RNA–Protein interactions for RNA: ENST00000502501.1

PROM1-202, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-202ENST00000502501 RAB3GAP2Q9H2M9 1393 aa38.29■■■■□ 3.72
PROM1-202ENST00000502501 ILDR1Q86SU0 546 aaPredicted RBP38.28■■■■□ 3.72
PROM1-202ENST00000502501 PLEKHG1Q9ULL1 1385 aa38.26■■■■□ 3.72
PROM1-202ENST00000502501 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.25■■■■□ 3.71
PROM1-202ENST00000502501 HRCP23327 699 aa38.24■■■■□ 3.71
PROM1-202ENST00000502501 KIF1BO60333 1816 aa38.24■■■■□ 3.71
PROM1-202ENST00000502501 MPHOSPH9Q99550 1183 aa38.22■■■■□ 3.71
PROM1-202ENST00000502501 STRCP1A6NGW2 1772 aa38.19■■■■□ 3.7
PROM1-202ENST00000502501 CHGAP10645 457 aaKnown RBP38.18■■■■□ 3.7
PROM1-202ENST00000502501 DIP2AQ14689 1571 aa38.17■■■■□ 3.7
PROM1-202ENST00000502501 PPP1R15AO75807 674 aaPredicted RBP38.13■■■■□ 3.69
PROM1-202ENST00000502501 NWD1Q149M9 1564 aa38.13■■■■□ 3.69
PROM1-202ENST00000502501 NEXMIFQ5QGS0 1516 aa38.12■■■■□ 3.69
PROM1-202ENST00000502501 CCDC144AA2RUR9 1427 aa38.1■■■■□ 3.69
PROM1-202ENST00000502501 SETBP1Q9Y6X0 1596 aa38.09■■■■□ 3.69
PROM1-202ENST00000502501 LRRC7Q96NW7 1537 aa38.08■■■■□ 3.69
PROM1-202ENST00000502501 ADAMTS13Q76LX8 1427 aa38.07■■■■□ 3.69
PROM1-202ENST00000502501 NKTRP30414 1462 aaKnown RBP38.06■■■■□ 3.68
PROM1-202ENST00000502501 TBX22Q9Y458 520 aa38.04■■■■□ 3.68
PROM1-202ENST00000502501 PIK3R4Q99570 1358 aa38.04■■■■□ 3.68
PROM1-202ENST00000502501 FOXD1Q16676 465 aa38.03■■■■□ 3.68
PROM1-202ENST00000502501 SLC26A8Q96RN1 970 aa38.03■■■■□ 3.68
PROM1-202ENST00000502501 NRXN3Q9Y4C0 1643 aa38.02■■■■□ 3.68
PROM1-202ENST00000502501 RPGRIP1LQ68CZ1 1315 aa38.02■■■■□ 3.68
PROM1-202ENST00000502501 KCNA6P17658 529 aa38.01■■■■□ 3.68
PROM1-202ENST00000502501 ZNF326Q5BKZ1 582 aaKnown RBP38.01■■■■□ 3.68
PROM1-202ENST00000502501 CHD2O14647 1828 aaKnown RBP38.01■■■■□ 3.67
PROM1-202ENST00000502501 SPATA31E1Q6ZUB1 1445 aa38■■■■□ 3.67
PROM1-202ENST00000502501 PPLO60437 1756 aa37.97■■■■□ 3.67
PROM1-202ENST00000502501 BCANQ96GW7 911 aa37.96■■■■□ 3.67
PROM1-202ENST00000502501 XIRP1Q702N8 1843 aaKnown RBP37.93■■■■□ 3.66
PROM1-202ENST00000502501 NUTM2DQ5VT03 806 aaPredicted RBP37.92■■■■□ 3.66
PROM1-202ENST00000502501 IFT172Q9UG01 1749 aa37.9■■■■□ 3.66
PROM1-202ENST00000502501 VGFO15240 615 aaPredicted RBP37.89■■■■□ 3.66
PROM1-202ENST00000502501 ANKRD30BQ9BXX2 1392 aa37.88■■■■□ 3.65
PROM1-202ENST00000502501 UBAP1LF5GYI3 381 aa37.86■■■■□ 3.65
PROM1-202ENST00000502501 ALKQ9UM73 1620 aa37.85■■■■□ 3.65
PROM1-202ENST00000502501 TOM1O60784 492 aa37.83■■■■□ 3.65
PROM1-202ENST00000502501 NCOA3Q9Y6Q9 1424 aa37.83■■■■□ 3.65
PROM1-202ENST00000502501 SETD1AO15047 1707 aaKnown RBP37.83■■■■□ 3.65
PROM1-202ENST00000502501 XRN1Q8IZH2 1706 aaKnown RBP37.83■■■■□ 3.65
PROM1-202ENST00000502501 TMEM94Q12767 1356 aa37.82■■■■□ 3.65
PROM1-202ENST00000502501 PRAG1Q86YV5 1406 aa37.76■■■■□ 3.63
PROM1-202ENST00000502501 PTPRUQ92729 1446 aa37.76■■■■□ 3.63
PROM1-202ENST00000502501 METP08581 1390 aa37.74■■■■□ 3.63
PROM1-202ENST00000502501 PROSER2Q86WR7 435 aaPredicted RBP37.74■■■■□ 3.63
PROM1-202ENST00000502501 MYOM2P54296 1465 aa37.73■■■■□ 3.63
PROM1-202ENST00000502501 SENP3Q9H4L4 574 aaPredicted RBP37.73■■■■□ 3.63
PROM1-202ENST00000502501 NRXN1Q9ULB1 1477 aa37.7■■■■□ 3.63
PROM1-202ENST00000502501 PIK3C2GO75747 1445 aa37.7■■■■□ 3.62
PROM1-202ENST00000502501 AMOTL2Q9Y2J4 779 aa37.68■■■■□ 3.62
PROM1-202ENST00000502501 RGL3Q3MIN7 710 aa37.67■■■■□ 3.62
PROM1-202ENST00000502501 MSH6P52701 1360 aa37.65■■■■□ 3.62
PROM1-202ENST00000502501 PTCH1Q13635 1447 aa37.64■■■■□ 3.62
PROM1-202ENST00000502501 TRIM26Q12899 539 aaPredicted RBP37.64■■■■□ 3.62
PROM1-202ENST00000502501 ADGRF5Q8IZF2 1346 aa37.63■■■■□ 3.62
PROM1-202ENST00000502501 LAMC1P11047 1609 aa37.61■■■■□ 3.61
PROM1-202ENST00000502501 STAC3Q96MF2 364 aa37.58■■■■□ 3.61
PROM1-202ENST00000502501 DCCP43146 1447 aa37.58■■■■□ 3.61
PROM1-202ENST00000502501 FAM135BQ49AJ0 1406 aa37.55■■■■□ 3.6
PROM1-202ENST00000502501 PIP4K2BP78356 416 aa37.54■■■■□ 3.6
PROM1-202ENST00000502501 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.53■■■■□ 3.6
PROM1-202ENST00000502501 RBM33Q96EV2 1170 aaKnown RBP37.53■■■■□ 3.6
PROM1-202ENST00000502501 TECPR2O15040 1411 aa37.53■■■■□ 3.6
PROM1-202ENST00000502501 C19orf44Q9H6X5 657 aa37.52■■■■□ 3.6
PROM1-202ENST00000502501 ASXL1Q8IXJ9 1541 aa37.51■■■■□ 3.6
PROM1-202ENST00000502501 KNDC1Q76NI1 1749 aa37.5■■■■□ 3.59
PROM1-202ENST00000502501 SCAF1Q9H7N4 1312 aaKnown RBP37.49■■■■□ 3.59
PROM1-202ENST00000502501 ADGRL3Q9HAR2 1447 aa37.48■■■■□ 3.59
PROM1-202ENST00000502501 CADPS2Q86UW7 1296 aa37.46■■■■□ 3.59
PROM1-202ENST00000502501 C14orf93Q9H972 538 aaKnown RBP37.46■■■■□ 3.59
PROM1-202ENST00000502501 LRPPRCP42704 1394 aaKnown RBP37.45■■■■□ 3.59
PROM1-202ENST00000502501 NALCNQ8IZF0 1738 aa37.44■■■■□ 3.58
PROM1-202ENST00000502501 DHX57Q6P158 1386 aaKnown RBP37.44■■■■□ 3.58
PROM1-202ENST00000502501 ROBO2Q9HCK4 1378 aa37.44■■■■□ 3.58
PROM1-202ENST00000502501 ROBO1Q9Y6N7 1651 aa37.44■■■■□ 3.58
PROM1-202ENST00000502501 C14orf37Q86TY3 774 aa37.43■■■■□ 3.58
PROM1-202ENST00000502501 ABCC11Q96J66 1382 aa37.42■■■■□ 3.58
PROM1-202ENST00000502501 HSPA1LP34931 641 aa37.4■■■■□ 3.58
PROM1-202ENST00000502501 SLAIN2Q9P270 581 aa37.4■■■■□ 3.58
PROM1-202ENST00000502501 YTHDC2Q9H6S0 1430 aaKnown RBP37.38■■■■□ 3.57
PROM1-202ENST00000502501 ATF3P18847 181 aa37.38■■■■□ 3.57
PROM1-202ENST00000502501 DCAF11Q8TEB1 546 aa37.36■■■■□ 3.57
PROM1-202ENST00000502501 ADGRB1O14514 1584 aa37.36■■■■□ 3.57
PROM1-202ENST00000502501 SIRT1Q96EB6 747 aa37.33■■■■□ 3.57
PROM1-202ENST00000502501 CDC42BPGQ6DT37 1551 aa37.31■■■■□ 3.56
PROM1-202ENST00000502501 MST1RQ04912 1400 aa37.31■■■■□ 3.56
PROM1-202ENST00000502501 CFAP70Q5T0N1 1121 aa37.31■■■■□ 3.56
PROM1-202ENST00000502501 DLC1Q96QB1 1528 aa37.31■■■■□ 3.56
PROM1-202ENST00000502501 KIAA1210Q9ULL0 1709 aa37.29■■■■□ 3.56
PROM1-202ENST00000502501 TMEM132EQ6IEE7 984 aa37.28■■■■□ 3.56
PROM1-202ENST00000502501 AHDC1Q5TGY3 1603 aaPredicted RBP37.25■■■■□ 3.55
PROM1-202ENST00000502501 KDM2AQ9Y2K7 1162 aa37.22■■■■□ 3.55
PROM1-202ENST00000502501 STK26Q9P289 416 aa37.2■■■■□ 3.55
PROM1-202ENST00000502501 PHLPP1O60346 1717 aa37.18■■■■□ 3.54
PROM1-202ENST00000502501 COL16A1Q07092 1604 aaPredicted RBP37.17■■■■□ 3.54
PROM1-202ENST00000502501 C1orf167Q5SNV9 1468 aa37.16■■■■□ 3.54
PROM1-202ENST00000502501 NHSL1Q5SYE7 1610 aa37.15■■■■□ 3.54
PROM1-202ENST00000502501 BRINP3Q76B58 766 aa37.15■■■■□ 3.54
PROM1-202ENST00000502501 PLEKHH1Q9ULM0 1364 aa37.15■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms