RNA–Protein interactions for RNA: ENST00000496314.1

TSC22D1-209, Transcript of TSC22 domain family member 1, humanhuman

TSL 2

Gene TSC22D1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-209ENST00000496314 NUTM2DQ5VT03 806 aaPredicted RBP38.72■■■■□ 3.79
TSC22D1-209ENST00000496314 ANKRD30BQ9BXX2 1392 aa38.71■■■■□ 3.79
TSC22D1-209ENST00000496314 NEURL4Q96JN8 1562 aa38.71■■■■□ 3.79
TSC22D1-209ENST00000496314 NPHP4O75161 1426 aaPredicted RBP38.69■■■■□ 3.78
TSC22D1-209ENST00000496314 HDGFP51858 240 aaKnown RBP38.67■■■■□ 3.78
TSC22D1-209ENST00000496314 BCANQ96GW7 911 aa38.67■■■■□ 3.78
TSC22D1-209ENST00000496314 RGL3Q3MIN7 710 aa38.65■■■■□ 3.78
TSC22D1-209ENST00000496314 DHX57Q6P158 1386 aaKnown RBP38.65■■■■□ 3.78
TSC22D1-209ENST00000496314 ZFYVE9O95405 1425 aa38.64■■■■□ 3.78
TSC22D1-209ENST00000496314 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.63■■■■□ 3.77
TSC22D1-209ENST00000496314 IQGAP1P46940 1657 aa38.62■■■■□ 3.77
TSC22D1-209ENST00000496314 MED14O60244 1454 aa38.6■■■■□ 3.77
TSC22D1-209ENST00000496314 SPATA31E1Q6ZUB1 1445 aa38.55■■■■□ 3.76
TSC22D1-209ENST00000496314 NEXMIFQ5QGS0 1516 aa38.54■■■■□ 3.76
TSC22D1-209ENST00000496314 PLEKHG1Q9ULL1 1385 aa38.51■■■■□ 3.76
TSC22D1-209ENST00000496314 RPGRIP1LQ68CZ1 1315 aa38.49■■■■□ 3.75
TSC22D1-209ENST00000496314 SLC26A8Q96RN1 970 aa38.49■■■■□ 3.75
TSC22D1-209ENST00000496314 PPLO60437 1756 aa38.44■■■■□ 3.74
TSC22D1-209ENST00000496314 ZNF335Q9H4Z2 1342 aaPredicted RBP38.44■■■■□ 3.74
TSC22D1-209ENST00000496314 VGFO15240 615 aaPredicted RBP38.43■■■■□ 3.74
TSC22D1-209ENST00000496314 NEUROD1Q13562 356 aa38.43■■■■□ 3.74
TSC22D1-209ENST00000496314 SIN3AQ96ST3 1273 aa38.43■■■■□ 3.74
TSC22D1-209ENST00000496314 IFT172Q9UG01 1749 aa38.36■■■■□ 3.73
TSC22D1-209ENST00000496314 KDM2AQ9Y2K7 1162 aa38.35■■■■□ 3.73
TSC22D1-209ENST00000496314 ADGRF5Q8IZF2 1346 aa38.35■■■■□ 3.73
TSC22D1-209ENST00000496314 DCAF11Q8TEB1 546 aa38.33■■■■□ 3.73
TSC22D1-209ENST00000496314 ADAMTS13Q76LX8 1427 aa38.32■■■■□ 3.73
TSC22D1-209ENST00000496314 SETBP1Q9Y6X0 1596 aa38.31■■■■□ 3.72
TSC22D1-209ENST00000496314 NRXN3Q9Y4C0 1643 aa38.3■■■■□ 3.72
TSC22D1-209ENST00000496314 TBX22Q9Y458 520 aa38.29■■■■□ 3.72
TSC22D1-209ENST00000496314 DIP2AQ14689 1571 aa38.28■■■■□ 3.72
TSC22D1-209ENST00000496314 CCER1Q8TC90 406 aaPredicted RBP38.25■■■■□ 3.71
TSC22D1-209ENST00000496314 LTBP4Q8N2S1 1624 aa38.24■■■■□ 3.71
TSC22D1-209ENST00000496314 MYOM2P54296 1465 aa38.24■■■■□ 3.71
TSC22D1-209ENST00000496314 STRCP1A6NGW2 1772 aa38.19■■■■□ 3.7
TSC22D1-209ENST00000496314 ALKQ9UM73 1620 aa38.19■■■■□ 3.7
TSC22D1-209ENST00000496314 KCNA6P17658 529 aa38.18■■■■□ 3.7
TSC22D1-209ENST00000496314 PIK3C2GO75747 1445 aa38.18■■■■□ 3.7
TSC22D1-209ENST00000496314 CPS1P31327 1500 aa38.17■■■■□ 3.7
TSC22D1-209ENST00000496314 METP08581 1390 aa38.17■■■■□ 3.7
TSC22D1-209ENST00000496314 CERKQ8TCT0 537 aa38.16■■■■□ 3.7
TSC22D1-209ENST00000496314 L3MBTL2Q969R5 705 aa38.15■■■■□ 3.7
TSC22D1-209ENST00000496314 TONSLQ96HA7 1378 aa38.13■■■■□ 3.69
TSC22D1-209ENST00000496314 NRXN1Q9ULB1 1477 aa38.13■■■■□ 3.69
TSC22D1-209ENST00000496314 PIK3R4Q99570 1358 aa38.12■■■■□ 3.69
TSC22D1-209ENST00000496314 CHD2O14647 1828 aaKnown RBP38.11■■■■□ 3.69
TSC22D1-209ENST00000496314 NWD1Q149M9 1564 aa38.1■■■■□ 3.69
TSC22D1-209ENST00000496314 AMOTL2Q9Y2J4 779 aa38.1■■■■□ 3.69
TSC22D1-209ENST00000496314 PTPRUQ92729 1446 aa38.1■■■■□ 3.69
TSC22D1-209ENST00000496314 SETD1AO15047 1707 aaKnown RBP38.09■■■■□ 3.69
TSC22D1-209ENST00000496314 CFAP70Q5T0N1 1121 aa38.09■■■■□ 3.69
TSC22D1-209ENST00000496314 STAC3Q96MF2 364 aa38.09■■■■□ 3.69
TSC22D1-209ENST00000496314 PROSER2Q86WR7 435 aaPredicted RBP38.08■■■■□ 3.69
TSC22D1-209ENST00000496314 RBM33Q96EV2 1170 aaKnown RBP38.06■■■■□ 3.68
TSC22D1-209ENST00000496314 TMEM132EQ6IEE7 984 aa38.05■■■■□ 3.68
TSC22D1-209ENST00000496314 LRRC7Q96NW7 1537 aa38.05■■■■□ 3.68
TSC22D1-209ENST00000496314 NKTRP30414 1462 aaKnown RBP38.04■■■■□ 3.68
TSC22D1-209ENST00000496314 C14orf93Q9H972 538 aaKnown RBP38.04■■■■□ 3.68
TSC22D1-209ENST00000496314 CLSPNQ9HAW4 1339 aa38.04■■■■□ 3.68
TSC22D1-209ENST00000496314 LAMC1P11047 1609 aa38.03■■■■□ 3.68
TSC22D1-209ENST00000496314 STK26Q9P289 416 aa38.02■■■■□ 3.68
TSC22D1-209ENST00000496314 XRN1Q8IZH2 1706 aaKnown RBP37.98■■■■□ 3.67
TSC22D1-209ENST00000496314 ASXL1Q8IXJ9 1541 aa37.98■■■■□ 3.67
TSC22D1-209ENST00000496314 TMEM94Q12767 1356 aa37.98■■■■□ 3.67
TSC22D1-209ENST00000496314 PRAG1Q86YV5 1406 aa37.97■■■■□ 3.67
TSC22D1-209ENST00000496314 C14orf37Q86TY3 774 aa37.96■■■■□ 3.67
TSC22D1-209ENST00000496314 IQSEC2Q5JU85 1478 aa37.91■■■■□ 3.66
TSC22D1-209ENST00000496314 LRPPRCP42704 1394 aaKnown RBP37.91■■■■□ 3.66
TSC22D1-209ENST00000496314 YTHDC2Q9H6S0 1430 aaKnown RBP37.9■■■■□ 3.66
TSC22D1-209ENST00000496314 XIRP1Q702N8 1843 aaKnown RBP37.88■■■■□ 3.65
TSC22D1-209ENST00000496314 ROBO2Q9HCK4 1378 aa37.87■■■■□ 3.65
TSC22D1-209ENST00000496314 PTCH1Q13635 1447 aa37.85■■■■□ 3.65
TSC22D1-209ENST00000496314 ADGRB1O14514 1584 aa37.85■■■■□ 3.65
TSC22D1-209ENST00000496314 UBAP1LF5GYI3 381 aa37.84■■■■□ 3.65
TSC22D1-209ENST00000496314 NBPF1Q3BBV0 1214 aa37.82■■■■□ 3.64
TSC22D1-209ENST00000496314 TRAK1Q9UPV9 953 aa37.82■■■■□ 3.64
TSC22D1-209ENST00000496314 MSH6P52701 1360 aa37.81■■■■□ 3.64
TSC22D1-209ENST00000496314 ABCC11Q96J66 1382 aa37.81■■■■□ 3.64
TSC22D1-209ENST00000496314 KIAA1210Q9ULL0 1709 aa37.81■■■■□ 3.64
TSC22D1-209ENST00000496314 NBPF8Q3BBV2 869 aa37.81■■■■□ 3.64
TSC22D1-209ENST00000496314 KNDC1Q76NI1 1749 aa37.8■■■■□ 3.64
TSC22D1-209ENST00000496314 WAPLQ7Z5K2 1190 aa37.78■■■■□ 3.64
TSC22D1-209ENST00000496314 TECPR2O15040 1411 aa37.78■■■■□ 3.64
TSC22D1-209ENST00000496314 TRPM1Q7Z4N2 1603 aa37.76■■■■□ 3.64
TSC22D1-209ENST00000496314 SCAF1Q9H7N4 1312 aaKnown RBP37.76■■■■□ 3.64
TSC22D1-209ENST00000496314 ROCK2O75116 1388 aaKnown RBP37.75■■■■□ 3.63
TSC22D1-209ENST00000496314 NCOA3Q9Y6Q9 1424 aa37.75■■■■□ 3.63
TSC22D1-209ENST00000496314 TOM1O60784 492 aa37.74■■■■□ 3.63
TSC22D1-209ENST00000496314 SAFB2Q14151 953 aaKnown RBP eCLIP37.74■■■■□ 3.63
TSC22D1-209ENST00000496314 PLEKHH1Q9ULM0 1364 aa37.73■■■■□ 3.63
TSC22D1-209ENST00000496314 POGKQ9P215 609 aa37.73■■■■□ 3.63
TSC22D1-209ENST00000496314 PIP4K2BP78356 416 aa37.72■■■■□ 3.63
TSC22D1-209ENST00000496314 FBXO41Q8TF61 875 aa37.72■■■■□ 3.63
TSC22D1-209ENST00000496314 PRAM1Q96QH2 718 aa37.72■■■■□ 3.63
TSC22D1-209ENST00000496314 TIMELESSQ9UNS1 1208 aa37.72■■■■□ 3.63
TSC22D1-209ENST00000496314 C19orf44Q9H6X5 657 aa37.7■■■■□ 3.63
TSC22D1-209ENST00000496314 ATF3P18847 181 aa37.69■■■■□ 3.62
TSC22D1-209ENST00000496314 NALCNQ8IZF0 1738 aa37.69■■■■□ 3.62
TSC22D1-209ENST00000496314 ADGRL3Q9HAR2 1447 aa37.69■■■■□ 3.62
TSC22D1-209ENST00000496314 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.67■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms