RNA–Protein interactions for RNA: ENST00000498644.5

MTA1-216, Transcript of metastasis associated 1, humanhuman

TSL 2

Gene MTA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-216ENST00000498644 RIMS2Q9UQ26 1411 aa25.42■■□□□ 1.66
MTA1-216ENST00000498644 ALKQ9UM73 1620 aa25.41■■□□□ 1.66
MTA1-216ENST00000498644 CHGAP10645 457 aaKnown RBP25.41■■□□□ 1.66
MTA1-216ENST00000498644 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.4■■□□□ 1.66
MTA1-216ENST00000498644 PLEKHG1Q9ULL1 1385 aa25.4■■□□□ 1.66
MTA1-216ENST00000498644 BCANQ96GW7 911 aa25.39■■□□□ 1.66
MTA1-216ENST00000498644 PPP1R15AO75807 674 aaPredicted RBP25.38■■□□□ 1.65
MTA1-216ENST00000498644 DISP3Q9P2K9 1392 aa25.38■■□□□ 1.65
MTA1-216ENST00000498644 HSPA1LP34931 641 aa25.37■■□□□ 1.65
MTA1-216ENST00000498644 XIRP1Q702N8 1843 aaKnown RBP25.37■■□□□ 1.65
MTA1-216ENST00000498644 HFM1A2PYH4 1435 aa25.35■■□□□ 1.65
MTA1-216ENST00000498644 SPHKAPQ2M3C7 1700 aa25.34■■□□□ 1.65
MTA1-216ENST00000498644 PROSER2Q86WR7 435 aaPredicted RBP25.32■■□□□ 1.64
MTA1-216ENST00000498644 TBX22Q9Y458 520 aa25.32■■□□□ 1.64
MTA1-216ENST00000498644 TMEM94Q12767 1356 aa25.31■■□□□ 1.64
MTA1-216ENST00000498644 NWD1Q149M9 1564 aa25.31■■□□□ 1.64
MTA1-216ENST00000498644 NKTRP30414 1462 aaKnown RBP25.31■■□□□ 1.64
MTA1-216ENST00000498644 CHD2O14647 1828 aaKnown RBP25.29■■□□□ 1.64
MTA1-216ENST00000498644 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
MTA1-216ENST00000498644 NUTM2DQ5VT03 806 aaPredicted RBP25.28■■□□□ 1.64
MTA1-216ENST00000498644 TRIM52Q96A61 297 aa25.27■■□□□ 1.64
MTA1-216ENST00000498644 DIP2AQ14689 1571 aa25.26■■□□□ 1.63
MTA1-216ENST00000498644 ADAMTS13Q76LX8 1427 aa25.25■■□□□ 1.63
MTA1-216ENST00000498644 TRPM2O94759 1503 aa25.24■■□□□ 1.63
MTA1-216ENST00000498644 PIK3R4Q99570 1358 aa25.23■■□□□ 1.63
MTA1-216ENST00000498644 RBM33Q96EV2 1170 aaKnown RBP25.22■■□□□ 1.63
MTA1-216ENST00000498644 CLTCL1P53675 1640 aa25.22■■□□□ 1.63
MTA1-216ENST00000498644 ZNF326Q5BKZ1 582 aaKnown RBP25.21■■□□□ 1.63
MTA1-216ENST00000498644 FAM135BQ49AJ0 1406 aa25.2■■□□□ 1.63
MTA1-216ENST00000498644 SLC4A1APQ9BWU0 796 aaKnown RBP25.2■■□□□ 1.62
MTA1-216ENST00000498644 ILDR2Q71H61 639 aa25.19■■□□□ 1.62
MTA1-216ENST00000498644 MSH6P52701 1360 aa25.18■■□□□ 1.62
MTA1-216ENST00000498644 KIF1BO60333 1816 aa25.18■■□□□ 1.62
MTA1-216ENST00000498644 NCOA3Q9Y6Q9 1424 aa25.18■■□□□ 1.62
MTA1-216ENST00000498644 SETBP1Q9Y6X0 1596 aa25.15■■□□□ 1.62
MTA1-216ENST00000498644 AMOTL2Q9Y2J4 779 aa25.13■■□□□ 1.61
MTA1-216ENST00000498644 MED1Q15648 1581 aaPredicted RBP25.13■■□□□ 1.61
MTA1-216ENST00000498644 NEXMIFQ5QGS0 1516 aa25.12■■□□□ 1.61
MTA1-216ENST00000498644 NRXN3Q9Y4C0 1643 aa25.12■■□□□ 1.61
MTA1-216ENST00000498644 SLAIN2Q9P270 581 aa25.11■■□□□ 1.61
MTA1-216ENST00000498644 PTPRUQ92729 1446 aa25.1■■□□□ 1.61
MTA1-216ENST00000498644 ROBO1Q9Y6N7 1651 aa25.1■■□□□ 1.61
MTA1-216ENST00000498644 ACIN1Q9UKV3 1341 aaKnown RBP25.1■■□□□ 1.61
MTA1-216ENST00000498644 C14orf37Q86TY3 774 aa25.08■■□□□ 1.61
MTA1-216ENST00000498644 VGFO15240 615 aaPredicted RBP25.07■■□□□ 1.6
MTA1-216ENST00000498644 C19orf44Q9H6X5 657 aa25.07■■□□□ 1.6
MTA1-216ENST00000498644 RPGRIP1LQ68CZ1 1315 aa25.07■■□□□ 1.6
MTA1-216ENST00000498644 MPHOSPH9Q99550 1183 aa25.05■■□□□ 1.6
MTA1-216ENST00000498644 METP08581 1390 aa25.05■■□□□ 1.6
MTA1-216ENST00000498644 XRN1Q8IZH2 1706 aaKnown RBP25.04■■□□□ 1.6
MTA1-216ENST00000498644 CADPS2Q86UW7 1296 aa25.04■■□□□ 1.6
MTA1-216ENST00000498644 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.03■■□□□ 1.6
MTA1-216ENST00000498644 SOCS7O14512 581 aa25.03■■□□□ 1.6
MTA1-216ENST00000498644 FOXD1Q16676 465 aa25.03■■□□□ 1.6
MTA1-216ENST00000498644 ATF3P18847 181 aa25.02■■□□□ 1.6
MTA1-216ENST00000498644 SETD5Q9C0A6 1442 aa25.01■■□□□ 1.59
MTA1-216ENST00000498644 CCDC144AA2RUR9 1427 aa24.99■■□□□ 1.59
MTA1-216ENST00000498644 PPLO60437 1756 aa24.98■■□□□ 1.59
MTA1-216ENST00000498644 PHF23Q9BUL5 403 aaPredicted RBP24.98■■□□□ 1.59
MTA1-216ENST00000498644 DCCP43146 1447 aa24.96■■□□□ 1.59
MTA1-216ENST00000498644 PHLPP1O60346 1717 aa24.95■■□□□ 1.59
MTA1-216ENST00000498644 SETD1AO15047 1707 aaKnown RBP24.94■■□□□ 1.58
MTA1-216ENST00000498644 SPATA31E1Q6ZUB1 1445 aa24.92■■□□□ 1.58
MTA1-216ENST00000498644 RGL3Q3MIN7 710 aa24.9■■□□□ 1.58
MTA1-216ENST00000498644 RAB3GAP2Q9H2M9 1393 aa24.89■■□□□ 1.57
MTA1-216ENST00000498644 PTCH1Q13635 1447 aa24.88■■□□□ 1.57
MTA1-216ENST00000498644 ADGRL3Q9HAR2 1447 aa24.88■■□□□ 1.57
MTA1-216ENST00000498644 ANKRD30BQ9BXX2 1392 aa24.88■■□□□ 1.57
MTA1-216ENST00000498644 JCADQ9P266 1359 aa24.88■■□□□ 1.57
MTA1-216ENST00000498644 PRAG1Q86YV5 1406 aa24.87■■□□□ 1.57
MTA1-216ENST00000498644 COL16A1Q07092 1604 aaPredicted RBP24.87■■□□□ 1.57
MTA1-216ENST00000498644 AHDC1Q5TGY3 1603 aaPredicted RBP24.87■■□□□ 1.57
MTA1-216ENST00000498644 BRINP3Q76B58 766 aa24.86■■□□□ 1.57
MTA1-216ENST00000498644 MST1RQ04912 1400 aa24.86■■□□□ 1.57
MTA1-216ENST00000498644 ADGRF5Q8IZF2 1346 aa24.86■■□□□ 1.57
MTA1-216ENST00000498644 IFT172Q9UG01 1749 aa24.85■■□□□ 1.57
MTA1-216ENST00000498644 NALCNQ8IZF0 1738 aa24.84■■□□□ 1.57
MTA1-216ENST00000498644 ROBO2Q9HCK4 1378 aa24.83■■□□□ 1.57
MTA1-216ENST00000498644 RGS17Q9UGC6 210 aaPredicted RBP24.82■■□□□ 1.56
MTA1-216ENST00000498644 HRCP23327 699 aa24.81■■□□□ 1.56
MTA1-216ENST00000498644 ASXL1Q8IXJ9 1541 aa24.8■■□□□ 1.56
MTA1-216ENST00000498644 SPATA31A6Q5VVP1 1343 aa24.78■■□□□ 1.56
MTA1-216ENST00000498644 PIK3C2GO75747 1445 aa24.77■■□□□ 1.56
MTA1-216ENST00000498644 SHPRHQ149N8 1683 aa24.75■■□□□ 1.55
MTA1-216ENST00000498644 NHSL1Q5SYE7 1610 aa24.75■■□□□ 1.55
MTA1-216ENST00000498644 C1orf167Q5SNV9 1468 aa24.74■■□□□ 1.55
MTA1-216ENST00000498644 LRPPRCP42704 1394 aaKnown RBP24.73■■□□□ 1.55
MTA1-216ENST00000498644 TECPR2O15040 1411 aa24.72■■□□□ 1.55
MTA1-216ENST00000498644 ABCC11Q96J66 1382 aa24.72■■□□□ 1.55
MTA1-216ENST00000498644 TMEM132EQ6IEE7 984 aa24.71■■□□□ 1.55
MTA1-216ENST00000498644 LRRC59Q96AG4 307 aaKnown RBP24.71■■□□□ 1.55
MTA1-216ENST00000498644 STK26Q9P289 416 aa24.71■■□□□ 1.55
MTA1-216ENST00000498644 MYOM2P54296 1465 aa24.7■■□□□ 1.55
MTA1-216ENST00000498644 C14orf93Q9H972 538 aaKnown RBP24.7■■□□□ 1.54
MTA1-216ENST00000498644 NRXN1Q9ULB1 1477 aa24.7■■□□□ 1.54
MTA1-216ENST00000498644 POTEAQ6S8J7 498 aa24.68■■□□□ 1.54
MTA1-216ENST00000498644 KNDC1Q76NI1 1749 aa24.68■■□□□ 1.54
MTA1-216ENST00000498644 LRP6O75581 1613 aa24.68■■□□□ 1.54
MTA1-216ENST00000498644 LAMC1P11047 1609 aa24.67■■□□□ 1.54
MTA1-216ENST00000498644 YTHDC2Q9H6S0 1430 aaKnown RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms