RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 SLC4A1APQ9BWU0 796 aaKnown RBP26.31■■□□□ 1.8
RHBDD3-207ENST00000496342 FOXD1Q16676 465 aa26.29■■□□□ 1.8
RHBDD3-207ENST00000496342 NUTM2DQ5VT03 806 aaPredicted RBP26.28■■□□□ 1.8
RHBDD3-207ENST00000496342 CPS1P31327 1500 aa26.28■■□□□ 1.8
RHBDD3-207ENST00000496342 RAB3GAP2Q9H2M9 1393 aa26.27■■□□□ 1.8
RHBDD3-207ENST00000496342 IQSEC2Q5JU85 1478 aa26.25■■□□□ 1.79
RHBDD3-207ENST00000496342 XIRP1Q702N8 1843 aaKnown RBP26.24■■□□□ 1.79
RHBDD3-207ENST00000496342 SLC26A8Q96RN1 970 aa26.23■■□□□ 1.79
RHBDD3-207ENST00000496342 PPP1R15AO75807 674 aaPredicted RBP26.21■■□□□ 1.79
RHBDD3-207ENST00000496342 MPHOSPH9Q99550 1183 aa26.2■■□□□ 1.78
RHBDD3-207ENST00000496342 PLEKHG1Q9ULL1 1385 aa26.2■■□□□ 1.78
RHBDD3-207ENST00000496342 NEXMIFQ5QGS0 1516 aa26.19■■□□□ 1.78
RHBDD3-207ENST00000496342 BCANQ96GW7 911 aa26.19■■□□□ 1.78
RHBDD3-207ENST00000496342 LRRC7Q96NW7 1537 aa26.19■■□□□ 1.78
RHBDD3-207ENST00000496342 NRXN3Q9Y4C0 1643 aa26.18■■□□□ 1.78
RHBDD3-207ENST00000496342 CHD2O14647 1828 aaKnown RBP26.17■■□□□ 1.78
RHBDD3-207ENST00000496342 ZNF326Q5BKZ1 582 aaKnown RBP26.16■■□□□ 1.78
RHBDD3-207ENST00000496342 NWD1Q149M9 1564 aa26.16■■□□□ 1.78
RHBDD3-207ENST00000496342 PPLO60437 1756 aa26.15■■□□□ 1.78
RHBDD3-207ENST00000496342 ADAMTS13Q76LX8 1427 aa26.14■■□□□ 1.78
RHBDD3-207ENST00000496342 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.12■■□□□ 1.77
RHBDD3-207ENST00000496342 ALKQ9UM73 1620 aa26.11■■□□□ 1.77
RHBDD3-207ENST00000496342 UBAP1LF5GYI3 381 aa26.1■■□□□ 1.77
RHBDD3-207ENST00000496342 HDGFP51858 240 aaKnown RBP26.1■■□□□ 1.77
RHBDD3-207ENST00000496342 DIP2AQ14689 1571 aa26.1■■□□□ 1.77
RHBDD3-207ENST00000496342 IFT172Q9UG01 1749 aa26.08■■□□□ 1.77
RHBDD3-207ENST00000496342 SETBP1Q9Y6X0 1596 aa26.08■■□□□ 1.77
RHBDD3-207ENST00000496342 CCDC144AA2RUR9 1427 aa26.08■■□□□ 1.77
RHBDD3-207ENST00000496342 RBM33Q96EV2 1170 aaKnown RBP26.06■■□□□ 1.76
RHBDD3-207ENST00000496342 KCNA6P17658 529 aa26.05■■□□□ 1.76
RHBDD3-207ENST00000496342 SETD1AO15047 1707 aaKnown RBP26.05■■□□□ 1.76
RHBDD3-207ENST00000496342 NKTRP30414 1462 aaKnown RBP26.04■■□□□ 1.76
RHBDD3-207ENST00000496342 SPATA31E1Q6ZUB1 1445 aa26.02■■□□□ 1.76
RHBDD3-207ENST00000496342 TMEM94Q12767 1356 aa26.01■■□□□ 1.75
RHBDD3-207ENST00000496342 PTPRUQ92729 1446 aa26.01■■□□□ 1.75
RHBDD3-207ENST00000496342 TBX22Q9Y458 520 aa26.01■■□□□ 1.75
RHBDD3-207ENST00000496342 XRN1Q8IZH2 1706 aaKnown RBP26■■□□□ 1.75
RHBDD3-207ENST00000496342 ACIN1Q9UKV3 1341 aaKnown RBP25.99■■□□□ 1.75
RHBDD3-207ENST00000496342 SCAF1Q9H7N4 1312 aaKnown RBP25.98■■□□□ 1.75
RHBDD3-207ENST00000496342 PIP4K2BP78356 416 aa25.98■■□□□ 1.75
RHBDD3-207ENST00000496342 RGL3Q3MIN7 710 aa25.97■■□□□ 1.75
RHBDD3-207ENST00000496342 PROSER2Q86WR7 435 aaPredicted RBP25.97■■□□□ 1.75
RHBDD3-207ENST00000496342 METP08581 1390 aa25.95■■□□□ 1.75
RHBDD3-207ENST00000496342 TOM1O60784 492 aa25.93■■□□□ 1.74
RHBDD3-207ENST00000496342 ANKRD30BQ9BXX2 1392 aa25.93■■□□□ 1.74
RHBDD3-207ENST00000496342 HRCP23327 699 aa25.92■■□□□ 1.74
RHBDD3-207ENST00000496342 PIK3R4Q99570 1358 aa25.92■■□□□ 1.74
RHBDD3-207ENST00000496342 RPGRIP1LQ68CZ1 1315 aa25.91■■□□□ 1.74
RHBDD3-207ENST00000496342 ADGRF5Q8IZF2 1346 aa25.89■■□□□ 1.74
RHBDD3-207ENST00000496342 AMOTL2Q9Y2J4 779 aa25.89■■□□□ 1.74
RHBDD3-207ENST00000496342 VGFO15240 615 aaPredicted RBP25.88■■□□□ 1.73
RHBDD3-207ENST00000496342 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.88■■□□□ 1.73
RHBDD3-207ENST00000496342 NALCNQ8IZF0 1738 aa25.85■■□□□ 1.73
RHBDD3-207ENST00000496342 ASXL1Q8IXJ9 1541 aa25.84■■□□□ 1.73
RHBDD3-207ENST00000496342 ROBO1Q9Y6N7 1651 aa25.83■■□□□ 1.73
RHBDD3-207ENST00000496342 MSH6P52701 1360 aa25.82■■□□□ 1.72
RHBDD3-207ENST00000496342 HSPA1LP34931 641 aa25.81■■□□□ 1.72
RHBDD3-207ENST00000496342 PIK3C2GO75747 1445 aa25.8■■□□□ 1.72
RHBDD3-207ENST00000496342 MYOM2P54296 1465 aa25.79■■□□□ 1.72
RHBDD3-207ENST00000496342 C14orf37Q86TY3 774 aa25.79■■□□□ 1.72
RHBDD3-207ENST00000496342 NRXN1Q9ULB1 1477 aa25.77■■□□□ 1.72
RHBDD3-207ENST00000496342 KNDC1Q76NI1 1749 aa25.75■■□□□ 1.71
RHBDD3-207ENST00000496342 NCOA3Q9Y6Q9 1424 aa25.75■■□□□ 1.71
RHBDD3-207ENST00000496342 LAMC1P11047 1609 aa25.74■■□□□ 1.71
RHBDD3-207ENST00000496342 ROBO2Q9HCK4 1378 aa25.74■■□□□ 1.71
RHBDD3-207ENST00000496342 PTCH1Q13635 1447 aa25.73■■□□□ 1.71
RHBDD3-207ENST00000496342 TRIM26Q12899 539 aaPredicted RBP25.71■■□□□ 1.71
RHBDD3-207ENST00000496342 TMEM132EQ6IEE7 984 aa25.71■■□□□ 1.71
RHBDD3-207ENST00000496342 PRAG1Q86YV5 1406 aa25.7■■□□□ 1.7
RHBDD3-207ENST00000496342 ADGRL3Q9HAR2 1447 aa25.7■■□□□ 1.7
RHBDD3-207ENST00000496342 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
RHBDD3-207ENST00000496342 KDM2AQ9Y2K7 1162 aa25.69■■□□□ 1.7
RHBDD3-207ENST00000496342 FAM135BQ49AJ0 1406 aa25.69■■□□□ 1.7
RHBDD3-207ENST00000496342 PHLPP1O60346 1717 aa25.68■■□□□ 1.7
RHBDD3-207ENST00000496342 C19orf44Q9H6X5 657 aa25.68■■□□□ 1.7
RHBDD3-207ENST00000496342 STK26Q9P289 416 aa25.68■■□□□ 1.7
RHBDD3-207ENST00000496342 CFAP70Q5T0N1 1121 aa25.67■■□□□ 1.7
RHBDD3-207ENST00000496342 DCAF11Q8TEB1 546 aa25.66■■□□□ 1.7
RHBDD3-207ENST00000496342 SLAIN2Q9P270 581 aa25.66■■□□□ 1.7
RHBDD3-207ENST00000496342 DCCP43146 1447 aa25.64■■□□□ 1.7
RHBDD3-207ENST00000496342 YTHDC2Q9H6S0 1430 aaKnown RBP25.64■■□□□ 1.7
RHBDD3-207ENST00000496342 ATF3P18847 181 aa25.64■■□□□ 1.7
RHBDD3-207ENST00000496342 LRPPRCP42704 1394 aaKnown RBP25.64■■□□□ 1.69
RHBDD3-207ENST00000496342 TECPR2O15040 1411 aa25.63■■□□□ 1.69
RHBDD3-207ENST00000496342 MST1RQ04912 1400 aa25.63■■□□□ 1.69
RHBDD3-207ENST00000496342 C14orf93Q9H972 538 aaKnown RBP25.63■■□□□ 1.69
RHBDD3-207ENST00000496342 ADGRB1O14514 1584 aa25.62■■□□□ 1.69
RHBDD3-207ENST00000496342 PLEKHH1Q9ULM0 1364 aa25.62■■□□□ 1.69
RHBDD3-207ENST00000496342 CADPS2Q86UW7 1296 aa25.62■■□□□ 1.69
RHBDD3-207ENST00000496342 MED1Q15648 1581 aaPredicted RBP25.61■■□□□ 1.69
RHBDD3-207ENST00000496342 COL16A1Q07092 1604 aaPredicted RBP25.59■■□□□ 1.69
RHBDD3-207ENST00000496342 WAPLQ7Z5K2 1190 aa25.59■■□□□ 1.69
RHBDD3-207ENST00000496342 SIN3AQ96ST3 1273 aa25.59■■□□□ 1.69
RHBDD3-207ENST00000496342 ABCC11Q96J66 1382 aa25.57■■□□□ 1.68
RHBDD3-207ENST00000496342 CDC42BPGQ6DT37 1551 aa25.56■■□□□ 1.68
RHBDD3-207ENST00000496342 NHSL1Q5SYE7 1610 aa25.56■■□□□ 1.68
RHBDD3-207ENST00000496342 AHDC1Q5TGY3 1603 aaPredicted RBP25.55■■□□□ 1.68
RHBDD3-207ENST00000496342 DISP3Q9P2K9 1392 aa25.55■■□□□ 1.68
RHBDD3-207ENST00000496342 BRINP3Q76B58 766 aa25.54■■□□□ 1.68
RHBDD3-207ENST00000496342 ARHGEF28Q8N1W1 1705 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms