RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 MYO5BQ9ULV0 1848 aa18.79■□□□□ 0.6
CLDN12-213ENST00000496677 RIMS2Q9UQ26 1411 aa18.78■□□□□ 0.6
CLDN12-213ENST00000496677 SLC26A8Q96RN1 970 aa18.78■□□□□ 0.6
CLDN12-213ENST00000496677 KCNA6P17658 529 aa18.77■□□□□ 0.6
CLDN12-213ENST00000496677 PLEKHG1Q9ULL1 1385 aa18.76■□□□□ 0.59
CLDN12-213ENST00000496677 HFM1A2PYH4 1435 aa18.75■□□□□ 0.59
CLDN12-213ENST00000496677 HDGFP51858 240 aaKnown RBP18.75■□□□□ 0.59
CLDN12-213ENST00000496677 PIP4K2BP78356 416 aa18.74■□□□□ 0.59
CLDN12-213ENST00000496677 XIRP1Q702N8 1843 aaKnown RBP18.74■□□□□ 0.59
CLDN12-213ENST00000496677 CHGAP10645 457 aaKnown RBP18.73■□□□□ 0.59
CLDN12-213ENST00000496677 HSPA1LP34931 641 aa18.73■□□□□ 0.59
CLDN12-213ENST00000496677 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.73■□□□□ 0.59
CLDN12-213ENST00000496677 ADRA2BP18089 450 aa18.71■□□□□ 0.59
CLDN12-213ENST00000496677 TBX22Q9Y458 520 aa18.71■□□□□ 0.59
CLDN12-213ENST00000496677 NWD1Q149M9 1564 aa18.7■□□□□ 0.58
CLDN12-213ENST00000496677 SPHKAPQ2M3C7 1700 aa18.7■□□□□ 0.58
CLDN12-213ENST00000496677 TMEM94Q12767 1356 aa18.69■□□□□ 0.58
CLDN12-213ENST00000496677 ADAMTS13Q76LX8 1427 aa18.69■□□□□ 0.58
CLDN12-213ENST00000496677 SCAF1Q9H7N4 1312 aaKnown RBP18.69■□□□□ 0.58
CLDN12-213ENST00000496677 PPP1R15AO75807 674 aaPredicted RBP18.68■□□□□ 0.58
CLDN12-213ENST00000496677 NUTM2DQ5VT03 806 aaPredicted RBP18.68■□□□□ 0.58
CLDN12-213ENST00000496677 BCANQ96GW7 911 aa18.68■□□□□ 0.58
CLDN12-213ENST00000496677 PROSER2Q86WR7 435 aaPredicted RBP18.67■□□□□ 0.58
CLDN12-213ENST00000496677 DISP3Q9P2K9 1392 aa18.67■□□□□ 0.58
CLDN12-213ENST00000496677 NKTRP30414 1462 aaKnown RBP18.66■□□□□ 0.58
CLDN12-213ENST00000496677 CHD2O14647 1828 aaKnown RBP18.66■□□□□ 0.58
CLDN12-213ENST00000496677 TRPM2O94759 1503 aa18.65■□□□□ 0.58
CLDN12-213ENST00000496677 RBM33Q96EV2 1170 aaKnown RBP18.65■□□□□ 0.58
CLDN12-213ENST00000496677 CLTCL1P53675 1640 aa18.64■□□□□ 0.57
CLDN12-213ENST00000496677 TRIM52Q96A61 297 aa18.64■□□□□ 0.57
CLDN12-213ENST00000496677 PIK3R4Q99570 1358 aa18.62■□□□□ 0.57
CLDN12-213ENST00000496677 DIP2AQ14689 1571 aa18.61■□□□□ 0.57
CLDN12-213ENST00000496677 ILDR2Q71H61 639 aa18.61■□□□□ 0.57
CLDN12-213ENST00000496677 SLC4A1APQ9BWU0 796 aaKnown RBP18.61■□□□□ 0.57
CLDN12-213ENST00000496677 FAM135BQ49AJ0 1406 aa18.6■□□□□ 0.57
CLDN12-213ENST00000496677 NRXN3Q9Y4C0 1643 aa18.59■□□□□ 0.57
CLDN12-213ENST00000496677 PTPRUQ92729 1446 aa18.58■□□□□ 0.57
CLDN12-213ENST00000496677 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.57
CLDN12-213ENST00000496677 SETBP1Q9Y6X0 1596 aa18.58■□□□□ 0.56
CLDN12-213ENST00000496677 ZNF326Q5BKZ1 582 aaKnown RBP18.57■□□□□ 0.56
CLDN12-213ENST00000496677 NEXMIFQ5QGS0 1516 aa18.57■□□□□ 0.56
CLDN12-213ENST00000496677 AMOTL2Q9Y2J4 779 aa18.56■□□□□ 0.56
CLDN12-213ENST00000496677 MSH6P52701 1360 aa18.55■□□□□ 0.56
CLDN12-213ENST00000496677 KIF1BO60333 1816 aa18.54■□□□□ 0.56
CLDN12-213ENST00000496677 MPHOSPH9Q99550 1183 aa18.54■□□□□ 0.56
CLDN12-213ENST00000496677 SLAIN2Q9P270 581 aa18.54■□□□□ 0.56
CLDN12-213ENST00000496677 METP08581 1390 aa18.54■□□□□ 0.56
CLDN12-213ENST00000496677 RPGRIP1LQ68CZ1 1315 aa18.51■□□□□ 0.55
CLDN12-213ENST00000496677 MED1Q15648 1581 aaPredicted RBP18.51■□□□□ 0.55
CLDN12-213ENST00000496677 SETD5Q9C0A6 1442 aa18.51■□□□□ 0.55
CLDN12-213ENST00000496677 XRN1Q8IZH2 1706 aaKnown RBP18.5■□□□□ 0.55
CLDN12-213ENST00000496677 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
CLDN12-213ENST00000496677 VGFO15240 615 aaPredicted RBP18.49■□□□□ 0.55
CLDN12-213ENST00000496677 ROBO1Q9Y6N7 1651 aa18.49■□□□□ 0.55
CLDN12-213ENST00000496677 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
CLDN12-213ENST00000496677 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.46■□□□□ 0.55
CLDN12-213ENST00000496677 SPATA31E1Q6ZUB1 1445 aa18.46■□□□□ 0.55
CLDN12-213ENST00000496677 CADPS2Q86UW7 1296 aa18.45■□□□□ 0.54
CLDN12-213ENST00000496677 SETD1AO15047 1707 aaKnown RBP18.44■□□□□ 0.54
CLDN12-213ENST00000496677 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
CLDN12-213ENST00000496677 PPLO60437 1756 aa18.44■□□□□ 0.54
CLDN12-213ENST00000496677 CCDC144AA2RUR9 1427 aa18.43■□□□□ 0.54
CLDN12-213ENST00000496677 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
CLDN12-213ENST00000496677 SOCS7O14512 581 aa18.42■□□□□ 0.54
CLDN12-213ENST00000496677 ATF3P18847 181 aa18.42■□□□□ 0.54
CLDN12-213ENST00000496677 DCCP43146 1447 aa18.41■□□□□ 0.54
CLDN12-213ENST00000496677 ADGRF5Q8IZF2 1346 aa18.41■□□□□ 0.54
CLDN12-213ENST00000496677 PRAG1Q86YV5 1406 aa18.4■□□□□ 0.54
CLDN12-213ENST00000496677 RGL3Q3MIN7 710 aa18.4■□□□□ 0.54
CLDN12-213ENST00000496677 HRCP23327 699 aa18.38■□□□□ 0.53
CLDN12-213ENST00000496677 ANKRD30BQ9BXX2 1392 aa18.38■□□□□ 0.53
CLDN12-213ENST00000496677 ROBO2Q9HCK4 1378 aa18.38■□□□□ 0.53
CLDN12-213ENST00000496677 PTCH1Q13635 1447 aa18.38■□□□□ 0.53
CLDN12-213ENST00000496677 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
CLDN12-213ENST00000496677 RGS17Q9UGC6 210 aaPredicted RBP18.37■□□□□ 0.53
CLDN12-213ENST00000496677 MST1RQ04912 1400 aa18.37■□□□□ 0.53
CLDN12-213ENST00000496677 ADGRL3Q9HAR2 1447 aa18.37■□□□□ 0.53
CLDN12-213ENST00000496677 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
CLDN12-213ENST00000496677 COL16A1Q07092 1604 aaPredicted RBP18.36■□□□□ 0.53
CLDN12-213ENST00000496677 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
CLDN12-213ENST00000496677 AHDC1Q5TGY3 1603 aaPredicted RBP18.35■□□□□ 0.53
CLDN12-213ENST00000496677 JCADQ9P266 1359 aa18.33■□□□□ 0.53
CLDN12-213ENST00000496677 NALCNQ8IZF0 1738 aa18.33■□□□□ 0.52
CLDN12-213ENST00000496677 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
CLDN12-213ENST00000496677 ASXL1Q8IXJ9 1541 aa18.3■□□□□ 0.52
CLDN12-213ENST00000496677 NRXN1Q9ULB1 1477 aa18.3■□□□□ 0.52
CLDN12-213ENST00000496677 LRPPRCP42704 1394 aaKnown RBP18.3■□□□□ 0.52
CLDN12-213ENST00000496677 TECPR2O15040 1411 aa18.29■□□□□ 0.52
CLDN12-213ENST00000496677 ABCC11Q96J66 1382 aa18.29■□□□□ 0.52
CLDN12-213ENST00000496677 C1orf167Q5SNV9 1468 aa18.28■□□□□ 0.52
CLDN12-213ENST00000496677 TMEM132EQ6IEE7 984 aa18.28■□□□□ 0.52
CLDN12-213ENST00000496677 C14orf93Q9H972 538 aaKnown RBP18.28■□□□□ 0.52
CLDN12-213ENST00000496677 MYOM2P54296 1465 aa18.26■□□□□ 0.51
CLDN12-213ENST00000496677 SPATA31A6Q5VVP1 1343 aa18.25■□□□□ 0.51
CLDN12-213ENST00000496677 NHSL1Q5SYE7 1610 aa18.25■□□□□ 0.51
CLDN12-213ENST00000496677 STK26Q9P289 416 aa18.25■□□□□ 0.51
CLDN12-213ENST00000496677 CFAP70Q5T0N1 1121 aa18.24■□□□□ 0.51
CLDN12-213ENST00000496677 POTEAQ6S8J7 498 aa18.24■□□□□ 0.51
CLDN12-213ENST00000496677 WAPLQ7Z5K2 1190 aa18.24■□□□□ 0.51
CLDN12-213ENST00000496677 DDX17Q92841 729 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms