RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 ANKLE2Q86XL3 938 aa16.58■□□□□ 0.24
CTTN-208ENST00000498223 PPLO60437 1756 aa16.56■□□□□ 0.24
CTTN-208ENST00000498223 POLR1AO95602 1720 aaPredicted RBP16.56■□□□□ 0.24
CTTN-208ENST00000498223 NEURL4Q96JN8 1562 aa16.56■□□□□ 0.24
CTTN-208ENST00000498223 CLSPNQ9HAW4 1339 aa16.56■□□□□ 0.24
CTTN-208ENST00000498223 PPP1R15AO75807 674 aaPredicted RBP16.54■□□□□ 0.24
CTTN-208ENST00000498223 HDGFP51858 240 aaKnown RBP16.54■□□□□ 0.24
CTTN-208ENST00000498223 EID1Q9Y6B2 187 aa16.54■□□□□ 0.24
CTTN-208ENST00000498223 MED14O60244 1454 aa16.54■□□□□ 0.24
CTTN-208ENST00000498223 NUTM2DQ5VT03 806 aaPredicted RBP16.53■□□□□ 0.24
CTTN-208ENST00000498223 IFT172Q9UG01 1749 aa16.53■□□□□ 0.24
CTTN-208ENST00000498223 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
CTTN-208ENST00000498223 TONSLQ96HA7 1378 aa16.52■□□□□ 0.24
CTTN-208ENST00000498223 UBAP1LF5GYI3 381 aa16.52■□□□□ 0.24
CTTN-208ENST00000498223 TXNDC2Q86VQ3 553 aa16.52■□□□□ 0.24
CTTN-208ENST00000498223 BCANQ96GW7 911 aa16.52■□□□□ 0.24
CTTN-208ENST00000498223 NPHP4O75161 1426 aaPredicted RBP16.52■□□□□ 0.23
CTTN-208ENST00000498223 SPATA31E1Q6ZUB1 1445 aa16.52■□□□□ 0.23
CTTN-208ENST00000498223 TMEM2Q9UHN6 1383 aa16.51■□□□□ 0.23
CTTN-208ENST00000498223 CPS1P31327 1500 aa16.51■□□□□ 0.23
CTTN-208ENST00000498223 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.51■□□□□ 0.23
CTTN-208ENST00000498223 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
CTTN-208ENST00000498223 KDM2AQ9Y2K7 1162 aa16.51■□□□□ 0.23
CTTN-208ENST00000498223 SLIT1O75093 1534 aa16.5■□□□□ 0.23
CTTN-208ENST00000498223 RPGRIP1LQ68CZ1 1315 aa16.5■□□□□ 0.23
CTTN-208ENST00000498223 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
CTTN-208ENST00000498223 NEXMIFQ5QGS0 1516 aa16.5■□□□□ 0.23
CTTN-208ENST00000498223 ARHGAP23Q9P227 1491 aa16.48■□□□□ 0.23
CTTN-208ENST00000498223 SCAF11Q99590 1463 aaKnown RBP16.48■□□□□ 0.23
CTTN-208ENST00000498223 VGFO15240 615 aaPredicted RBP16.47■□□□□ 0.23
CTTN-208ENST00000498223 ZFYVE9O95405 1425 aa16.46■□□□□ 0.23
CTTN-208ENST00000498223 LTKP29376 864 aa16.46■□□□□ 0.23
CTTN-208ENST00000498223 L3MBTL2Q969R5 705 aa16.46■□□□□ 0.23
CTTN-208ENST00000498223 DISP3Q9P2K9 1392 aa16.45■□□□□ 0.22
CTTN-208ENST00000498223 IQGAP1P46940 1657 aa16.45■□□□□ 0.22
CTTN-208ENST00000498223 TOM1O60784 492 aa16.42■□□□□ 0.22
CTTN-208ENST00000498223 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
CTTN-208ENST00000498223 ADGRF5Q8IZF2 1346 aa16.41■□□□□ 0.22
CTTN-208ENST00000498223 MYOM2P54296 1465 aa16.41■□□□□ 0.22
CTTN-208ENST00000498223 PLEKHG1Q9ULL1 1385 aa16.4■□□□□ 0.22
CTTN-208ENST00000498223 TIMELESSQ9UNS1 1208 aa16.4■□□□□ 0.22
CTTN-208ENST00000498223 SLC26A8Q96RN1 970 aa16.38■□□□□ 0.21
CTTN-208ENST00000498223 PIP4K2BP78356 416 aa16.37■□□□□ 0.21
CTTN-208ENST00000498223 SETBP1Q9Y6X0 1596 aa16.37■□□□□ 0.21
CTTN-208ENST00000498223 SCAF1Q9H7N4 1312 aaKnown RBP16.37■□□□□ 0.21
CTTN-208ENST00000498223 LAMC1P11047 1609 aa16.37■□□□□ 0.21
CTTN-208ENST00000498223 LRRC7Q96NW7 1537 aa16.36■□□□□ 0.21
CTTN-208ENST00000498223 ALKQ9UM73 1620 aa16.36■□□□□ 0.21
CTTN-208ENST00000498223 NRXN3Q9Y4C0 1643 aa16.36■□□□□ 0.21
CTTN-208ENST00000498223 PIK3C2GO75747 1445 aa16.35■□□□□ 0.21
CTTN-208ENST00000498223 DIP2AQ14689 1571 aa16.34■□□□□ 0.21
CTTN-208ENST00000498223 KIAA1210Q9ULL0 1709 aa16.34■□□□□ 0.21
CTTN-208ENST00000498223 PRAG1Q86YV5 1406 aa16.34■□□□□ 0.21
CTTN-208ENST00000498223 HSPA1LP34931 641 aa16.33■□□□□ 0.2
CTTN-208ENST00000498223 CFAP70Q5T0N1 1121 aa16.33■□□□□ 0.2
CTTN-208ENST00000498223 ILDR2Q71H61 639 aa16.33■□□□□ 0.2
CTTN-208ENST00000498223 NRXN1Q9ULB1 1477 aa16.33■□□□□ 0.2
CTTN-208ENST00000498223 TRPM1Q7Z4N2 1603 aa16.33■□□□□ 0.2
CTTN-208ENST00000498223 SETD1AO15047 1707 aaKnown RBP16.33■□□□□ 0.2
CTTN-208ENST00000498223 CHD2O14647 1828 aaKnown RBP16.33■□□□□ 0.2
CTTN-208ENST00000498223 TBX22Q9Y458 520 aa16.32■□□□□ 0.2
CTTN-208ENST00000498223 ADAMTS13Q76LX8 1427 aa16.31■□□□□ 0.2
CTTN-208ENST00000498223 NBPF8Q3BBV2 869 aa16.31■□□□□ 0.2
CTTN-208ENST00000498223 C14orf93Q9H972 538 aaKnown RBP16.31■□□□□ 0.2
CTTN-208ENST00000498223 STRCP1A6NGW2 1772 aa16.31■□□□□ 0.2
CTTN-208ENST00000498223 ZEB1P37275 1124 aaPredicted RBP16.29■□□□□ 0.2
CTTN-208ENST00000498223 TMEM132EQ6IEE7 984 aa16.29■□□□□ 0.2
CTTN-208ENST00000498223 ROCK2O75116 1388 aaKnown RBP16.27■□□□□ 0.2
CTTN-208ENST00000498223 METP08581 1390 aa16.27■□□□□ 0.2
CTTN-208ENST00000498223 STK26Q9P289 416 aa16.27■□□□□ 0.2
CTTN-208ENST00000498223 KCNA6P17658 529 aa16.26■□□□□ 0.19
CTTN-208ENST00000498223 NBPF1Q3BBV0 1214 aa16.26■□□□□ 0.19
CTTN-208ENST00000498223 SOCS7O14512 581 aa16.25■□□□□ 0.19
CTTN-208ENST00000498223 PIK3R4Q99570 1358 aa16.25■□□□□ 0.19
CTTN-208ENST00000498223 RALGAPBQ86X10 1494 aa16.24■□□□□ 0.19
CTTN-208ENST00000498223 AMOTL2Q9Y2J4 779 aa16.24■□□□□ 0.19
CTTN-208ENST00000498223 ASXL1Q8IXJ9 1541 aa16.24■□□□□ 0.19
CTTN-208ENST00000498223 KNDC1Q76NI1 1749 aa16.23■□□□□ 0.19
CTTN-208ENST00000498223 CARD11Q9BXL7 1154 aa16.23■□□□□ 0.19
CTTN-208ENST00000498223 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
CTTN-208ENST00000498223 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
CTTN-208ENST00000498223 TRAK1Q9UPV9 953 aa16.22■□□□□ 0.19
CTTN-208ENST00000498223 XRN1Q8IZH2 1706 aaKnown RBP16.22■□□□□ 0.19
CTTN-208ENST00000498223 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
CTTN-208ENST00000498223 PTPRUQ92729 1446 aa16.21■□□□□ 0.19
CTTN-208ENST00000498223 ADGRB1O14514 1584 aa16.21■□□□□ 0.18
CTTN-208ENST00000498223 NWD1Q149M9 1564 aa16.21■□□□□ 0.18
CTTN-208ENST00000498223 ARHGEF28Q8N1W1 1705 aaKnown RBP16.2■□□□□ 0.18
CTTN-208ENST00000498223 PROSER2Q86WR7 435 aaPredicted RBP16.2■□□□□ 0.18
CTTN-208ENST00000498223 LRPPRCP42704 1394 aaKnown RBP16.2■□□□□ 0.18
CTTN-208ENST00000498223 MED1Q15648 1581 aaPredicted RBP16.2■□□□□ 0.18
CTTN-208ENST00000498223 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
CTTN-208ENST00000498223 POGKQ9P215 609 aa16.18■□□□□ 0.18
CTTN-208ENST00000498223 FAM135BQ49AJ0 1406 aa16.18■□□□□ 0.18
CTTN-208ENST00000498223 ABCC11Q96J66 1382 aa16.16■□□□□ 0.18
CTTN-208ENST00000498223 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
CTTN-208ENST00000498223 XIRP1Q702N8 1843 aaKnown RBP16.16■□□□□ 0.18
CTTN-208ENST00000498223 EIF3AQ14152 1382 aaKnown RBP16.15■□□□□ 0.18
CTTN-208ENST00000498223 QRICH2Q9H0J4 1663 aa16.15■□□□□ 0.18
CTTN-208ENST00000498223 RBM33Q96EV2 1170 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms