RNA–Protein interactions for RNA: ENST00000497267.5

ARHGEF3-214, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene ARHGEF3, Length 2,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-214ENST00000497267 ROBO1Q9Y6N7 1651 aa11.17□□□□□ -0.62
ARHGEF3-214ENST00000497267 RPRD2Q5VT52 1461 aaKnown RBP11.17□□□□□ -0.62
ARHGEF3-214ENST00000497267 FAM50AQ14320 339 aaKnown RBP11.17□□□□□ -0.62
ARHGEF3-214ENST00000497267 STAG3Q9UJ98 1225 aa11.17□□□□□ -0.62
ARHGEF3-214ENST00000497267 E9PCH4 1651 aa11.16□□□□□ -0.62
ARHGEF3-214ENST00000497267 NKTRP30414 1462 aaKnown RBP11.15□□□□□ -0.62
ARHGEF3-214ENST00000497267 PHF23Q9BUL5 403 aaPredicted RBP11.14□□□□□ -0.63
ARHGEF3-214ENST00000497267 SLC52A1Q9NWF4 448 aa11.14□□□□□ -0.63
ARHGEF3-214ENST00000497267 RIMS2Q9UQ26 1411 aa11.14□□□□□ -0.63
ARHGEF3-214ENST00000497267 CHD2O14647 1828 aaKnown RBP11.14□□□□□ -0.63
ARHGEF3-214ENST00000497267 PLEKHG1Q9ULL1 1385 aa11.14□□□□□ -0.63
ARHGEF3-214ENST00000497267 PROSER2Q86WR7 435 aaPredicted RBP11.13□□□□□ -0.63
ARHGEF3-214ENST00000497267 ADAMTS13Q76LX8 1427 aa11.13□□□□□ -0.63
ARHGEF3-214ENST00000497267 IQGAP3Q86VI3 1631 aa11.12□□□□□ -0.63
ARHGEF3-214ENST00000497267 POTEAQ6S8J7 498 aa11.11□□□□□ -0.63
ARHGEF3-214ENST00000497267 NUTM2DQ5VT03 806 aaPredicted RBP11.1□□□□□ -0.63
ARHGEF3-214ENST00000497267 ROCK1Q13464 1354 aa11.1□□□□□ -0.63
ARHGEF3-214ENST00000497267 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
ARHGEF3-214ENST00000497267 PTPRUQ92729 1446 aa11.09□□□□□ -0.63
ARHGEF3-214ENST00000497267 PHLPP1O60346 1717 aa11.08□□□□□ -0.64
ARHGEF3-214ENST00000497267 NRXN3Q9Y4C0 1643 aa11.08□□□□□ -0.64
ARHGEF3-214ENST00000497267 MSH6P52701 1360 aa11.08□□□□□ -0.64
ARHGEF3-214ENST00000497267 SLAIN2Q9P270 581 aa11.07□□□□□ -0.64
ARHGEF3-214ENST00000497267 TBX22Q9Y458 520 aa11.07□□□□□ -0.64
ARHGEF3-214ENST00000497267 BCANQ96GW7 911 aa11.07□□□□□ -0.64
ARHGEF3-214ENST00000497267 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.07□□□□□ -0.64
ARHGEF3-214ENST00000497267 LRP6O75581 1613 aa11.06□□□□□ -0.64
ARHGEF3-214ENST00000497267 DIP2AQ14689 1571 aa11.06□□□□□ -0.64
ARHGEF3-214ENST00000497267 PPARGC1BQ86YN6 1023 aaKnown RBP11.06□□□□□ -0.64
ARHGEF3-214ENST00000497267 PPP1R15AO75807 674 aaPredicted RBP11.06□□□□□ -0.64
ARHGEF3-214ENST00000497267 CHGAP10645 457 aaKnown RBP11.06□□□□□ -0.64
ARHGEF3-214ENST00000497267 NUP155O75694 1391 aa11.05□□□□□ -0.64
ARHGEF3-214ENST00000497267 SETD1AO15047 1707 aaKnown RBP11.05□□□□□ -0.64
ARHGEF3-214ENST00000497267 XRN1Q8IZH2 1706 aaKnown RBP11.04□□□□□ -0.64
ARHGEF3-214ENST00000497267 NCOA3Q9Y6Q9 1424 aa11.04□□□□□ -0.64
ARHGEF3-214ENST00000497267 ITGAEP38570 1179 aa11.04□□□□□ -0.64
ARHGEF3-214ENST00000497267 SPHKAPQ2M3C7 1700 aa11.03□□□□□ -0.64
ARHGEF3-214ENST00000497267 AHDC1Q5TGY3 1603 aaPredicted RBP11.03□□□□□ -0.64
ARHGEF3-214ENST00000497267 JCADQ9P266 1359 aa11.03□□□□□ -0.64
ARHGEF3-214ENST00000497267 SETBP1Q9Y6X0 1596 aa11.03□□□□□ -0.64
ARHGEF3-214ENST00000497267 TRPM2O94759 1503 aa11.03□□□□□ -0.64
ARHGEF3-214ENST00000497267 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.03□□□□□ -0.64
ARHGEF3-214ENST00000497267 PIK3R4Q99570 1358 aa11.02□□□□□ -0.64
ARHGEF3-214ENST00000497267 CLTCL1P53675 1640 aa11.02□□□□□ -0.65
ARHGEF3-214ENST00000497267 AMOTL2Q9Y2J4 779 aa11.01□□□□□ -0.65
ARHGEF3-214ENST00000497267 METP08581 1390 aa11.01□□□□□ -0.65
ARHGEF3-214ENST00000497267 HDGFP51858 240 aaKnown RBP11□□□□□ -0.65
ARHGEF3-214ENST00000497267 SHPRHQ149N8 1683 aa11□□□□□ -0.65
ARHGEF3-214ENST00000497267 NEXMIFQ5QGS0 1516 aa11□□□□□ -0.65
ARHGEF3-214ENST00000497267 BRINP3Q76B58 766 aa10.99□□□□□ -0.65
ARHGEF3-214ENST00000497267 C19orf44Q9H6X5 657 aa10.99□□□□□ -0.65
ARHGEF3-214ENST00000497267 MST1RQ04912 1400 aa10.98□□□□□ -0.65
ARHGEF3-214ENST00000497267 ASXL1Q8IXJ9 1541 aa10.98□□□□□ -0.65
ARHGEF3-214ENST00000497267 NAIPQ13075 1403 aa10.98□□□□□ -0.65
ARHGEF3-214ENST00000497267 RRBP1Q9P2E9 1410 aaKnown RBP10.98□□□□□ -0.65
ARHGEF3-214ENST00000497267 C14orf37Q86TY3 774 aa10.97□□□□□ -0.65
ARHGEF3-214ENST00000497267 CADPS2Q86UW7 1296 aa10.97□□□□□ -0.65
ARHGEF3-214ENST00000497267 NALCNQ8IZF0 1738 aa10.97□□□□□ -0.65
ARHGEF3-214ENST00000497267 NHSL1Q5SYE7 1610 aa10.97□□□□□ -0.65
ARHGEF3-214ENST00000497267 DCCP43146 1447 aa10.97□□□□□ -0.65
ARHGEF3-214ENST00000497267 ATF3P18847 181 aa10.96□□□□□ -0.66
ARHGEF3-214ENST00000497267 SPATA31A6Q5VVP1 1343 aa10.95□□□□□ -0.66
ARHGEF3-214ENST00000497267 DDX17Q92841 729 aaKnown RBP10.95□□□□□ -0.66
ARHGEF3-214ENST00000497267 ADGRL3Q9HAR2 1447 aa10.94□□□□□ -0.66
ARHGEF3-214ENST00000497267 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
ARHGEF3-214ENST00000497267 ZNF326Q5BKZ1 582 aaKnown RBP10.93□□□□□ -0.66
ARHGEF3-214ENST00000497267 ROBO2Q9HCK4 1378 aa10.92□□□□□ -0.66
ARHGEF3-214ENST00000497267 KIF1BO60333 1816 aa10.91□□□□□ -0.66
ARHGEF3-214ENST00000497267 PNPLA6Q8IY17 1366 aa10.9□□□□□ -0.66
ARHGEF3-214ENST00000497267 NUTM2BA6NNL0 878 aaPredicted RBP10.9□□□□□ -0.66
ARHGEF3-214ENST00000497267 NUTM2EB1AL46 878 aaPredicted RBP10.9□□□□□ -0.66
ARHGEF3-214ENST00000497267 NUTM2AQ8IVF1 878 aaPredicted RBP10.9□□□□□ -0.66
ARHGEF3-214ENST00000497267 LAMC1P11047 1609 aa10.9□□□□□ -0.66
ARHGEF3-214ENST00000497267 C1orf167Q5SNV9 1468 aa10.9□□□□□ -0.66
ARHGEF3-214ENST00000497267 HFM1A2PYH4 1435 aa10.9□□□□□ -0.66
ARHGEF3-214ENST00000497267 TRIM52Q96A61 297 aa10.9□□□□□ -0.66
ARHGEF3-214ENST00000497267 PTCH1Q13635 1447 aa10.89□□□□□ -0.67
ARHGEF3-214ENST00000497267 PRAG1Q86YV5 1406 aa10.89□□□□□ -0.67
ARHGEF3-214ENST00000497267 MEX3CQ5U5Q3 659 aaKnown RBP10.89□□□□□ -0.67
ARHGEF3-214ENST00000497267 UPF1Q92900 1129 aaKnown RBP eCLIP10.89□□□□□ -0.67
ARHGEF3-214ENST00000497267 PPLO60437 1756 aa10.89□□□□□ -0.67
ARHGEF3-214ENST00000497267 AFF2P51816 1311 aa10.88□□□□□ -0.67
ARHGEF3-214ENST00000497267 ZNF772Q68DY9 489 aaPredicted RBP10.88□□□□□ -0.67
ARHGEF3-214ENST00000497267 FOXD1Q16676 465 aa10.87□□□□□ -0.67
ARHGEF3-214ENST00000497267 ORAI2Q96SN7 254 aa10.87□□□□□ -0.67
ARHGEF3-214ENST00000497267 CDK12Q9NYV4 1490 aaPredicted RBP10.86□□□□□ -0.67
ARHGEF3-214ENST00000497267 RGS12O14924 1447 aa10.86□□□□□ -0.67
ARHGEF3-214ENST00000497267 LRRC59Q96AG4 307 aaKnown RBP10.85□□□□□ -0.67
ARHGEF3-214ENST00000497267 RXRBP28702 533 aa10.84□□□□□ -0.67
ARHGEF3-214ENST00000497267 SOS2Q07890 1332 aaPredicted RBP10.84□□□□□ -0.67
ARHGEF3-214ENST00000497267 C8orf37Q96NL8 207 aa10.84□□□□□ -0.67
ARHGEF3-214ENST00000497267 SPATA31E1Q6ZUB1 1445 aa10.84□□□□□ -0.67
ARHGEF3-214ENST00000497267 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
ARHGEF3-214ENST00000497267 VGFO15240 615 aaPredicted RBP10.83□□□□□ -0.68
ARHGEF3-214ENST00000497267 SLC4A1APQ9BWU0 796 aaKnown RBP10.83□□□□□ -0.68
ARHGEF3-214ENST00000497267 IFT172Q9UG01 1749 aa10.83□□□□□ -0.68
ARHGEF3-214ENST00000497267 CDC42BPGQ6DT37 1551 aa10.82□□□□□ -0.68
ARHGEF3-214ENST00000497267 COL22A1Q8NFW1 1626 aaPredicted RBP10.82□□□□□ -0.68
ARHGEF3-214ENST00000497267 RPGRIP1LQ68CZ1 1315 aa10.82□□□□□ -0.68
ARHGEF3-214ENST00000497267 PXDNQ92626 1479 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms