RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 TRIM52Q96A61 297 aa16.42■□□□□ 0.22
ECM1-206ENST00000496744 NUTM2DQ5VT03 806 aaPredicted RBP16.41■□□□□ 0.22
ECM1-206ENST00000496744 ALKQ9UM73 1620 aa16.41■□□□□ 0.22
ECM1-206ENST00000496744 SPHKAPQ2M3C7 1700 aa16.4■□□□□ 0.22
ECM1-206ENST00000496744 KCNA6P17658 529 aa16.4■□□□□ 0.22
ECM1-206ENST00000496744 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.4■□□□□ 0.22
ECM1-206ENST00000496744 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
ECM1-206ENST00000496744 TOM1O60784 492 aa16.39■□□□□ 0.21
ECM1-206ENST00000496744 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
ECM1-206ENST00000496744 PPP1R15AO75807 674 aaPredicted RBP16.38■□□□□ 0.21
ECM1-206ENST00000496744 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
ECM1-206ENST00000496744 TRPM2O94759 1503 aa16.37■□□□□ 0.21
ECM1-206ENST00000496744 BCANQ96GW7 911 aa16.37■□□□□ 0.21
ECM1-206ENST00000496744 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
ECM1-206ENST00000496744 PIP4K2BP78356 416 aa16.36■□□□□ 0.21
ECM1-206ENST00000496744 CLTCL1P53675 1640 aa16.35■□□□□ 0.21
ECM1-206ENST00000496744 XIRP1Q702N8 1843 aaKnown RBP16.35■□□□□ 0.21
ECM1-206ENST00000496744 FOXD1Q16676 465 aa16.34■□□□□ 0.21
ECM1-206ENST00000496744 TMEM94Q12767 1356 aa16.34■□□□□ 0.21
ECM1-206ENST00000496744 RBM33Q96EV2 1170 aaKnown RBP16.33■□□□□ 0.2
ECM1-206ENST00000496744 MPHOSPH9Q99550 1183 aa16.33■□□□□ 0.2
ECM1-206ENST00000496744 NWD1Q149M9 1564 aa16.33■□□□□ 0.2
ECM1-206ENST00000496744 ZNF326Q5BKZ1 582 aaKnown RBP16.32■□□□□ 0.2
ECM1-206ENST00000496744 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
ECM1-206ENST00000496744 SETD5Q9C0A6 1442 aa16.32■□□□□ 0.2
ECM1-206ENST00000496744 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
ECM1-206ENST00000496744 HSPA1LP34931 641 aa16.31■□□□□ 0.2
ECM1-206ENST00000496744 CHD2O14647 1828 aaKnown RBP16.31■□□□□ 0.2
ECM1-206ENST00000496744 NKTRP30414 1462 aaKnown RBP16.3■□□□□ 0.2
ECM1-206ENST00000496744 NEXMIFQ5QGS0 1516 aa16.29■□□□□ 0.2
ECM1-206ENST00000496744 PIK3R4Q99570 1358 aa16.28■□□□□ 0.2
ECM1-206ENST00000496744 NRXN3Q9Y4C0 1643 aa16.28■□□□□ 0.2
ECM1-206ENST00000496744 PTPRUQ92729 1446 aa16.28■□□□□ 0.2
ECM1-206ENST00000496744 DIP2AQ14689 1571 aa16.27■□□□□ 0.2
ECM1-206ENST00000496744 SETBP1Q9Y6X0 1596 aa16.27■□□□□ 0.2
ECM1-206ENST00000496744 RAB3GAP2Q9H2M9 1393 aa16.26■□□□□ 0.19
ECM1-206ENST00000496744 KIF1BO60333 1816 aa16.26■□□□□ 0.19
ECM1-206ENST00000496744 ACIN1Q9UKV3 1341 aaKnown RBP16.25■□□□□ 0.19
ECM1-206ENST00000496744 AMOTL2Q9Y2J4 779 aa16.25■□□□□ 0.19
ECM1-206ENST00000496744 METP08581 1390 aa16.25■□□□□ 0.19
ECM1-206ENST00000496744 RPGRIP1LQ68CZ1 1315 aa16.24■□□□□ 0.19
ECM1-206ENST00000496744 VGFO15240 615 aaPredicted RBP16.23■□□□□ 0.19
ECM1-206ENST00000496744 FAM135BQ49AJ0 1406 aa16.22■□□□□ 0.19
ECM1-206ENST00000496744 SPATA31E1Q6ZUB1 1445 aa16.22■□□□□ 0.19
ECM1-206ENST00000496744 NCOA3Q9Y6Q9 1424 aa16.22■□□□□ 0.19
ECM1-206ENST00000496744 CCDC144AA2RUR9 1427 aa16.21■□□□□ 0.19
ECM1-206ENST00000496744 MSH6P52701 1360 aa16.21■□□□□ 0.19
ECM1-206ENST00000496744 HRCP23327 699 aa16.2■□□□□ 0.18
ECM1-206ENST00000496744 DISP3Q9P2K9 1392 aa16.19■□□□□ 0.18
ECM1-206ENST00000496744 SLAIN2Q9P270 581 aa16.19■□□□□ 0.18
ECM1-206ENST00000496744 RGL3Q3MIN7 710 aa16.18■□□□□ 0.18
ECM1-206ENST00000496744 C19orf44Q9H6X5 657 aa16.18■□□□□ 0.18
ECM1-206ENST00000496744 XRN1Q8IZH2 1706 aaKnown RBP16.18■□□□□ 0.18
ECM1-206ENST00000496744 PPLO60437 1756 aa16.17■□□□□ 0.18
ECM1-206ENST00000496744 ADGRF5Q8IZF2 1346 aa16.17■□□□□ 0.18
ECM1-206ENST00000496744 SETD1AO15047 1707 aaKnown RBP16.15■□□□□ 0.18
ECM1-206ENST00000496744 ANKRD30BQ9BXX2 1392 aa16.14■□□□□ 0.17
ECM1-206ENST00000496744 C14orf37Q86TY3 774 aa16.14■□□□□ 0.17
ECM1-206ENST00000496744 ROBO1Q9Y6N7 1651 aa16.14■□□□□ 0.17
ECM1-206ENST00000496744 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.14■□□□□ 0.17
ECM1-206ENST00000496744 ILDR2Q71H61 639 aa16.13■□□□□ 0.17
ECM1-206ENST00000496744 CADPS2Q86UW7 1296 aa16.13■□□□□ 0.17
ECM1-206ENST00000496744 ROBO2Q9HCK4 1378 aa16.12■□□□□ 0.17
ECM1-206ENST00000496744 ATF3P18847 181 aa16.11■□□□□ 0.17
ECM1-206ENST00000496744 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
ECM1-206ENST00000496744 PRAG1Q86YV5 1406 aa16.11■□□□□ 0.17
ECM1-206ENST00000496744 DCCP43146 1447 aa16.1■□□□□ 0.17
ECM1-206ENST00000496744 MED1Q15648 1581 aaPredicted RBP16.09■□□□□ 0.17
ECM1-206ENST00000496744 PIK3C2GO75747 1445 aa16.09■□□□□ 0.17
ECM1-206ENST00000496744 PTCH1Q13635 1447 aa16.09■□□□□ 0.17
ECM1-206ENST00000496744 ADGRL3Q9HAR2 1447 aa16.08■□□□□ 0.16
ECM1-206ENST00000496744 NRXN1Q9ULB1 1477 aa16.06■□□□□ 0.16
ECM1-206ENST00000496744 MST1RQ04912 1400 aa16.06■□□□□ 0.16
ECM1-206ENST00000496744 TMEM132EQ6IEE7 984 aa16.06■□□□□ 0.16
ECM1-206ENST00000496744 BRINP3Q76B58 766 aa16.06■□□□□ 0.16
ECM1-206ENST00000496744 C14orf93Q9H972 538 aaKnown RBP16.06■□□□□ 0.16
ECM1-206ENST00000496744 ASXL1Q8IXJ9 1541 aa16.05■□□□□ 0.16
ECM1-206ENST00000496744 NALCNQ8IZF0 1738 aa16.04■□□□□ 0.16
ECM1-206ENST00000496744 MYOM2P54296 1465 aa16.03■□□□□ 0.16
ECM1-206ENST00000496744 TECPR2O15040 1411 aa16.03■□□□□ 0.16
ECM1-206ENST00000496744 LRPPRCP42704 1394 aaKnown RBP16.03■□□□□ 0.16
ECM1-206ENST00000496744 ABCC11Q96J66 1382 aa16.03■□□□□ 0.16
ECM1-206ENST00000496744 STK26Q9P289 416 aa16.03■□□□□ 0.16
ECM1-206ENST00000496744 CFAP70Q5T0N1 1121 aa16.02■□□□□ 0.16
ECM1-206ENST00000496744 PHLPP1O60346 1717 aa16.02■□□□□ 0.15
ECM1-206ENST00000496744 COL16A1Q07092 1604 aaPredicted RBP16.01■□□□□ 0.15
ECM1-206ENST00000496744 WAPLQ7Z5K2 1190 aa16.01■□□□□ 0.15
ECM1-206ENST00000496744 AHDC1Q5TGY3 1603 aaPredicted RBP16.01■□□□□ 0.15
ECM1-206ENST00000496744 RGS17Q9UGC6 210 aaPredicted RBP16■□□□□ 0.15
ECM1-206ENST00000496744 YTHDC2Q9H6S0 1430 aaKnown RBP16■□□□□ 0.15
ECM1-206ENST00000496744 DHX57Q6P158 1386 aaKnown RBP16■□□□□ 0.15
ECM1-206ENST00000496744 JCADQ9P266 1359 aa16■□□□□ 0.15
ECM1-206ENST00000496744 C1orf167Q5SNV9 1468 aa15.99■□□□□ 0.15
ECM1-206ENST00000496744 PLEKHH1Q9ULM0 1364 aa15.99■□□□□ 0.15
ECM1-206ENST00000496744 DCAF11Q8TEB1 546 aa15.98■□□□□ 0.15
ECM1-206ENST00000496744 SIRT1Q96EB6 747 aa15.98■□□□□ 0.15
ECM1-206ENST00000496744 DDX17Q92841 729 aaKnown RBP15.97■□□□□ 0.15
ECM1-206ENST00000496744 ORAI2Q96SN7 254 aa15.97■□□□□ 0.15
ECM1-206ENST00000496744 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
ECM1-206ENST00000496744 STAC3Q96MF2 364 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms