RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 CHGAP10645 457 aaKnown RBP24.12■■□□□ 1.45
DNMT3A-215ENST00000496570 CPS1P31327 1500 aa24.11■■□□□ 1.45
DNMT3A-215ENST00000496570 FOXD1Q16676 465 aa24.1■■□□□ 1.45
DNMT3A-215ENST00000496570 MPHOSPH9Q99550 1183 aa24.1■■□□□ 1.45
DNMT3A-215ENST00000496570 PLEKHG1Q9ULL1 1385 aa24.08■■□□□ 1.45
DNMT3A-215ENST00000496570 NUTM2DQ5VT03 806 aaPredicted RBP24.05■■□□□ 1.44
DNMT3A-215ENST00000496570 KIF1BO60333 1816 aa24.05■■□□□ 1.44
DNMT3A-215ENST00000496570 SLC26A8Q96RN1 970 aa24.04■■□□□ 1.44
DNMT3A-215ENST00000496570 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.03■■□□□ 1.44
DNMT3A-215ENST00000496570 NEXMIFQ5QGS0 1516 aa24.03■■□□□ 1.44
DNMT3A-215ENST00000496570 LRRC7Q96NW7 1537 aa24.03■■□□□ 1.44
DNMT3A-215ENST00000496570 ACIN1Q9UKV3 1341 aaKnown RBP24.03■■□□□ 1.44
DNMT3A-215ENST00000496570 ADAMTS13Q76LX8 1427 aa24.02■■□□□ 1.44
DNMT3A-215ENST00000496570 HDGFP51858 240 aaKnown RBP24.01■■□□□ 1.43
DNMT3A-215ENST00000496570 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
DNMT3A-215ENST00000496570 PPP1R15AO75807 674 aaPredicted RBP24■■□□□ 1.43
DNMT3A-215ENST00000496570 NRXN3Q9Y4C0 1643 aa23.99■■□□□ 1.43
DNMT3A-215ENST00000496570 HRCP23327 699 aa23.99■■□□□ 1.43
DNMT3A-215ENST00000496570 NWD1Q149M9 1564 aa23.99■■□□□ 1.43
DNMT3A-215ENST00000496570 XIRP1Q702N8 1843 aaKnown RBP23.97■■□□□ 1.43
DNMT3A-215ENST00000496570 ALKQ9UM73 1620 aa23.96■■□□□ 1.43
DNMT3A-215ENST00000496570 SETBP1Q9Y6X0 1596 aa23.96■■□□□ 1.43
DNMT3A-215ENST00000496570 ZNF326Q5BKZ1 582 aaKnown RBP23.96■■□□□ 1.43
DNMT3A-215ENST00000496570 DIP2AQ14689 1571 aa23.95■■□□□ 1.43
DNMT3A-215ENST00000496570 KCNA6P17658 529 aa23.95■■□□□ 1.42
DNMT3A-215ENST00000496570 TBX22Q9Y458 520 aa23.95■■□□□ 1.42
DNMT3A-215ENST00000496570 CHD2O14647 1828 aaKnown RBP23.95■■□□□ 1.42
DNMT3A-215ENST00000496570 CCDC144AA2RUR9 1427 aa23.94■■□□□ 1.42
DNMT3A-215ENST00000496570 SPATA31E1Q6ZUB1 1445 aa23.94■■□□□ 1.42
DNMT3A-215ENST00000496570 BCANQ96GW7 911 aa23.93■■□□□ 1.42
DNMT3A-215ENST00000496570 PPLO60437 1756 aa23.92■■□□□ 1.42
DNMT3A-215ENST00000496570 NKTRP30414 1462 aaKnown RBP23.9■■□□□ 1.42
DNMT3A-215ENST00000496570 UBAP1LF5GYI3 381 aa23.89■■□□□ 1.41
DNMT3A-215ENST00000496570 RPGRIP1LQ68CZ1 1315 aa23.88■■□□□ 1.41
DNMT3A-215ENST00000496570 PTPRUQ92729 1446 aa23.88■■□□□ 1.41
DNMT3A-215ENST00000496570 ANKRD30BQ9BXX2 1392 aa23.88■■□□□ 1.41
DNMT3A-215ENST00000496570 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
DNMT3A-215ENST00000496570 IFT172Q9UG01 1749 aa23.87■■□□□ 1.41
DNMT3A-215ENST00000496570 TMEM94Q12767 1356 aa23.86■■□□□ 1.41
DNMT3A-215ENST00000496570 SETD1AO15047 1707 aaKnown RBP23.85■■□□□ 1.41
DNMT3A-215ENST00000496570 METP08581 1390 aa23.84■■□□□ 1.41
DNMT3A-215ENST00000496570 RBM33Q96EV2 1170 aaKnown RBP23.83■■□□□ 1.41
DNMT3A-215ENST00000496570 XRN1Q8IZH2 1706 aaKnown RBP23.83■■□□□ 1.41
DNMT3A-215ENST00000496570 VGFO15240 615 aaPredicted RBP23.82■■□□□ 1.4
DNMT3A-215ENST00000496570 PROSER2Q86WR7 435 aaPredicted RBP23.82■■□□□ 1.4
DNMT3A-215ENST00000496570 RGL3Q3MIN7 710 aa23.81■■□□□ 1.4
DNMT3A-215ENST00000496570 TOM1O60784 492 aa23.79■■□□□ 1.4
DNMT3A-215ENST00000496570 ADGRF5Q8IZF2 1346 aa23.79■■□□□ 1.4
DNMT3A-215ENST00000496570 AMOTL2Q9Y2J4 779 aa23.78■■□□□ 1.4
DNMT3A-215ENST00000496570 PIP4K2BP78356 416 aa23.75■■□□□ 1.39
DNMT3A-215ENST00000496570 NCOA3Q9Y6Q9 1424 aa23.74■■□□□ 1.39
DNMT3A-215ENST00000496570 PIK3C2GO75747 1445 aa23.73■■□□□ 1.39
DNMT3A-215ENST00000496570 NRXN1Q9ULB1 1477 aa23.73■■□□□ 1.39
DNMT3A-215ENST00000496570 MYOM2P54296 1465 aa23.71■■□□□ 1.39
DNMT3A-215ENST00000496570 ASXL1Q8IXJ9 1541 aa23.69■■□□□ 1.38
DNMT3A-215ENST00000496570 PRAG1Q86YV5 1406 aa23.69■■□□□ 1.38
DNMT3A-215ENST00000496570 MSH6P52701 1360 aa23.68■■□□□ 1.38
DNMT3A-215ENST00000496570 SCAF1Q9H7N4 1312 aaKnown RBP23.68■■□□□ 1.38
DNMT3A-215ENST00000496570 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.67■■□□□ 1.38
DNMT3A-215ENST00000496570 TRIM26Q12899 539 aaPredicted RBP23.67■■□□□ 1.38
DNMT3A-215ENST00000496570 HSPA1LP34931 641 aa23.66■■□□□ 1.38
DNMT3A-215ENST00000496570 PTCH1Q13635 1447 aa23.66■■□□□ 1.38
DNMT3A-215ENST00000496570 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
DNMT3A-215ENST00000496570 ROBO2Q9HCK4 1378 aa23.65■■□□□ 1.38
DNMT3A-215ENST00000496570 FAM135BQ49AJ0 1406 aa23.63■■□□□ 1.37
DNMT3A-215ENST00000496570 C19orf44Q9H6X5 657 aa23.62■■□□□ 1.37
DNMT3A-215ENST00000496570 NALCNQ8IZF0 1738 aa23.62■■□□□ 1.37
DNMT3A-215ENST00000496570 ROBO1Q9Y6N7 1651 aa23.61■■□□□ 1.37
DNMT3A-215ENST00000496570 C14orf93Q9H972 538 aaKnown RBP23.61■■□□□ 1.37
DNMT3A-215ENST00000496570 TECPR2O15040 1411 aa23.59■■□□□ 1.37
DNMT3A-215ENST00000496570 ADGRL3Q9HAR2 1447 aa23.59■■□□□ 1.37
DNMT3A-215ENST00000496570 SLAIN2Q9P270 581 aa23.59■■□□□ 1.37
DNMT3A-215ENST00000496570 LAMC1P11047 1609 aa23.59■■□□□ 1.37
DNMT3A-215ENST00000496570 DCCP43146 1447 aa23.59■■□□□ 1.37
DNMT3A-215ENST00000496570 LRPPRCP42704 1394 aaKnown RBP23.58■■□□□ 1.37
DNMT3A-215ENST00000496570 CFAP70Q5T0N1 1121 aa23.58■■□□□ 1.37
DNMT3A-215ENST00000496570 TMEM132EQ6IEE7 984 aa23.58■■□□□ 1.37
DNMT3A-215ENST00000496570 C14orf37Q86TY3 774 aa23.58■■□□□ 1.37
DNMT3A-215ENST00000496570 KNDC1Q76NI1 1749 aa23.58■■□□□ 1.37
DNMT3A-215ENST00000496570 DCAF11Q8TEB1 546 aa23.57■■□□□ 1.36
DNMT3A-215ENST00000496570 ABCC11Q96J66 1382 aa23.55■■□□□ 1.36
DNMT3A-215ENST00000496570 YTHDC2Q9H6S0 1430 aaKnown RBP23.55■■□□□ 1.36
DNMT3A-215ENST00000496570 ADGRB1O14514 1584 aa23.54■■□□□ 1.36
DNMT3A-215ENST00000496570 CADPS2Q86UW7 1296 aa23.54■■□□□ 1.36
DNMT3A-215ENST00000496570 MST1RQ04912 1400 aa23.53■■□□□ 1.36
DNMT3A-215ENST00000496570 KDM2AQ9Y2K7 1162 aa23.53■■□□□ 1.36
DNMT3A-215ENST00000496570 ATF3P18847 181 aa23.52■■□□□ 1.36
DNMT3A-215ENST00000496570 STAC3Q96MF2 364 aa23.52■■□□□ 1.36
DNMT3A-215ENST00000496570 STK26Q9P289 416 aa23.52■■□□□ 1.36
DNMT3A-215ENST00000496570 PLEKHH1Q9ULM0 1364 aa23.51■■□□□ 1.35
DNMT3A-215ENST00000496570 SIN3AQ96ST3 1273 aa23.5■■□□□ 1.35
DNMT3A-215ENST00000496570 WAPLQ7Z5K2 1190 aa23.48■■□□□ 1.35
DNMT3A-215ENST00000496570 CDC42BPGQ6DT37 1551 aa23.45■■□□□ 1.34
DNMT3A-215ENST00000496570 BRINP3Q76B58 766 aa23.45■■□□□ 1.34
DNMT3A-215ENST00000496570 SIRT1Q96EB6 747 aa23.45■■□□□ 1.34
DNMT3A-215ENST00000496570 PHLPP1O60346 1717 aa23.45■■□□□ 1.34
DNMT3A-215ENST00000496570 AHDC1Q5TGY3 1603 aaPredicted RBP23.44■■□□□ 1.34
DNMT3A-215ENST00000496570 DLC1Q96QB1 1528 aa23.44■■□□□ 1.34
DNMT3A-215ENST00000496570 COL16A1Q07092 1604 aaPredicted RBP23.44■■□□□ 1.34
DNMT3A-215ENST00000496570 C1orf167Q5SNV9 1468 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms