96HA7 1378 aa25.69■■□□□ 1.7
CCHCR1-216ENST00000502557 STK26Q9P289 416 aa25.67■■□□□ 1.7
CCHCR1-216ENST00000502557 ROBO2Q9HCK4 1378 aa25.67■■□□□ 1.7
CCHCR1-216ENST00000502557 PTCH1Q13635 1447 aa25.65■■□□□ 1.7
CCHCR1-216ENST00000502557 YTHDC2Q9H6S0 1430 aaKnown RBP25.65■■□□□ 1.7
CCHCR1-216ENST00000502557 NCOA3Q9Y6Q9 1424 aa25.65■■□□□ 1.7
CCHCR1-216ENST00000502557 LAMC1P11047 1609 aa25.65■■□□□ 1.7
CCHCR1-216ENST00000502557 ABCC11Q96J66 1382 aa25.65■■□□□ 1.7
CCHCR1-216ENST00000502557 FBXO41Q8TF61 875 aa25.64■■□□□ 1.7
CCHCR1-216ENST00000502557 TECPR2O15040 1411 aa25.63■■□□□ 1.69
CCHCR1-216ENST00000502557 ADGRB1O14514 1584 aa25.63■■□□□ 1.69
CCHCR1-216ENST00000502557 UBAP1LF5GYI3 381 aa25.62■■□□□ 1.69
CCHCR1-216ENST00000502557 C14orf37Q86TY3 774 aa25.6■■□□□ 1.69
CCHCR1-216ENST00000502557 NBPF1Q3BBV0 1214 aa25.59■■□□□ 1.69
CCHCR1-216ENST00000502557 NBPF8Q3BBV2 869 aa25.59■■□□□ 1.69
CCHCR1-216ENST00000502557 MSH6P52701 1360 aa25.58■■□□□ 1.69
CCHCR1-216ENST00000502557 TOM1O60784 492 aa25.58■■□□□ 1.69
CCHCR1-216ENST00000502557 SIRT1Q96EB6 747 aa25.57■■□□□ 1.68
CCHCR1-216ENST00000502557 C19orf44Q9H6X5 657 aa25.57■■□□□ 1.68
CCHCR1-216ENST00000502557 XIRP1Q702N8 1843 aaKnown RBP25.56■■□□□ 1.68
CCHCR1-216ENST00000502557 WAPLQ7Z5K2 1190 aa25.56■■□□□ 1.68
CCHCR1-216ENST00000502557 PLEKHH1Q9ULM0 1364 aa25.56■■□□□ 1.68
CCHCR1-216ENST00000502557 TIMELESSQ9UNS1 1208 aa25.55■■□□□ 1.68
CCHCR1-216ENST00000502557 TRAK1Q9UPV9 953 aa25.55■■□□□ 1.68
CCHCR1-216ENST00000502557 FAM135BQ49AJ0 1406 aa25.54■■□□□ 1.68
CCHCR1-216ENST00000502557 ADGRL3Q9HAR2 1447 aa25.54■■□□□ 1.68
CCHCR1-216ENST00000502557 DLC1Q96QB1 1528 aa25.52■■□□□ 1.68
CCHCR1-216ENST00000502557 KIAA1210Q9ULL0 1709 aa25.51■■□□□ 1.68
CCHCR1-216ENST00000502557 PRAM1Q96QH2 718 aa25.51■■□□□ 1.67
CCHCR1-216ENST00000502557 KNDC1Q76NI1 1749 aa25.51■■□□□ 1.67
CCHCR1-216ENST00000502557 ATF3P18847 181 aa25.49■■□□□ 1.67
CCHCR1-216ENST00000502557 PIP4K2BP78356 416 aa25.49■■□□□ 1.67
CCHCR1-216ENST00000502557 DCCP43146 1447 aa25.48■■□□□ 1.67
CCHCR1-216ENST00000502557 ROCK2O75116 1388 aaKnown RBP25.48■■□□□ 1.67
CCHCR1-216ENST00000502557 CADPS2Q86UW7 1296 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms