RNA–Protein interactions for RNA: ENST00000497754.1

TMEM164-208, Transcript of transmembrane protein 164, human

TSL 2

Gene TMEM164, Length 236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM164-208	ENST00000497754	NUP155	O75694	1391 aa		33.44	■■■□□ 2.94
TMEM164-208	ENST00000497754	SLC26A8	Q96RN1	970 aa		33.41	■■■□□ 2.94
TMEM164-208	ENST00000497754	NWD1	Q149M9	1564 aa		33.41	■■■□□ 2.94
TMEM164-208	ENST00000497754	RIMS2	Q9UQ26	1411 aa		33.4	■■■□□ 2.94
TMEM164-208	ENST00000497754	KCNA6	P17658	529 aa		33.39	■■■□□ 2.94
TMEM164-208	ENST00000497754	PLEKHG1	Q9ULL1	1385 aa		33.37	■■■□□ 2.93
TMEM164-208	ENST00000497754	NKTR	P30414	1462 aa	Known RBP	33.34	■■■□□ 2.93
TMEM164-208	ENST00000497754	CHD2	O14647	1828 aa	Known RBP	33.34	■■■□□ 2.93
TMEM164-208	ENST00000497754	SPHKAP	Q2M3C7	1700 aa		33.33	■■■□□ 2.93
TMEM164-208	ENST00000497754	TMEM94	Q12767	1356 aa		33.33	■■■□□ 2.93
TMEM164-208	ENST00000497754	HDGF	P51858	240 aa	Known RBP	33.32	■■■□□ 2.92
TMEM164-208	ENST00000497754	MED1	Q15648	1581 aa	Predicted RBP	33.31	■■■□□ 2.92
TMEM164-208	ENST00000497754	PPP1R15A	O75807	674 aa	Predicted RBP	33.29	■■■□□ 2.92
TMEM164-208	ENST00000497754	CHGA	P10645	457 aa	Known RBP	33.29	■■■□□ 2.92
TMEM164-208	ENST00000497754	BCAN	Q96GW7	911 aa		33.29	■■■□□ 2.92
TMEM164-208	ENST00000497754	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.27	■■■□□ 2.92
TMEM164-208	ENST00000497754	NAIP	Q13075	1403 aa		33.27	■■■□□ 2.92
TMEM164-208	ENST00000497754	SENP3	Q9H4L4	574 aa	Predicted RBP	33.26	■■■□□ 2.91
TMEM164-208	ENST00000497754	PROSER2	Q86WR7	435 aa	Predicted RBP	33.25	■■■□□ 2.91
TMEM164-208	ENST00000497754	DIP2A	Q14689	1571 aa		33.23	■■■□□ 2.91
TMEM164-208	ENST00000497754	ADAMTS13	Q76LX8	1427 aa		33.22	■■■□□ 2.91
TMEM164-208	ENST00000497754	TBX22	Q9Y458	520 aa		33.22	■■■□□ 2.91
TMEM164-208	ENST00000497754	RBM33	Q96EV2	1170 aa	Known RBP	33.21	■■■□□ 2.91
TMEM164-208	ENST00000497754	FAM135B	Q49AJ0	1406 aa		33.19	■■■□□ 2.9
TMEM164-208	ENST00000497754	SOCS7	O14512	581 aa		33.19	■■■□□ 2.9
TMEM164-208	ENST00000497754	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.19	■■■□□ 2.9
TMEM164-208	ENST00000497754	HFM1	A2PYH4	1435 aa		33.16	■■■□□ 2.9
TMEM164-208	ENST00000497754	ROBO1	Q9Y6N7	1651 aa		33.16	■■■□□ 2.9
TMEM164-208	ENST00000497754	CLTCL1	P53675	1640 aa		33.15	■■■□□ 2.9
TMEM164-208	ENST00000497754	TRPM2	O94759	1503 aa		33.14	■■■□□ 2.9
TMEM164-208	ENST00000497754	PIK3R4	Q99570	1358 aa		33.13	■■■□□ 2.89
TMEM164-208	ENST00000497754	NRXN3	Q9Y4C0	1643 aa		33.13	■■■□□ 2.89
TMEM164-208	ENST00000497754	MSH6	P52701	1360 aa		33.12	■■■□□ 2.89
TMEM164-208	ENST00000497754	KIF1B	O60333	1816 aa		33.09	■■■□□ 2.89
TMEM164-208	ENST00000497754	NCOA3	Q9Y6Q9	1424 aa		33.09	■■■□□ 2.89
TMEM164-208	ENST00000497754	SETBP1	Q9Y6X0	1596 aa		33.09	■■■□□ 2.89
TMEM164-208	ENST00000497754	NEXMIF	Q5QGS0	1516 aa		33.04	■■■□□ 2.88
TMEM164-208	ENST00000497754	PTPRU	Q92729	1446 aa		33.03	■■■□□ 2.88
TMEM164-208	ENST00000497754	XRN1	Q8IZH2	1706 aa	Known RBP	33.02	■■■□□ 2.88
TMEM164-208	ENST00000497754	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.02	■■■□□ 2.88
TMEM164-208	ENST00000497754	ZNF326	Q5BKZ1	582 aa	Known RBP	33.01	■■■□□ 2.87
TMEM164-208	ENST00000497754	SLAIN2	Q9P270	581 aa		33	■■■□□ 2.87
TMEM164-208	ENST00000497754	TRIM52	Q96A61	297 aa		32.99	■■■□□ 2.87
TMEM164-208	ENST00000497754	PHF23	Q9BUL5	403 aa	Predicted RBP	32.97	■■■□□ 2.87
TMEM164-208	ENST00000497754	AMOTL2	Q9Y2J4	779 aa		32.97	■■■□□ 2.87
TMEM164-208	ENST00000497754	PHLPP1	O60346	1717 aa		32.96	■■■□□ 2.87
TMEM164-208	ENST00000497754	C14orf37	Q86TY3	774 aa		32.92	■■■□□ 2.86
TMEM164-208	ENST00000497754	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.92	■■■□□ 2.86
TMEM164-208	ENST00000497754	C19orf44	Q9H6X5	657 aa		32.92	■■■□□ 2.86
TMEM164-208	ENST00000497754	MET	P08581	1390 aa		32.91	■■■□□ 2.86
TMEM164-208	ENST00000497754	CADPS2	Q86UW7	1296 aa		32.88	■■■□□ 2.85
TMEM164-208	ENST00000497754	SETD1A	O15047	1707 aa	Known RBP	32.87	■■■□□ 2.85
TMEM164-208	ENST00000497754	COL16A1	Q07092	1604 aa	Predicted RBP	32.87	■■■□□ 2.85
TMEM164-208	ENST00000497754	PPL	O60437	1756 aa		32.86	■■■□□ 2.85
TMEM164-208	ENST00000497754	ATF3	P18847	181 aa		32.84	■■■□□ 2.85
TMEM164-208	ENST00000497754	DCC	P43146	1447 aa		32.84	■■■□□ 2.85
TMEM164-208	ENST00000497754	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.81	■■■□□ 2.84
TMEM164-208	ENST00000497754	RGS17	Q9UGC6	210 aa	Predicted RBP	32.81	■■■□□ 2.84
TMEM164-208	ENST00000497754	RPGRIP1L	Q68CZ1	1315 aa		32.79	■■■□□ 2.84
TMEM164-208	ENST00000497754	VGF	O15240	615 aa	Predicted RBP	32.79	■■■□□ 2.84
TMEM164-208	ENST00000497754	JCAD	Q9P266	1359 aa		32.78	■■■□□ 2.84
TMEM164-208	ENST00000497754	NALCN	Q8IZF0	1738 aa		32.77	■■■□□ 2.84
TMEM164-208	ENST00000497754	FOXD1	Q16676	465 aa		32.77	■■■□□ 2.84
TMEM164-208	ENST00000497754	ADGRL3	Q9HAR2	1447 aa		32.74	■■■□□ 2.83
TMEM164-208	ENST00000497754	MST1R	Q04912	1400 aa		32.73	■■■□□ 2.83
TMEM164-208	ENST00000497754	PTCH1	Q13635	1447 aa		32.71	■■■□□ 2.83
TMEM164-208	ENST00000497754	BRINP3	Q76B58	766 aa		32.71	■■■□□ 2.83
TMEM164-208	ENST00000497754	MPHOSPH9	Q99550	1183 aa		32.71	■■■□□ 2.83
TMEM164-208	ENST00000497754	SHPRH	Q149N8	1683 aa		32.71	■■■□□ 2.83
TMEM164-208	ENST00000497754	CCDC144A	A2RUR9	1427 aa		32.7	■■■□□ 2.83
TMEM164-208	ENST00000497754	PRAG1	Q86YV5	1406 aa		32.7	■■■□□ 2.83
TMEM164-208	ENST00000497754	IFT172	Q9UG01	1749 aa		32.7	■■■□□ 2.83
TMEM164-208	ENST00000497754	ASXL1	Q8IXJ9	1541 aa		32.7	■■■□□ 2.83
TMEM164-208	ENST00000497754	NHSL1	Q5SYE7	1610 aa		32.68	■■■□□ 2.82
TMEM164-208	ENST00000497754	SPATA31E1	Q6ZUB1	1445 aa		32.68	■■■□□ 2.82
TMEM164-208	ENST00000497754	SETD5	Q9C0A6	1442 aa		32.64	■■■□□ 2.82
TMEM164-208	ENST00000497754	ROBO2	Q9HCK4	1378 aa		32.64	■■■□□ 2.82
TMEM164-208	ENST00000497754	LRP6	O75581	1613 aa		32.62	■■■□□ 2.81
TMEM164-208	ENST00000497754	SPATA31A6	Q5VVP1	1343 aa		32.62	■■■□□ 2.81
TMEM164-208	ENST00000497754	ACIN1	Q9UKV3	1341 aa	Known RBP	32.62	■■■□□ 2.81
TMEM164-208	ENST00000497754	POTEA	Q6S8J7	498 aa		32.61	■■■□□ 2.81
TMEM164-208	ENST00000497754	ADGRF5	Q8IZF2	1346 aa		32.58	■■■□□ 2.81
TMEM164-208	ENST00000497754	ANKRD30B	Q9BXX2	1392 aa		32.57	■■■□□ 2.8
TMEM164-208	ENST00000497754	RGL3	Q3MIN7	710 aa		32.56	■■■□□ 2.8
TMEM164-208	ENST00000497754	C1orf167	Q5SNV9	1468 aa		32.54	■■■□□ 2.8
TMEM164-208	ENST00000497754	LAMC1	P11047	1609 aa		32.54	■■■□□ 2.8
TMEM164-208	ENST00000497754	RAB3GAP2	Q9H2M9	1393 aa		32.51	■■■□□ 2.79
TMEM164-208	ENST00000497754	PIK3C2G	O75747	1445 aa		32.51	■■■□□ 2.79
TMEM164-208	ENST00000497754	KNDC1	Q76NI1	1749 aa		32.5	■■■□□ 2.79
TMEM164-208	ENST00000497754	TECPR2	O15040	1411 aa		32.48	■■■□□ 2.79
TMEM164-208	ENST00000497754	DDX17	Q92841	729 aa	Known RBP	32.47	■■■□□ 2.79
TMEM164-208	ENST00000497754	CDC42BPG	Q6DT37	1551 aa		32.46	■■■□□ 2.79
TMEM164-208	ENST00000497754	MEX3C	Q5U5Q3	659 aa	Known RBP	32.45	■■■□□ 2.79
TMEM164-208	ENST00000497754	LRRC59	Q96AG4	307 aa	Known RBP	32.45	■■■□□ 2.79
TMEM164-208	ENST00000497754	LRPPRC	P42704	1394 aa	Known RBP	32.44	■■■□□ 2.78
TMEM164-208	ENST00000497754	NRXN1	Q9ULB1	1477 aa		32.42	■■■□□ 2.78
TMEM164-208	ENST00000497754	ORAI2	Q96SN7	254 aa		32.41	■■■□□ 2.78
TMEM164-208	ENST00000497754	PNPLA6	Q8IY17	1366 aa		32.41	■■■□□ 2.78
TMEM164-208	ENST00000497754	ABCC11	Q96J66	1382 aa		32.4	■■■□□ 2.78
TMEM164-208	ENST00000497754	MYOM2	P54296	1465 aa		32.4	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 183.9 ms