RNA–Protein interactions for RNA: ENST00000496327.1

CNOT3-207, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-207ENST00000496327 PPP1R15AO75807 674 aaPredicted RBP24.56■■□□□ 1.52
CNOT3-207ENST00000496327 ZNF326Q5BKZ1 582 aaKnown RBP24.56■■□□□ 1.52
CNOT3-207ENST00000496327 IQGAP1P46940 1657 aa24.53■■□□□ 1.52
CNOT3-207ENST00000496327 ANKRD30BQ9BXX2 1392 aa24.53■■□□□ 1.52
CNOT3-207ENST00000496327 PLEKHG1Q9ULL1 1385 aa24.52■■□□□ 1.52
CNOT3-207ENST00000496327 ZNF335Q9H4Z2 1342 aaPredicted RBP24.51■■□□□ 1.51
CNOT3-207ENST00000496327 MYO5BQ9ULV0 1848 aa24.51■■□□□ 1.51
CNOT3-207ENST00000496327 NUTM2DQ5VT03 806 aaPredicted RBP24.5■■□□□ 1.51
CNOT3-207ENST00000496327 BCANQ96GW7 911 aa24.49■■□□□ 1.51
CNOT3-207ENST00000496327 RPGRIP1LQ68CZ1 1315 aa24.48■■□□□ 1.51
CNOT3-207ENST00000496327 SPATA31E1Q6ZUB1 1445 aa24.47■■□□□ 1.51
CNOT3-207ENST00000496327 KIF1BO60333 1816 aa24.47■■□□□ 1.51
CNOT3-207ENST00000496327 NEXMIFQ5QGS0 1516 aa24.45■■□□□ 1.51
CNOT3-207ENST00000496327 SLC26A8Q96RN1 970 aa24.45■■□□□ 1.5
CNOT3-207ENST00000496327 LTBP4Q8N2S1 1624 aa24.45■■□□□ 1.5
CNOT3-207ENST00000496327 RGL3Q3MIN7 710 aa24.43■■□□□ 1.5
CNOT3-207ENST00000496327 SENP3Q9H4L4 574 aaPredicted RBP24.43■■□□□ 1.5
CNOT3-207ENST00000496327 CERKQ8TCT0 537 aa24.42■■□□□ 1.5
CNOT3-207ENST00000496327 VGFO15240 615 aaPredicted RBP24.41■■□□□ 1.5
CNOT3-207ENST00000496327 TBX22Q9Y458 520 aa24.4■■□□□ 1.5
CNOT3-207ENST00000496327 ADAMTS13Q76LX8 1427 aa24.39■■□□□ 1.5
CNOT3-207ENST00000496327 PCGF6Q9BYE7 350 aa24.39■■□□□ 1.49
CNOT3-207ENST00000496327 CPS1P31327 1500 aa24.38■■□□□ 1.49
CNOT3-207ENST00000496327 DHX57Q6P158 1386 aaKnown RBP24.38■■□□□ 1.49
CNOT3-207ENST00000496327 DIP2AQ14689 1571 aa24.36■■□□□ 1.49
CNOT3-207ENST00000496327 SETBP1Q9Y6X0 1596 aa24.36■■□□□ 1.49
CNOT3-207ENST00000496327 KCNA6P17658 529 aa24.34■■□□□ 1.49
CNOT3-207ENST00000496327 PIK3R4Q99570 1358 aa24.32■■□□□ 1.48
CNOT3-207ENST00000496327 IQSEC2Q5JU85 1478 aa24.31■■□□□ 1.48
CNOT3-207ENST00000496327 ADGRF5Q8IZF2 1346 aa24.31■■□□□ 1.48
CNOT3-207ENST00000496327 PPLO60437 1756 aa24.29■■□□□ 1.48
CNOT3-207ENST00000496327 NRXN3Q9Y4C0 1643 aa24.29■■□□□ 1.48
CNOT3-207ENST00000496327 NWD1Q149M9 1564 aa24.27■■□□□ 1.48
CNOT3-207ENST00000496327 NKTRP30414 1462 aaKnown RBP24.26■■□□□ 1.47
CNOT3-207ENST00000496327 MYOM2P54296 1465 aa24.26■■□□□ 1.47
CNOT3-207ENST00000496327 LRRC7Q96NW7 1537 aa24.26■■□□□ 1.47
CNOT3-207ENST00000496327 STRCP1A6NGW2 1772 aa24.25■■□□□ 1.47
CNOT3-207ENST00000496327 METP08581 1390 aa24.25■■□□□ 1.47
CNOT3-207ENST00000496327 IFT172Q9UG01 1749 aa24.24■■□□□ 1.47
CNOT3-207ENST00000496327 STAC3Q96MF2 364 aa24.24■■□□□ 1.47
CNOT3-207ENST00000496327 PIK3C2GO75747 1445 aa24.24■■□□□ 1.47
CNOT3-207ENST00000496327 DCAF11Q8TEB1 546 aa24.23■■□□□ 1.47
CNOT3-207ENST00000496327 FBXO41Q8TF61 875 aa24.23■■□□□ 1.47
CNOT3-207ENST00000496327 PTPRUQ92729 1446 aa24.23■■□□□ 1.47
CNOT3-207ENST00000496327 ALKQ9UM73 1620 aa24.22■■□□□ 1.47
CNOT3-207ENST00000496327 NRXN1Q9ULB1 1477 aa24.22■■□□□ 1.47
CNOT3-207ENST00000496327 PROSER2Q86WR7 435 aaPredicted RBP24.22■■□□□ 1.47
CNOT3-207ENST00000496327 SIN3AQ96ST3 1273 aa24.22■■□□□ 1.47
CNOT3-207ENST00000496327 AMOTL2Q9Y2J4 779 aa24.22■■□□□ 1.47
CNOT3-207ENST00000496327 TMEM94Q12767 1356 aa24.2■■□□□ 1.46
CNOT3-207ENST00000496327 KDM2AQ9Y2K7 1162 aa24.2■■□□□ 1.46
CNOT3-207ENST00000496327 NEUROD1Q13562 356 aa24.18■■□□□ 1.46
CNOT3-207ENST00000496327 CHD2O14647 1828 aaKnown RBP24.17■■□□□ 1.46
CNOT3-207ENST00000496327 C14orf93Q9H972 538 aaKnown RBP24.17■■□□□ 1.46
CNOT3-207ENST00000496327 UBAP1LF5GYI3 381 aa24.14■■□□□ 1.45
CNOT3-207ENST00000496327 SETD1AO15047 1707 aaKnown RBP24.14■■□□□ 1.45
CNOT3-207ENST00000496327 RBM33Q96EV2 1170 aaKnown RBP24.14■■□□□ 1.45
CNOT3-207ENST00000496327 XRN1Q8IZH2 1706 aaKnown RBP24.13■■□□□ 1.45
CNOT3-207ENST00000496327 CFAP70Q5T0N1 1121 aa24.13■■□□□ 1.45
CNOT3-207ENST00000496327 NCOA3Q9Y6Q9 1424 aa24.12■■□□□ 1.45
CNOT3-207ENST00000496327 PRAG1Q86YV5 1406 aa24.11■■□□□ 1.45
CNOT3-207ENST00000496327 TOM1O60784 492 aa24.11■■□□□ 1.45
CNOT3-207ENST00000496327 ILDR1Q86SU0 546 aaPredicted RBP24.11■■□□□ 1.45
CNOT3-207ENST00000496327 L3MBTL2Q969R5 705 aa24.11■■□□□ 1.45
CNOT3-207ENST00000496327 PTCH1Q13635 1447 aa24.1■■□□□ 1.45
CNOT3-207ENST00000496327 TMEM132EQ6IEE7 984 aa24.1■■□□□ 1.45
CNOT3-207ENST00000496327 LRPPRCP42704 1394 aaKnown RBP24.1■■□□□ 1.45
CNOT3-207ENST00000496327 ASXL1Q8IXJ9 1541 aa24.1■■□□□ 1.45
CNOT3-207ENST00000496327 MSH6P52701 1360 aa24.08■■□□□ 1.45
CNOT3-207ENST00000496327 C14orf37Q86TY3 774 aa24.08■■□□□ 1.45
CNOT3-207ENST00000496327 LAMC1P11047 1609 aa24.08■■□□□ 1.45
CNOT3-207ENST00000496327 ABCC11Q96J66 1382 aa24.06■■□□□ 1.44
CNOT3-207ENST00000496327 ROBO2Q9HCK4 1378 aa24.06■■□□□ 1.44
CNOT3-207ENST00000496327 STK26Q9P289 416 aa24.06■■□□□ 1.44
CNOT3-207ENST00000496327 YTHDC2Q9H6S0 1430 aaKnown RBP24.06■■□□□ 1.44
CNOT3-207ENST00000496327 TECPR2O15040 1411 aa24.05■■□□□ 1.44
CNOT3-207ENST00000496327 CLSPNQ9HAW4 1339 aa24.05■■□□□ 1.44
CNOT3-207ENST00000496327 TONSLQ96HA7 1378 aa24.04■■□□□ 1.44
CNOT3-207ENST00000496327 C19orf44Q9H6X5 657 aa24.03■■□□□ 1.44
CNOT3-207ENST00000496327 XIRP1Q702N8 1843 aaKnown RBP24.03■■□□□ 1.44
CNOT3-207ENST00000496327 ADGRB1O14514 1584 aa24.01■■□□□ 1.43
CNOT3-207ENST00000496327 PIP4K2BP78356 416 aa24■■□□□ 1.43
CNOT3-207ENST00000496327 SCAF1Q9H7N4 1312 aaKnown RBP24■■□□□ 1.43
CNOT3-207ENST00000496327 ADGRL3Q9HAR2 1447 aa24■■□□□ 1.43
CNOT3-207ENST00000496327 CCER1Q8TC90 406 aaPredicted RBP23.99■■□□□ 1.43
CNOT3-207ENST00000496327 ATF3P18847 181 aa23.98■■□□□ 1.43
CNOT3-207ENST00000496327 CADPS2Q86UW7 1296 aa23.98■■□□□ 1.43
CNOT3-207ENST00000496327 SIRT1Q96EB6 747 aa23.98■■□□□ 1.43
CNOT3-207ENST00000496327 DCCP43146 1447 aa23.97■■□□□ 1.43
CNOT3-207ENST00000496327 FAM135BQ49AJ0 1406 aa23.97■■□□□ 1.43
CNOT3-207ENST00000496327 WAPLQ7Z5K2 1190 aa23.96■■□□□ 1.43
CNOT3-207ENST00000496327 KNDC1Q76NI1 1749 aa23.96■■□□□ 1.43
CNOT3-207ENST00000496327 DLC1Q96QB1 1528 aa23.94■■□□□ 1.42
CNOT3-207ENST00000496327 PLEKHH1Q9ULM0 1364 aa23.93■■□□□ 1.42
CNOT3-207ENST00000496327 TRAK1Q9UPV9 953 aa23.93■■□□□ 1.42
CNOT3-207ENST00000496327 NBPF1Q3BBV0 1214 aa23.92■■□□□ 1.42
CNOT3-207ENST00000496327 PRAM1Q96QH2 718 aa23.92■■□□□ 1.42
CNOT3-207ENST00000496327 SLAIN2Q9P270 581 aa23.92■■□□□ 1.42
CNOT3-207ENST00000496327 KIAA1210Q9ULL0 1709 aa23.92■■□□□ 1.42
CNOT3-207ENST00000496327 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms