RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.81■■□□□ 1.4
CTDSP1-214ENST00000497677 PLEKHG1Q9ULL1 1385 aa23.79■■□□□ 1.4
CTDSP1-214ENST00000497677 NUTM2DQ5VT03 806 aaPredicted RBP23.79■■□□□ 1.4
CTDSP1-214ENST00000497677 ACIN1Q9UKV3 1341 aaKnown RBP23.79■■□□□ 1.4
CTDSP1-214ENST00000497677 TRPM2O94759 1503 aa23.79■■□□□ 1.4
CTDSP1-214ENST00000497677 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
CTDSP1-214ENST00000497677 SPHKAPQ2M3C7 1700 aa23.77■■□□□ 1.4
CTDSP1-214ENST00000497677 PPP1R15AO75807 674 aaPredicted RBP23.77■■□□□ 1.4
CTDSP1-214ENST00000497677 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
CTDSP1-214ENST00000497677 KCNA6P17658 529 aa23.74■■□□□ 1.39
CTDSP1-214ENST00000497677 BCANQ96GW7 911 aa23.74■■□□□ 1.39
CTDSP1-214ENST00000497677 TBX22Q9Y458 520 aa23.74■■□□□ 1.39
CTDSP1-214ENST00000497677 MYO5BQ9ULV0 1848 aa23.74■■□□□ 1.39
CTDSP1-214ENST00000497677 LRRC7Q96NW7 1537 aa23.73■■□□□ 1.39
CTDSP1-214ENST00000497677 CLTCL1P53675 1640 aa23.73■■□□□ 1.39
CTDSP1-214ENST00000497677 UBAP1LF5GYI3 381 aa23.72■■□□□ 1.39
CTDSP1-214ENST00000497677 HRCP23327 699 aa23.72■■□□□ 1.39
CTDSP1-214ENST00000497677 ZNF326Q5BKZ1 582 aaKnown RBP23.72■■□□□ 1.39
CTDSP1-214ENST00000497677 STRCP1A6NGW2 1772 aa23.71■■□□□ 1.39
CTDSP1-214ENST00000497677 ADAMTS13Q76LX8 1427 aa23.71■■□□□ 1.39
CTDSP1-214ENST00000497677 TRIM26Q12899 539 aaPredicted RBP23.7■■□□□ 1.38
CTDSP1-214ENST00000497677 TOM1O60784 492 aa23.64■■□□□ 1.37
CTDSP1-214ENST00000497677 RPGRIP1LQ68CZ1 1315 aa23.63■■□□□ 1.37
CTDSP1-214ENST00000497677 CCDC144AA2RUR9 1427 aa23.62■■□□□ 1.37
CTDSP1-214ENST00000497677 PROSER2Q86WR7 435 aaPredicted RBP23.62■■□□□ 1.37
CTDSP1-214ENST00000497677 NEXMIFQ5QGS0 1516 aa23.62■■□□□ 1.37
CTDSP1-214ENST00000497677 TMEM94Q12767 1356 aa23.62■■□□□ 1.37
CTDSP1-214ENST00000497677 PIK3R4Q99570 1358 aa23.61■■□□□ 1.37
CTDSP1-214ENST00000497677 VGFO15240 615 aaPredicted RBP23.6■■□□□ 1.37
CTDSP1-214ENST00000497677 RBM33Q96EV2 1170 aaKnown RBP23.6■■□□□ 1.37
CTDSP1-214ENST00000497677 SPATA31E1Q6ZUB1 1445 aa23.59■■□□□ 1.37
CTDSP1-214ENST00000497677 NWD1Q149M9 1564 aa23.59■■□□□ 1.37
CTDSP1-214ENST00000497677 ALKQ9UM73 1620 aa23.59■■□□□ 1.37
CTDSP1-214ENST00000497677 NKTRP30414 1462 aaKnown RBP23.58■■□□□ 1.37
CTDSP1-214ENST00000497677 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
CTDSP1-214ENST00000497677 PIP4K2BP78356 416 aa23.57■■□□□ 1.36
CTDSP1-214ENST00000497677 PTPRUQ92729 1446 aa23.57■■□□□ 1.36
CTDSP1-214ENST00000497677 DIP2AQ14689 1571 aa23.57■■□□□ 1.36
CTDSP1-214ENST00000497677 RGL3Q3MIN7 710 aa23.56■■□□□ 1.36
CTDSP1-214ENST00000497677 AMOTL2Q9Y2J4 779 aa23.56■■□□□ 1.36
CTDSP1-214ENST00000497677 METP08581 1390 aa23.55■■□□□ 1.36
CTDSP1-214ENST00000497677 ANKRD30BQ9BXX2 1392 aa23.55■■□□□ 1.36
CTDSP1-214ENST00000497677 NRXN3Q9Y4C0 1643 aa23.55■■□□□ 1.36
CTDSP1-214ENST00000497677 KIF1BO60333 1816 aa23.54■■□□□ 1.36
CTDSP1-214ENST00000497677 CHD2O14647 1828 aaKnown RBP23.52■■□□□ 1.36
CTDSP1-214ENST00000497677 ADGRF5Q8IZF2 1346 aa23.51■■□□□ 1.35
CTDSP1-214ENST00000497677 PCGF6Q9BYE7 350 aa23.5■■□□□ 1.35
CTDSP1-214ENST00000497677 SCAF1Q9H7N4 1312 aaKnown RBP23.5■■□□□ 1.35
CTDSP1-214ENST00000497677 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
CTDSP1-214ENST00000497677 NCOA3Q9Y6Q9 1424 aa23.49■■□□□ 1.35
CTDSP1-214ENST00000497677 HSPA1LP34931 641 aa23.48■■□□□ 1.35
CTDSP1-214ENST00000497677 MSH6P52701 1360 aa23.44■■□□□ 1.34
CTDSP1-214ENST00000497677 C19orf44Q9H6X5 657 aa23.43■■□□□ 1.34
CTDSP1-214ENST00000497677 PPLO60437 1756 aa23.42■■□□□ 1.34
CTDSP1-214ENST00000497677 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
CTDSP1-214ENST00000497677 XRN1Q8IZH2 1706 aaKnown RBP23.4■■□□□ 1.34
CTDSP1-214ENST00000497677 SLAIN2Q9P270 581 aa23.4■■□□□ 1.34
CTDSP1-214ENST00000497677 C14orf37Q86TY3 774 aa23.38■■□□□ 1.33
CTDSP1-214ENST00000497677 PIK3C2GO75747 1445 aa23.38■■□□□ 1.33
CTDSP1-214ENST00000497677 ROBO2Q9HCK4 1378 aa23.37■■□□□ 1.33
CTDSP1-214ENST00000497677 PRAG1Q86YV5 1406 aa23.36■■□□□ 1.33
CTDSP1-214ENST00000497677 C14orf93Q9H972 538 aaKnown RBP23.36■■□□□ 1.33
CTDSP1-214ENST00000497677 SETD1AO15047 1707 aaKnown RBP23.36■■□□□ 1.33
CTDSP1-214ENST00000497677 NRXN1Q9ULB1 1477 aa23.36■■□□□ 1.33
CTDSP1-214ENST00000497677 CADPS2Q86UW7 1296 aa23.35■■□□□ 1.33
CTDSP1-214ENST00000497677 PTCH1Q13635 1447 aa23.33■■□□□ 1.33
CTDSP1-214ENST00000497677 IFT172Q9UG01 1749 aa23.33■■□□□ 1.33
CTDSP1-214ENST00000497677 MYOM2P54296 1465 aa23.33■■□□□ 1.33
CTDSP1-214ENST00000497677 ATF3P18847 181 aa23.33■■□□□ 1.33
CTDSP1-214ENST00000497677 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.33
CTDSP1-214ENST00000497677 DHX57Q6P158 1386 aaKnown RBP23.32■■□□□ 1.32
CTDSP1-214ENST00000497677 CFAP70Q5T0N1 1121 aa23.32■■□□□ 1.32
CTDSP1-214ENST00000497677 LRPPRCP42704 1394 aaKnown RBP23.3■■□□□ 1.32
CTDSP1-214ENST00000497677 DCAF11Q8TEB1 546 aa23.3■■□□□ 1.32
CTDSP1-214ENST00000497677 DCCP43146 1447 aa23.3■■□□□ 1.32
CTDSP1-214ENST00000497677 ABCC11Q96J66 1382 aa23.29■■□□□ 1.32
CTDSP1-214ENST00000497677 STAC3Q96MF2 364 aa23.29■■□□□ 1.32
CTDSP1-214ENST00000497677 ADGRL3Q9HAR2 1447 aa23.29■■□□□ 1.32
CTDSP1-214ENST00000497677 KDM2AQ9Y2K7 1162 aa23.29■■□□□ 1.32
CTDSP1-214ENST00000497677 STK26Q9P289 416 aa23.28■■□□□ 1.32
CTDSP1-214ENST00000497677 ASXL1Q8IXJ9 1541 aa23.28■■□□□ 1.32
CTDSP1-214ENST00000497677 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.28■■□□□ 1.32
CTDSP1-214ENST00000497677 TECPR2O15040 1411 aa23.27■■□□□ 1.32
CTDSP1-214ENST00000497677 WAPLQ7Z5K2 1190 aa23.24■■□□□ 1.31
CTDSP1-214ENST00000497677 YTHDC2Q9H6S0 1430 aaKnown RBP23.24■■□□□ 1.31
CTDSP1-214ENST00000497677 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
CTDSP1-214ENST00000497677 SIRT1Q96EB6 747 aa23.23■■□□□ 1.31
CTDSP1-214ENST00000497677 MST1RQ04912 1400 aa23.23■■□□□ 1.31
CTDSP1-214ENST00000497677 ROBO1Q9Y6N7 1651 aa23.22■■□□□ 1.31
CTDSP1-214ENST00000497677 PLEKHH1Q9ULM0 1364 aa23.2■■□□□ 1.3
CTDSP1-214ENST00000497677 SIN3AQ96ST3 1273 aa23.2■■□□□ 1.3
CTDSP1-214ENST00000497677 DISP3Q9P2K9 1392 aa23.19■■□□□ 1.3
CTDSP1-214ENST00000497677 NALCNQ8IZF0 1738 aa23.16■■□□□ 1.3
CTDSP1-214ENST00000497677 ADGRB1O14514 1584 aa23.15■■□□□ 1.3
CTDSP1-214ENST00000497677 C1orf167Q5SNV9 1468 aa23.15■■□□□ 1.3
CTDSP1-214ENST00000497677 L3MBTL2Q969R5 705 aa23.13■■□□□ 1.29
CTDSP1-214ENST00000497677 LAMC1P11047 1609 aa23.12■■□□□ 1.29
CTDSP1-214ENST00000497677 PRAM1Q96QH2 718 aa23.12■■□□□ 1.29
CTDSP1-214ENST00000497677 ORAI2Q96SN7 254 aa23.12■■□□□ 1.29
CTDSP1-214ENST00000497677 NEUROD1Q13562 356 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms