RNA–Protein interactions for RNA: ENST00000497762.1

ATP13A1-215, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-215ENST00000497762 RIMS2Q9UQ26 1411 aa18.67■□□□□ 0.58
ATP13A1-215ENST00000497762 SLC26A8Q96RN1 970 aa18.67■□□□□ 0.58
ATP13A1-215ENST00000497762 NWD1Q149M9 1564 aa18.65■□□□□ 0.58
ATP13A1-215ENST00000497762 CHGAP10645 457 aaKnown RBP18.65■□□□□ 0.58
ATP13A1-215ENST00000497762 TOM1O60784 492 aa18.64■□□□□ 0.57
ATP13A1-215ENST00000497762 DISP3Q9P2K9 1392 aa18.64■□□□□ 0.57
ATP13A1-215ENST00000497762 NUTM2DQ5VT03 806 aaPredicted RBP18.62■□□□□ 0.57
ATP13A1-215ENST00000497762 BCANQ96GW7 911 aa18.62■□□□□ 0.57
ATP13A1-215ENST00000497762 PLEKHG1Q9ULL1 1385 aa18.62■□□□□ 0.57
ATP13A1-215ENST00000497762 CLTCL1P53675 1640 aa18.62■□□□□ 0.57
ATP13A1-215ENST00000497762 CHD2O14647 1828 aaKnown RBP18.61■□□□□ 0.57
ATP13A1-215ENST00000497762 HFM1A2PYH4 1435 aa18.61■□□□□ 0.57
ATP13A1-215ENST00000497762 PPP1R15AO75807 674 aaPredicted RBP18.61■□□□□ 0.57
ATP13A1-215ENST00000497762 HSPA1LP34931 641 aa18.61■□□□□ 0.57
ATP13A1-215ENST00000497762 RBM33Q96EV2 1170 aaKnown RBP18.59■□□□□ 0.57
ATP13A1-215ENST00000497762 NKTRP30414 1462 aaKnown RBP18.58■□□□□ 0.57
ATP13A1-215ENST00000497762 TMEM94Q12767 1356 aa18.58■□□□□ 0.57
ATP13A1-215ENST00000497762 TRPM2O94759 1503 aa18.58■□□□□ 0.56
ATP13A1-215ENST00000497762 KCNA6P17658 529 aa18.57■□□□□ 0.56
ATP13A1-215ENST00000497762 ADAMTS13Q76LX8 1427 aa18.56■□□□□ 0.56
ATP13A1-215ENST00000497762 NRXN3Q9Y4C0 1643 aa18.56■□□□□ 0.56
ATP13A1-215ENST00000497762 KIF1BO60333 1816 aa18.56■□□□□ 0.56
ATP13A1-215ENST00000497762 DIP2AQ14689 1571 aa18.55■□□□□ 0.56
ATP13A1-215ENST00000497762 MED1Q15648 1581 aaPredicted RBP18.54■□□□□ 0.56
ATP13A1-215ENST00000497762 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
ATP13A1-215ENST00000497762 TRIM52Q96A61 297 aa18.53■□□□□ 0.56
ATP13A1-215ENST00000497762 ILDR2Q71H61 639 aa18.52■□□□□ 0.56
ATP13A1-215ENST00000497762 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.52■□□□□ 0.56
ATP13A1-215ENST00000497762 ROBO1Q9Y6N7 1651 aa18.51■□□□□ 0.55
ATP13A1-215ENST00000497762 NEXMIFQ5QGS0 1516 aa18.51■□□□□ 0.55
ATP13A1-215ENST00000497762 HDGFP51858 240 aaKnown RBP18.51■□□□□ 0.55
ATP13A1-215ENST00000497762 SETBP1Q9Y6X0 1596 aa18.5■□□□□ 0.55
ATP13A1-215ENST00000497762 ZNF326Q5BKZ1 582 aaKnown RBP18.49■□□□□ 0.55
ATP13A1-215ENST00000497762 TBX22Q9Y458 520 aa18.48■□□□□ 0.55
ATP13A1-215ENST00000497762 XRN1Q8IZH2 1706 aaKnown RBP18.47■□□□□ 0.55
ATP13A1-215ENST00000497762 PTPRUQ92729 1446 aa18.47■□□□□ 0.55
ATP13A1-215ENST00000497762 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
ATP13A1-215ENST00000497762 MSH6P52701 1360 aa18.45■□□□□ 0.54
ATP13A1-215ENST00000497762 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.44■□□□□ 0.54
ATP13A1-215ENST00000497762 FOXD1Q16676 465 aa18.44■□□□□ 0.54
ATP13A1-215ENST00000497762 PPLO60437 1756 aa18.43■□□□□ 0.54
ATP13A1-215ENST00000497762 SETD1AO15047 1707 aaKnown RBP18.43■□□□□ 0.54
ATP13A1-215ENST00000497762 PIK3R4Q99570 1358 aa18.42■□□□□ 0.54
ATP13A1-215ENST00000497762 FAM135BQ49AJ0 1406 aa18.42■□□□□ 0.54
ATP13A1-215ENST00000497762 METP08581 1390 aa18.41■□□□□ 0.54
ATP13A1-215ENST00000497762 PHLPP1O60346 1717 aa18.4■□□□□ 0.54
ATP13A1-215ENST00000497762 C14orf37Q86TY3 774 aa18.39■□□□□ 0.53
ATP13A1-215ENST00000497762 AMOTL2Q9Y2J4 779 aa18.39■□□□□ 0.53
ATP13A1-215ENST00000497762 NALCNQ8IZF0 1738 aa18.37■□□□□ 0.53
ATP13A1-215ENST00000497762 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
ATP13A1-215ENST00000497762 NCOA3Q9Y6Q9 1424 aa18.36■□□□□ 0.53
ATP13A1-215ENST00000497762 SLAIN2Q9P270 581 aa18.35■□□□□ 0.53
ATP13A1-215ENST00000497762 CCDC144AA2RUR9 1427 aa18.34■□□□□ 0.53
ATP13A1-215ENST00000497762 SETD5Q9C0A6 1442 aa18.34■□□□□ 0.53
ATP13A1-215ENST00000497762 COL16A1Q07092 1604 aaPredicted RBP18.34■□□□□ 0.53
ATP13A1-215ENST00000497762 MPHOSPH9Q99550 1183 aa18.33■□□□□ 0.52
ATP13A1-215ENST00000497762 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
ATP13A1-215ENST00000497762 SPATA31E1Q6ZUB1 1445 aa18.31■□□□□ 0.52
ATP13A1-215ENST00000497762 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
ATP13A1-215ENST00000497762 C19orf44Q9H6X5 657 aa18.3■□□□□ 0.52
ATP13A1-215ENST00000497762 SOCS7O14512 581 aa18.29■□□□□ 0.52
ATP13A1-215ENST00000497762 ATF3P18847 181 aa18.29■□□□□ 0.52
ATP13A1-215ENST00000497762 AHDC1Q5TGY3 1603 aaPredicted RBP18.28■□□□□ 0.52
ATP13A1-215ENST00000497762 VGFO15240 615 aaPredicted RBP18.28■□□□□ 0.52
ATP13A1-215ENST00000497762 CADPS2Q86UW7 1296 aa18.28■□□□□ 0.52
ATP13A1-215ENST00000497762 DCCP43146 1447 aa18.28■□□□□ 0.52
ATP13A1-215ENST00000497762 ADGRL3Q9HAR2 1447 aa18.28■□□□□ 0.52
ATP13A1-215ENST00000497762 RPGRIP1LQ68CZ1 1315 aa18.27■□□□□ 0.52
ATP13A1-215ENST00000497762 RGL3Q3MIN7 710 aa18.27■□□□□ 0.52
ATP13A1-215ENST00000497762 MST1RQ04912 1400 aa18.26■□□□□ 0.51
ATP13A1-215ENST00000497762 PTCH1Q13635 1447 aa18.26■□□□□ 0.51
ATP13A1-215ENST00000497762 ASXL1Q8IXJ9 1541 aa18.26■□□□□ 0.51
ATP13A1-215ENST00000497762 ROBO2Q9HCK4 1378 aa18.26■□□□□ 0.51
ATP13A1-215ENST00000497762 ADGRF5Q8IZF2 1346 aa18.25■□□□□ 0.51
ATP13A1-215ENST00000497762 NHSL1Q5SYE7 1610 aa18.24■□□□□ 0.51
ATP13A1-215ENST00000497762 SHPRHQ149N8 1683 aa18.23■□□□□ 0.51
ATP13A1-215ENST00000497762 BRINP3Q76B58 766 aa18.23■□□□□ 0.51
ATP13A1-215ENST00000497762 JCADQ9P266 1359 aa18.22■□□□□ 0.51
ATP13A1-215ENST00000497762 PRAG1Q86YV5 1406 aa18.22■□□□□ 0.51
ATP13A1-215ENST00000497762 RGS17Q9UGC6 210 aaPredicted RBP18.21■□□□□ 0.51
ATP13A1-215ENST00000497762 LRP6O75581 1613 aa18.2■□□□□ 0.5
ATP13A1-215ENST00000497762 PIK3C2GO75747 1445 aa18.2■□□□□ 0.5
ATP13A1-215ENST00000497762 KNDC1Q76NI1 1749 aa18.2■□□□□ 0.5
ATP13A1-215ENST00000497762 ANKRD30BQ9BXX2 1392 aa18.19■□□□□ 0.5
ATP13A1-215ENST00000497762 DDX17Q92841 729 aaKnown RBP18.17■□□□□ 0.5
ATP13A1-215ENST00000497762 C1orf167Q5SNV9 1468 aa18.16■□□□□ 0.5
ATP13A1-215ENST00000497762 CDC42BPGQ6DT37 1551 aa18.16■□□□□ 0.5
ATP13A1-215ENST00000497762 MYOM2P54296 1465 aa18.15■□□□□ 0.5
ATP13A1-215ENST00000497762 TMEM132EQ6IEE7 984 aa18.15■□□□□ 0.5
ATP13A1-215ENST00000497762 STK26Q9P289 416 aa18.15■□□□□ 0.5
ATP13A1-215ENST00000497762 ACIN1Q9UKV3 1341 aaKnown RBP18.15■□□□□ 0.5
ATP13A1-215ENST00000497762 LAMC1P11047 1609 aa18.15■□□□□ 0.5
ATP13A1-215ENST00000497762 NRXN1Q9ULB1 1477 aa18.14■□□□□ 0.5
ATP13A1-215ENST00000497762 TECPR2O15040 1411 aa18.14■□□□□ 0.49
ATP13A1-215ENST00000497762 PLEKHH1Q9ULM0 1364 aa18.13■□□□□ 0.49
ATP13A1-215ENST00000497762 POTEAQ6S8J7 498 aa18.12■□□□□ 0.49
ATP13A1-215ENST00000497762 LRPPRCP42704 1394 aaKnown RBP18.12■□□□□ 0.49
ATP13A1-215ENST00000497762 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
ATP13A1-215ENST00000497762 YTHDC2Q9H6S0 1430 aaKnown RBP18.11■□□□□ 0.49
ATP13A1-215ENST00000497762 SPATA31A6Q5VVP1 1343 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms