RNA–Protein interactions for RNA: ENST00000497399.1

TCTN3-206, Transcript of tectonic family member 3, humanhuman

TSL 5

Gene TCTN3, Length 800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-206ENST00000497399 PIK3C2BO00750 1634 aa14.27□□□□□ -0.12
TCTN3-206ENST00000497399 CCDC144AA2RUR9 1427 aa14.27□□□□□ -0.12
TCTN3-206ENST00000497399 NPHP4O75161 1426 aaPredicted RBP14.26□□□□□ -0.13
TCTN3-206ENST00000497399 KIF1BO60333 1816 aa14.25□□□□□ -0.13
TCTN3-206ENST00000497399 ANKLE2Q86XL3 938 aa14.25□□□□□ -0.13
TCTN3-206ENST00000497399 THEMISQ8N1K5 641 aaPredicted RBP14.25□□□□□ -0.13
TCTN3-206ENST00000497399 LRRC7Q96NW7 1537 aa14.24□□□□□ -0.13
TCTN3-206ENST00000497399 MED1Q15648 1581 aaPredicted RBP14.23□□□□□ -0.13
TCTN3-206ENST00000497399 HSPA1LP34931 641 aa14.23□□□□□ -0.13
TCTN3-206ENST00000497399 TIMELESSQ9UNS1 1208 aa14.23□□□□□ -0.13
TCTN3-206ENST00000497399 ARHGAP23Q9P227 1491 aa14.23□□□□□ -0.13
TCTN3-206ENST00000497399 SLIT1O75093 1534 aa14.22□□□□□ -0.13
TCTN3-206ENST00000497399 SPATA31E1Q6ZUB1 1445 aa14.22□□□□□ -0.13
TCTN3-206ENST00000497399 TONSLQ96HA7 1378 aa14.22□□□□□ -0.13
TCTN3-206ENST00000497399 KDM5AP29375 1690 aaKnown RBP14.2□□□□□ -0.14
TCTN3-206ENST00000497399 MYO5BQ9ULV0 1848 aa14.2□□□□□ -0.14
TCTN3-206ENST00000497399 LTKP29376 864 aa14.2□□□□□ -0.14
TCTN3-206ENST00000497399 L3MBTL2Q969R5 705 aa14.2□□□□□ -0.14
TCTN3-206ENST00000497399 ADGRB3O60242 1522 aa14.2□□□□□ -0.14
TCTN3-206ENST00000497399 PIP4K2BP78356 416 aa14.18□□□□□ -0.14
TCTN3-206ENST00000497399 IDI1Q13907 227 aa14.18□□□□□ -0.14
TCTN3-206ENST00000497399 SLC52A1Q9NWF4 448 aa14.18□□□□□ -0.14
TCTN3-206ENST00000497399 TMEM131LA2VDJ0 1609 aa14.18□□□□□ -0.14
TCTN3-206ENST00000497399 IFT172Q9UG01 1749 aa14.18□□□□□ -0.14
TCTN3-206ENST00000497399 TOM1O60784 492 aa14.17□□□□□ -0.14
TCTN3-206ENST00000497399 PPP1R15AO75807 674 aaPredicted RBP14.17□□□□□ -0.14
TCTN3-206ENST00000497399 SCAF11Q99590 1463 aaKnown RBP14.16□□□□□ -0.14
TCTN3-206ENST00000497399 RGL3Q3MIN7 710 aa14.15□□□□□ -0.14
TCTN3-206ENST00000497399 PPLO60437 1756 aa14.14□□□□□ -0.15
TCTN3-206ENST00000497399 CHGAP10645 457 aaKnown RBP14.11□□□□□ -0.15
TCTN3-206ENST00000497399 DCAF11Q8TEB1 546 aa14.11□□□□□ -0.15
TCTN3-206ENST00000497399 NEXMIFQ5QGS0 1516 aa14.1□□□□□ -0.15
TCTN3-206ENST00000497399 NBPF8Q3BBV2 869 aa14.1□□□□□ -0.15
TCTN3-206ENST00000497399 TXNDC2Q86VQ3 553 aa14.1□□□□□ -0.15
TCTN3-206ENST00000497399 CHD2O14647 1828 aaKnown RBP14.1□□□□□ -0.15
TCTN3-206ENST00000497399 SCAF1Q9H7N4 1312 aaKnown RBP14.1□□□□□ -0.15
TCTN3-206ENST00000497399 TMEM2Q9UHN6 1383 aa14.09□□□□□ -0.15
TCTN3-206ENST00000497399 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
TCTN3-206ENST00000497399 MYOM2P54296 1465 aa14.08□□□□□ -0.16
TCTN3-206ENST00000497399 RPGRIP1LQ68CZ1 1315 aa14.08□□□□□ -0.16
TCTN3-206ENST00000497399 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
TCTN3-206ENST00000497399 ZNF326Q5BKZ1 582 aaKnown RBP14.07□□□□□ -0.16
TCTN3-206ENST00000497399 RGS17Q9UGC6 210 aaPredicted RBP14.07□□□□□ -0.16
TCTN3-206ENST00000497399 NWD1Q149M9 1564 aa14.07□□□□□ -0.16
TCTN3-206ENST00000497399 NRXN1Q9ULB1 1477 aa14.06□□□□□ -0.16
TCTN3-206ENST00000497399 TRPM1Q7Z4N2 1603 aa14.06□□□□□ -0.16
TCTN3-206ENST00000497399 ROBO1Q9Y6N7 1651 aa14.05□□□□□ -0.16
TCTN3-206ENST00000497399 STAC3Q96MF2 364 aa14.05□□□□□ -0.16
TCTN3-206ENST00000497399 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
TCTN3-206ENST00000497399 ADGRF5Q8IZF2 1346 aa14.04□□□□□ -0.16
TCTN3-206ENST00000497399 ZFYVE9O95405 1425 aa14.04□□□□□ -0.16
TCTN3-206ENST00000497399 RIMS2Q9UQ26 1411 aa14.04□□□□□ -0.16
TCTN3-206ENST00000497399 RALGAPBQ86X10 1494 aa14.03□□□□□ -0.16
TCTN3-206ENST00000497399 KIAA1210Q9ULL0 1709 aa14.03□□□□□ -0.16
TCTN3-206ENST00000497399 FAM135BQ49AJ0 1406 aa14.02□□□□□ -0.16
TCTN3-206ENST00000497399 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
TCTN3-206ENST00000497399 PIK3C2GO75747 1445 aa14□□□□□ -0.17
TCTN3-206ENST00000497399 TMEM94Q12767 1356 aa14□□□□□ -0.17
TCTN3-206ENST00000497399 KCNA6P17658 529 aa14□□□□□ -0.17
TCTN3-206ENST00000497399 RBM33Q96EV2 1170 aaKnown RBP14□□□□□ -0.17
TCTN3-206ENST00000497399 SLC26A8Q96RN1 970 aa14□□□□□ -0.17
TCTN3-206ENST00000497399 SENP3Q9H4L4 574 aaPredicted RBP14□□□□□ -0.17
TCTN3-206ENST00000497399 EID1Q9Y6B2 187 aa14□□□□□ -0.17
TCTN3-206ENST00000497399 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
TCTN3-206ENST00000497399 LAMC1P11047 1609 aa13.98□□□□□ -0.17
TCTN3-206ENST00000497399 NRXN3Q9Y4C0 1643 aa13.98□□□□□ -0.17
TCTN3-206ENST00000497399 GPRASP1Q5JY77 1395 aa13.97□□□□□ -0.17
TCTN3-206ENST00000497399 NBPF1Q3BBV0 1214 aa13.97□□□□□ -0.17
TCTN3-206ENST00000497399 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.97□□□□□ -0.17
TCTN3-206ENST00000497399 SETD1AO15047 1707 aaKnown RBP13.97□□□□□ -0.17
TCTN3-206ENST00000497399 NKTRP30414 1462 aaKnown RBP13.97□□□□□ -0.17
TCTN3-206ENST00000497399 PHLPP1O60346 1717 aa13.96□□□□□ -0.17
TCTN3-206ENST00000497399 CFAP70Q5T0N1 1121 aa13.96□□□□□ -0.17
TCTN3-206ENST00000497399 C14orf93Q9H972 538 aaKnown RBP13.95□□□□□ -0.18
TCTN3-206ENST00000497399 ADGRB1O14514 1584 aa13.95□□□□□ -0.18
TCTN3-206ENST00000497399 SETBP1Q9Y6X0 1596 aa13.95□□□□□ -0.18
TCTN3-206ENST00000497399 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.95□□□□□ -0.18
TCTN3-206ENST00000497399 ASXL1Q8IXJ9 1541 aa13.95□□□□□ -0.18
TCTN3-206ENST00000497399 HDGFP51858 240 aaKnown RBP13.94□□□□□ -0.18
TCTN3-206ENST00000497399 ADAMTS13Q76LX8 1427 aa13.94□□□□□ -0.18
TCTN3-206ENST00000497399 ROCK2O75116 1388 aaKnown RBP13.94□□□□□ -0.18
TCTN3-206ENST00000497399 PLEKHG1Q9ULL1 1385 aa13.94□□□□□ -0.18
TCTN3-206ENST00000497399 COL16A1Q07092 1604 aaPredicted RBP13.93□□□□□ -0.18
TCTN3-206ENST00000497399 POTEAQ6S8J7 498 aa13.92□□□□□ -0.18
TCTN3-206ENST00000497399 PROSER2Q86WR7 435 aaPredicted RBP13.92□□□□□ -0.18
TCTN3-206ENST00000497399 CARD11Q9BXL7 1154 aa13.92□□□□□ -0.18
TCTN3-206ENST00000497399 PHF23Q9BUL5 403 aaPredicted RBP13.91□□□□□ -0.18
TCTN3-206ENST00000497399 USP47Q96K76 1375 aa13.89□□□□□ -0.19
TCTN3-206ENST00000497399 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
TCTN3-206ENST00000497399 TBX22Q9Y458 520 aa13.89□□□□□ -0.19
TCTN3-206ENST00000497399 PTPRUQ92729 1446 aa13.89□□□□□ -0.19
TCTN3-206ENST00000497399 XRN1Q8IZH2 1706 aaKnown RBP13.88□□□□□ -0.19
TCTN3-206ENST00000497399 EIF4G2P78344 907 aaKnown RBP eCLIP13.88□□□□□ -0.19
TCTN3-206ENST00000497399 TMEM132EQ6IEE7 984 aa13.88□□□□□ -0.19
TCTN3-206ENST00000497399 HIRIP3Q9BW71 556 aaPredicted RBP13.88□□□□□ -0.19
TCTN3-206ENST00000497399 ARHGEF28Q8N1W1 1705 aaKnown RBP13.87□□□□□ -0.19
TCTN3-206ENST00000497399 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
TCTN3-206ENST00000497399 DIP2AQ14689 1571 aa13.87□□□□□ -0.19
TCTN3-206ENST00000497399 SHPRHQ149N8 1683 aa13.86□□□□□ -0.19
TCTN3-206ENST00000497399 ZNF316A6NFI3 1004 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms